Cow genome map

Conread name: Spl1-SPL01B040095

Conread position: 83-256
Cow position: chr28:4179500-4179670 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 126
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 63, 79

Conread position: 83-257
Cow position: chr28:5128785-5128608 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 132
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 40, 0

Conread position: 83-261
Cow position: chr28:10589077-10588900 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 132
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 32, 147

Conread position: 83-265
Cow position: chr28:27161381-27161201 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 134
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 21, 35

Conread position: 83-269
Cow position: chr28:2960887-2960697 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 139
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 20, 28

Conread position: 83-271
Cow position: chr28:12070181-12070363 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 148
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 22, 61

Conread position: 83-273
Cow position: chr28:2131980-2131790 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 146
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 27, 38

Conread position: 83-273
Cow position: chr28:6971404-6971210 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 137
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 20, 0

Conread position: 83-280
Cow position: chr28:25249300-25249493 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 138
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 9, 37

Conread position: 83-300
Cow position: chr28:9684386-9684173 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 150
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 63, 38

Conread position: 83-307
Cow position: chr28:7927121-7927340 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 152
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 14, 76

Conread position: 83-316
Cow position: chr28:22332481-22332712 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 170
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 176, 34

Conread position: 83-316
Cow position: chr28:22345965-22346204 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 168
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 32, 232

Conread position: 83-323
Cow position: chr28:33884347-33884591 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 165
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 21, 56

Conread position: 83-324
Cow position: chr28:3914658-3914895 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 176
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 21, 166

Conread position: 83-327
Cow position: chr28:7350604-7350843 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 176
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 65, 27

Conread position: 83-327
Cow position: chr28:24966331-24966579 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 165
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 40, 68

Conread position: 83-328
Cow position: chr28:25056913-25057150 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 176
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 62, 30

Conread position: 83-333
Cow position: chr28:4158901-4159163 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 183
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 62, 36

Conread position: 83-333
Cow position: chr28:5437141-5436887 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 173
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 31, 133

Conread position: 83-334
Cow position: chr28:3411045-3410789 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 180
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 25, 163

Conread position: 83-334
Cow position: chr28:4016479-4016723 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 183
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 63, 27

Conread position: 83-334
Cow position: chr28:11426595-11426348 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 181
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 17, 31

Conread position: 83-342
Cow position: chr28:4013033-4013291 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 195
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 62, 23

Conread position: 83-343
Cow position: chr28:13474247-13474508 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 191
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 63, 42

Conread position: 83-345
Cow position: chr28:4181950-4182211 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 195
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 62, 27

Conread position: 83-346
Cow position: chr28:11422869-11422607 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 185
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 14, 100

Conread position: 83-347
Cow position: chr28:24082209-24082483 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 198
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 18, 0

Conread position: 83-349
Cow position: chr28:4070916-4071173 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 193
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 63, 22

Conread position: 83-349
Cow position: chr28:4884317-4884036 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 192
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 30, 177

Conread position: 83-350
Cow position: chr28:2523887-2524156 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 185
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 21, 94

Conread position: 83-350
Cow position: chr28:21844902-21845166 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 193
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 31, 56

Conread position: 83-350
Cow position: chr28:25128830-25129100 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 192
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 21, 102

Conread position: 83-354
Cow position: chr28:8140429-8140705 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 183
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 62, 24

Conread position: 83-362
Cow position: chr28:8787486-8787764 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 48

Conread position: 83-366
Cow position: chr28:16370133-16369858 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 210
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 62, 29

Conread position: 84-249
Cow position: chr28:15043916-15043750 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 122
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 16, 103

Conread position: 86-246
Cow position: chr28:2872865-2873027 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 121
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 14, 153

Conread position: 86-261
Cow position: chr28:2762143-2762317 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 133
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 59, 154

Conread position: 86-263
Cow position: chr28:16246119-16245941 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 135
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 31, 100

Conread position: 86-266
Cow position: chr28:11752193-11752010 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 134
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 28, 36

Conread position: 86-307
Cow position: chr28:5684655-5684871 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 156
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 61, 26

Conread position: 86-324
Cow position: chr28:4090098-4089869 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 170
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 60, 19

Conread position: 86-326
Cow position: chr28:3445533-3445288 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 179
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 23, 47

Conread position: 86-327
Cow position: chr28:11346534-11346296 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 165
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 58, 14

Conread position: 86-328
Cow position: chr28:5139047-5138805 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 174
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 15, 146

Conread position: 86-334
Cow position: chr28:7619203-7618960 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 179
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 23, 38

