Cow genome map
| Conread name: | Spl1-SPL01B040095 |
| Conread position: | 83-220 |
| Cow position: | chr26:18651676-18651541 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 109 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 62, 50 |
| Conread position: | 83-242 |
| Cow position: | chr26:21637082-21636920 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 17, 28 |
| Conread position: | 83-250 |
| Cow position: | chr26:6514800-6514968 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 83-265 |
| Cow position: | chr26:19110141-19110322 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 62, 168 |
| Conread position: | 83-265 |
| Cow position: | chr26:19774343-19774162 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 20, 39 |
| Conread position: | 83-273 |
| Cow position: | chr26:8700089-8699898 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 21, 28 |
| Conread position: | 83-273 |
| Cow position: | chr26:14175239-14175427 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 142 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 62, 168 |
| Conread position: | 83-273 |
| Cow position: | chr26:24240634-24240825 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 143 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 31, 96 |
| Conread position: | 83-273 |
| Cow position: | chr26:31605364-31605552 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 29, 44 |
| Conread position: | 83-274 |
| Cow position: | chr26:23582988-23582797 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 40, 26 |
| Conread position: | 83-277 |
| Cow position: | chr26:35704345-35704534 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 63, 139 |
| Conread position: | 83-324 |
| Cow position: | chr26:5836862-5836616 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 65, 24 |
| Conread position: | 83-326 |
| Cow position: | chr26:33736595-33736355 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 64, 39 |
| Conread position: | 83-333 |
| Cow position: | chr26:647768-647512 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 26, 79 |
| Conread position: | 83-333 |
| Cow position: | chr26:20291734-20291482 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 191 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 63, 27 |
| Conread position: | 83-333 |
| Cow position: | chr26:23924805-23925053 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 32, 195 |
| Conread position: | 83-334 |
| Cow position: | chr26:8307566-8307320 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 186 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 18, 31 |
| Conread position: | 83-334 |
| Cow position: | chr26:9491882-9492130 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 26, 99 |
| Conread position: | 83-334 |
| Cow position: | chr26:22892489-22892236 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 31, 163 |
| Conread position: | 83-334 |
| Cow position: | chr26:33202111-33201859 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 63, 36 |
| Conread position: | 83-341 |
| Cow position: | chr26:26888175-26887919 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 62, 22 |
| Conread position: | 83-347 |
| Cow position: | chr26:14481595-14481343 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 185 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 29, 37 |
| Conread position: | 83-347 |
| Cow position: | chr26:19591440-19591704 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 185 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 63, 162 |
| Conread position: | 83-351 |
| Cow position: | chr26:20769807-20770076 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 190 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 21, 163 |
| Conread position: | 83-352 |
| Cow position: | chr26:26950494-26950228 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 22, 43 |
| Conread position: | 86-264 |
| Cow position: | chr26:33392354-33392531 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 23, 47 |
| Conread position: | 86-300 |
| Cow position: | chr26:678020-677806 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 60, 159 |
| Conread position: | 86-333 |
| Cow position: | chr26:19636251-19636500 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 181 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 23, 157 |
| Conread position: | 86-334 |
| Cow position: | chr26:9535478-9535725 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 28, 21 |
| Conread position: | 86-346 |
| Cow position: | chr26:28423247-28423512 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 18, 35 |
| Conread position: | 87-282 |
| Cow position: | chr26:23315732-23315926 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 147 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 22, 43 |
| Conread position: | 87-290 |
| Cow position: | chr26:13021183-13020982 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 149 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 59, 30 |
| Conread position: | 87-324 |
| Cow position: | chr26:13802075-13802310 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 167 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 59, 20 |
| Conread position: | 87-338 |
| Cow position: | chr26:32897909-32897665 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 177 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 36, 132 |
| Conread position: | 89-334 |
| Cow position: | chr26:22033446-22033689 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 11, 141 |
| Conread position: | 90-346 |
| Cow position: | chr26:32565980-32566234 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 169 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 216, 10 |
| Conread position: | 92-347 |
| Cow position: | chr26:34560203-34559947 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 9, 53 |
| Conread position: | 93-324 |
| Cow position: | chr26:7314586-7314830 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 176 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 95-334 |
| Cow position: | chr26:18825318-18825072 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 41, 154 |
| Conread position: | 99-273 |
| Cow position: | chr26:34154106-34154280 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 25, 148 |
| Conread position: | 100-324 |
| Cow position: | chr26:19446108-19446339 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 173 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 45, 56 |
| Conread position: | 100-334 |
| Cow position: | chr26:34724896-34724663 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 168 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 45, 17 |
| Conread position: | 103-348 |
| Cow position: | chr26:34611204-34610961 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 21, 14 |
| Conread position: | 105-347 |
| Cow position: | chr26:12893450-12893205 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 9, 122 |
| Conread position: | 107-351 |
| Cow position: | chr26:1328875-1328637 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 175 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 38, 118 |
| Conread position: | 109-290 |
| Cow position: | chr26:33241874-33242054 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 36, 10 |
| Conread position: | 119-334 |
| Cow position: | chr26:11875228-11875013 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 27, 191 |
| Conread position: | 120-243 |
| Cow position: | chr26:17651954-17652078 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 95 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 120-263 |
| Cow position: | chr26:13292513-13292657 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 150-349 |
| Cow position: | chr26:6487766-6487565 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 120, 94 |
| Conread position: | 150-349 |
| Cow position: | chr26:33038198-33037997 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 156, 94 |
| Conread position: | 151-278 |
| Cow position: | chr26:28410009-28410138 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 102 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 161-382 |
| Cow position: | chr26:10700867-10700642 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 162 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 115, 129 |
| Conread position: | 175-316 |
| Cow position: | chr26:29897237-29897377 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 91, 69 |
Show alignments to all cow chromosomes.