Cow genome map

Conread name: Spl1-SPL01B040095

Conread position: 41-334
Cow position: chr19:42768209-42767919 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 208
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 104, 18

Conread position: 82-304
Cow position: chr19:28447369-28447591 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 157
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 64, 92

Conread position: 83-223
Cow position: chr19:35742091-35742232 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 105
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 63, 0

Conread position: 83-261
Cow position: chr19:18786393-18786216 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 135
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 40, 92

Conread position: 83-261
Cow position: chr19:36059861-36060044 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 134
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 30, 168

Conread position: 83-264
Cow position: chr19:48744337-48744158 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 134
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 63, 99

Conread position: 83-275
Cow position: chr19:51230894-51230704 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 134
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 64, 27

Conread position: 83-288
Cow position: chr19:16567083-16567288 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 141
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 174, 144

Conread position: 83-300
Cow position: chr19:23394715-23394933 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 154
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 22, 36

Conread position: 83-304
Cow position: chr19:27612243-27612026 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 163
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 17, 165

Conread position: 83-304
Cow position: chr19:44144001-44143787 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 154
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 21, 33

Conread position: 83-319
Cow position: chr19:47185152-47184915 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 172
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 39, 24

Conread position: 83-324
Cow position: chr19:33913454-33913704 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 182
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 20, 0

Conread position: 83-333
Cow position: chr19:11560113-11559852 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 180
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 41, 0

Conread position: 83-333
Cow position: chr19:46454776-46455024 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 172
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 63, 161

Conread position: 83-334
Cow position: chr19:5185314-5185074 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 176
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 63, 22

Conread position: 83-334
Cow position: chr19:11646502-11646748 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 179
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 63, 27

Conread position: 83-338
Cow position: chr19:34287950-34288203 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 179
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 39, 149

Conread position: 83-342
Cow position: chr19:7637308-7637043 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 182
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 24, 0

Conread position: 83-342
Cow position: chr19:23784486-23784233 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 184
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 42, 27

Conread position: 83-343
Cow position: chr19:18129483-18129753 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 194
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 38, 30

Conread position: 83-345
Cow position: chr19:34166299-34166563 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 178
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 19, 63

Conread position: 83-346
Cow position: chr19:33575453-33575715 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 182
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 32, 27

Conread position: 83-348
Cow position: chr19:7668629-7668894 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 190
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 18, 101

Conread position: 83-353
Cow position: chr19:23832667-23832395 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 186
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 21, 197

Conread position: 83-356
Cow position: chr19:22043421-22043153 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 188
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 63, 24

Conread position: 84-288
Cow position: chr19:16105151-16104947 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 154
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 23, 162

Conread position: 86-243
Cow position: chr19:3834206-3834363 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 121
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 35, 30

Conread position: 86-273
Cow position: chr19:34758066-34757884 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 143
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 60, 14

Conread position: 86-274
Cow position: chr19:39485252-39485440 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 139
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 60, 119

Conread position: 86-304
Cow position: chr19:10545773-10545554 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 164
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 19, 35

Conread position: 86-327
Cow position: chr19:10213603-10213845 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 172
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 29, 163

Conread position: 86-335
Cow position: chr19:16621419-16621173 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 183
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 14, 32

Conread position: 86-370
Cow position: chr19:10186434-10186728 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 198
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 15, 99

Conread position: 87-315
Cow position: chr19:38500098-38500318 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 164
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 26, 97

Conread position: 87-324
Cow position: chr19:42517323-42517080 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 173
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 22, 0

Conread position: 87-335
Cow position: chr19:34420347-34420594 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 187
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 36, 56

Conread position: 87-348
Cow position: chr19:3621365-3621630 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 189
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 13, 31

Conread position: 87-369
Cow position: chr19:14632101-14631826 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 197
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 179, 20

Conread position: 88-265
Cow position: chr19:21199072-21199249 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 135
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 21, 31

Conread position: 88-304
Cow position: chr19:15719684-15719473 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 157
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 36, 157

Conread position: 88-333
Cow position: chr19:35107463-35107699 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 175
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 13, 57

Conread position: 89-273
Cow position: chr19:34001143-34001328 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 131
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 23, 33

Conread position: 89-346
Cow position: chr19:40127231-40126970 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 176
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 28, 34

Conread position: 89-349
Cow position: chr19:10238671-10238935 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 191
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 31, 20

Conread position: 89-349
Cow position: chr19:12052912-12052648 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 200
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 14, 32