Conread position: 86-342
Cow position: chr28:19564282-19564027 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 178
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 16, 162

Conread position: 86-349
Cow position: chr28:11585255-11584994 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 186
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 17, 160

Conread position: 87-304
Cow position: chr28:16346582-16346368 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 159
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 58, 103

Conread position: 87-316
Cow position: chr28:26531331-26531099 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 173
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 13, 44

Conread position: 87-334
Cow position: chr28:10863836-10863600 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 174
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 27, 71

Conread position: 87-351
Cow position: chr28:3740831-3741080 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 187
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 58, 29

Conread position: 87-351
Cow position: chr28:4834895-4834626 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 185
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 59, 128

Conread position: 87-351
Cow position: chr28:11079257-11079516 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 188
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 132, 51

Conread position: 89-261
Cow position: chr28:4438662-4438834 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 127
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 57, 160

Conread position: 89-328
Cow position: chr28:5204145-5204379 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 178
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 18, 157

Conread position: 89-334
Cow position: chr28:3492832-3492587 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 172
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 16, 29

Conread position: 89-345
Cow position: chr28:11884567-11884321 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 178
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 57, 21

Conread position: 91-352
Cow position: chr28:22813214-22813467 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 189
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 10, 86

Conread position: 92-328
Cow position: chr28:14998020-14998258 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 165
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 9, 30

Conread position: 93-241
Cow position: chr28:2862821-2862972 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 118
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 8, 0

Conread position: 94-247
Cow position: chr28:10964380-10964529 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 117
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 36, 19

Conread position: 97-345
Cow position: chr28:30937708-30937472 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 178
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 49, 69

Conread position: 99-248
Cow position: chr28:8022140-8021992 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 114
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 47, 11

Conread position: 99-273
Cow position: chr28:7498186-7498013 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 129
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 47, 146

Conread position: 99-290
Cow position: chr28:12619538-12619724 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 138
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 47, 19

Conread position: 101-330
Cow position: chr28:4045813-4046040 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 159
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 175, 16

Conread position: 101-350
Cow position: chr28:10615983-10615731 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 171
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 13, 22

Conread position: 104-316
Cow position: chr28:12430570-12430789 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 159
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 5, 82

Conread position: 105-334
Cow position: chr28:5254842-5255071 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 172
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 10, 15

Conread position: 106-334
Cow position: chr28:9705622-9705856 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 166
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 40, 17

Conread position: 106-334
Cow position: chr28:24646561-24646783 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 158
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 40, 59

Conread position: 107-348
Cow position: chr28:12991105-12991347 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 177
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 39, 141

Conread position: 110-334
Cow position: chr28:6975213-6975434 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 159
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 36, 138

Conread position: 112-304
Cow position: chr28:7132112-7131923 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 143
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 34, 14

Conread position: 119-315
Cow position: chr28:17739806-17740003 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 146
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 27, 48

Conread position: 120-333
Cow position: chr28:11016390-11016603 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 149
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 66, 101

Conread position: 120-351
Cow position: chr28:4809761-4809987 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 159
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 26, 140

Conread position: 121-351
Cow position: chr28:16919185-16918958 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 170
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 24, 70

Conread position: 122-304
Cow position: chr28:16879557-16879736 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 132
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 24, 129

Conread position: 123-334
Cow position: chr28:29850830-29850622 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 152
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 23, 117

Conread position: 127-295
Cow position: chr28:4364833-4364666 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 123
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 18, 55

Conread position: 129-348
Cow position: chr28:8396326-8396543 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 165
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 17, 116

Conread position: 129-352
Cow position: chr28:5805662-5805883 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 159
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 17, 47

Conread position: 130-335
Cow position: chr28:32358100-32358305 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 144
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 16, 26

Conread position: 145-324
Cow position: chr28:7557726-7557540 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 134
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 121, 105

Conread position: 145-334
Cow position: chr28:24996605-24996418 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 135
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 159, 94

Conread position: 145-349
Cow position: chr28:16362526-16362326 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 140
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 163, 78

Conread position: 145-352
Cow position: chr28:9109224-9109428 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 151
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 161, 91

Conread position: 153-328
Cow position: chr28:2777546-2777724 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 124
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 101, 0

Conread position: 161-349
Cow position: chr28:3678386-3678573 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 139
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 148, 106

Conread position: 166-350
Cow position: chr28:17943759-17943939 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 130
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 75, 0

Conread position: 175-353
Cow position: chr28:26960871-26960695 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 131
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 131, 70

Show alignments to all cow chromosomes.