Conread position: 89-349
Cow position: chr19:12067679-12067943 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 200
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 14, 32

Conread position: 89-349
Cow position: chr19:26057617-26057352 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 178
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 34, 162

Conread position: 90-290
Cow position: chr19:25035417-25035616 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 145
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 31, 20

Conread position: 90-316
Cow position: chr19:29368336-29368561 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 161
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 15, 91

Conread position: 90-316
Cow position: chr19:29625841-29626066 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 160
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 13, 91

Conread position: 90-327
Cow position: chr19:17972323-17972091 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 176
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 33, 43

Conread position: 91-328
Cow position: chr19:37067076-37067311 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 166
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 20, 161

Conread position: 91-354
Cow position: chr19:16096618-16096349 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 184
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 33, 0

Conread position: 93-326
Cow position: chr19:25763050-25763281 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 169
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 20, 92

Conread position: 94-243
Cow position: chr19:1854101-1853954 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 120
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 7, 25

Conread position: 94-265
Cow position: chr19:19489891-19489719 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 125
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 13, 25

Conread position: 94-333
Cow position: chr19:52187426-52187667 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 175
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 23, 65

Conread position: 95-273
Cow position: chr19:39057183-39057363 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 134
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 5, 18

Conread position: 95-316
Cow position: chr19:23087926-23088147 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 169
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 51, 22

Conread position: 98-278
Cow position: chr19:22438590-22438764 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 130
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 49, 140

Conread position: 99-273
Cow position: chr19:46094691-46094518 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 123
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 46, 149

Conread position: 99-335
Cow position: chr19:15092187-15091960 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 160
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 47, 59

Conread position: 101-342
Cow position: chr19:28810371-28810124 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 173
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 14, 0

Conread position: 105-274
Cow position: chr19:15887369-15887201 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 121
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 41, 140

Conread position: 107-273
Cow position: chr19:4587784-4587618 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 122
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 38, 10

Conread position: 108-342
Cow position: chr19:49221666-49221430 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 166
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 38, 5

Conread position: 110-349
Cow position: chr19:23756786-23756552 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 181
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 36, 135

Conread position: 112-334
Cow position: chr19:23378634-23378861 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 170
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 32, 0

Conread position: 113-347
Cow position: chr19:24005615-24005848 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 164
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 193, 11

Conread position: 114-349
Cow position: chr19:18054297-18054059 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 169
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 11, 132

Conread position: 120-226
Cow position: chr19:45396552-45396445 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 88
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 25, 0

Conread position: 120-243
Cow position: chr19:20670940-20670816 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 26, 0

Conread position: 120-274
Cow position: chr19:26269262-26269115 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 115
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 22, 0

Conread position: 120-334
Cow position: chr19:10930450-10930242 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 153
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 27, 45

Conread position: 120-334
Cow position: chr19:38732105-38732322 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 162
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 26, 0

Conread position: 120-344
Cow position: chr19:40002390-40002164 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 164
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 26, 74

Conread position: 121-345
Cow position: chr19:37467094-37466866 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 158
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 25, 124

Conread position: 123-341
Cow position: chr19:34654641-34654419 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 162
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 21, 60

Conread position: 132-334
Cow position: chr19:24692986-24693188 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 153
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 14, 113

Conread position: 135-311
Cow position: chr19:25832218-25832044 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 128
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 11, 110

Conread position: 143-316
Cow position: chr19:19916430-19916257 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 136
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 166, 126

Conread position: 144-353
Cow position: chr19:39981728-39981943 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 163
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 108, 65

Conread position: 150-304
Cow position: chr19:36978264-36978423 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 120
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 120, 80

Conread position: 155-334
Cow position: chr19:22871255-22871072 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 129
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 17, 0

Conread position: 157-349
Cow position: chr19:23559386-23559584 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 138
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 115, 0

Conread position: 161-348
Cow position: chr19:33233591-33233780 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 132
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 145, 0

Conread position: 170-349
Cow position: chr19:6854934-6855116 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 131
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 11, 0

Conread position: 172-301
Cow position: chr19:14823275-14823404 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 105
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 98, 72

Conread position: 172-348
Cow position: chr19:7864076-7864253 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 132
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 78, 97

Conread position: 172-349
Cow position: chr19:43896327-43896500 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 130
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 133, 52

Conread position: 175-334
Cow position: chr19:4602672-4602512 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 120
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 101, 75

Show alignments to all cow chromosomes.