Cow genome map

Conread name: Spl1-SPL01B040095

Conread position: 83-211
Cow position: chr29:31477177-31477046 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 106
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 29, 42

Conread position: 83-239
Cow position: chr29:23220562-23220406 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 118
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 27, 131

Conread position: 83-243
Cow position: chr29:18012494-18012657 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 120
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 37, 0

Conread position: 83-256
Cow position: chr29:26615782-26615605 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 131
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 62, 0

Conread position: 83-257
Cow position: chr29:17607355-17607527 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 126
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 31, 143

Conread position: 83-262
Cow position: chr29:5186557-5186375 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 133
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 37, 0

Conread position: 83-273
Cow position: chr29:20770283-20770471 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 137
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 30, 95

Conread position: 83-274
Cow position: chr29:4480232-4480045 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 136
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 62, 75

Conread position: 83-284
Cow position: chr29:38978469-38978671 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 158
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 24, 128

Conread position: 83-289
Cow position: chr29:28840093-28840301 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 157
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 19, 163

Conread position: 83-304
Cow position: chr29:31943804-31944030 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 158
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 18, 28

Conread position: 83-304
Cow position: chr29:32176619-32176830 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 155
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 34, 16

Conread position: 83-324
Cow position: chr29:22029018-22028777 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 168
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 32, 92

Conread position: 83-326
Cow position: chr29:35501712-35501479 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 171
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 63, 14

Conread position: 83-327
Cow position: chr29:34359041-34358792 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 185
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 18, 38

Conread position: 83-328
Cow position: chr29:41112935-41112702 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 176
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 63, 17

Conread position: 83-333
Cow position: chr29:21666027-21666279 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 175
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 62, 22

Conread position: 83-333
Cow position: chr29:40117510-40117758 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 178
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 17, 38

Conread position: 83-334
Cow position: chr29:9709635-9709887 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 180
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 17, 27

Conread position: 83-334
Cow position: chr29:36952360-36952118 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 176
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 17, 107

Conread position: 83-340
Cow position: chr29:30548713-30548973 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 179
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 31, 227

Conread position: 83-342
Cow position: chr29:19762210-19762465 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 189
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 63, 27

Conread position: 83-345
Cow position: chr29:25737478-25737215 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 188
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 17, 195

Conread position: 83-347
Cow position: chr29:36530805-36531070 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 199
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 63, 167

Conread position: 83-349
Cow position: chr29:29923636-29923366 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 197
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 30, 51

Conread position: 83-349
Cow position: chr29:34773794-34773540 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 184
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 62, 22

Conread position: 84-351
Cow position: chr29:25092051-25092316 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 196
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 36, 63

Conread position: 86-273
Cow position: chr29:8926522-8926334 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 139
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 34, 161

Conread position: 86-328
Cow position: chr29:17297077-17297326 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 178
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 22, 35

Conread position: 86-334
Cow position: chr29:22162310-22162070 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 178
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 17, 156

Conread position: 86-342
Cow position: chr29:26778821-26779078 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 174
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 23, 92

Conread position: 86-350
Cow position: chr29:21443398-21443132 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 188
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 18, 25

Conread position: 86-351
Cow position: chr29:32656374-32656645 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 185
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 27, 35

Conread position: 87-349
Cow position: chr29:22167138-22166877 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 181
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 16, 163

Conread position: 88-291
Cow position: chr29:1556876-1557079 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 151
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 57, 22

Conread position: 89-264
Cow position: chr29:4002834-4003010 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 139
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 11, 161

Conread position: 89-273
Cow position: chr29:23243934-23243751 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 135
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 25, 49

Conread position: 89-348
Cow position: chr29:22613372-22613630 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 185
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 26, 138

Conread position: 90-249
Cow position: chr29:23155174-23155331 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 119
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 56, 17

Conread position: 90-265
Cow position: chr29:4874941-4874761 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 134
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 13, 132

Conread position: 90-273
Cow position: chr29:18085516-18085701 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 128
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 34, 0

Conread position: 91-266
Cow position: chr29:36217063-36217234 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 130
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 31, 16

Conread position: 91-334
Cow position: chr29:19949253-19949499 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 177
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 31, 22

Conread position: 91-355
Cow position: chr29:732566-732822 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 186
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 32, 102

Conread position: 92-351
Cow position: chr29:16290673-16290934 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 173
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 11, 26

Conread position: 99-316
Cow position: chr29:23825258-23825036 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 159
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 15, 0

Conread position: 99-334
Cow position: chr29:7624134-7624359 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 168
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 49, 11

Conread position: 99-347
Cow position: chr29:44991469-44991219 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 168
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 47, 67

Conread position: 100-346
Cow position: chr29:4070582-4070825 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 171
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 12, 69

Conread position: 112-338
Cow position: chr29:32197664-32197894 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 169
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 33, 139

Conread position: 113-249
Cow position: chr29:742681-742544 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 108
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 31, 0

Conread position: 119-335
Cow position: chr29:22723575-22723790 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 164
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 27, 129

Conread position: 120-334
Cow position: chr29:17109935-17110147 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 156
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 26, 62

Conread position: 120-335
Cow position: chr29:26540565-26540345 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 155
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 26, 126

Conread position: 120-350
Cow position: chr29:17804510-17804742 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 167
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 27, 82

Conread position: 125-347
Cow position: chr29:39038289-39038062 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 163
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 20, 0

Conread position: 130-342
Cow position: chr29:9310585-9310805 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 151
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 16, 52

Conread position: 130-382
Cow position: chr29:9378622-9378881 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 175
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 16, 115

Conread position: 132-334
Cow position: chr29:36781317-36781116 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 147
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 13, 113

Conread position: 134-335
Cow position: chr29:19363700-19363903 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 152
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 10, 52

Conread position: 135-349
Cow position: chr29:22729558-22729774 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 149
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 11, 39

Conread position: 144-333
Cow position: chr29:40351075-40350888 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 134
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 165, 31

Conread position: 145-334
Cow position: chr29:15797953-15798145 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 136
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 110, 159

Conread position: 145-341
Cow position: chr29:15796487-15796685 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 138
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 110, 40

Conread position: 165-347
Cow position: chr29:17282089-17282267 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 138
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 143, 58

Conread position: 167-347
Cow position: chr29:24660710-24660884 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 135
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 139, 11

Conread position: 173-353
Cow position: chr29:33143325-33143147 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 134
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 98, 79

Conread position: 175-322
Cow position: chr29:41223196-41223346 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 112
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 79, 41

Conread position: 187-334
Cow position: chr29:40112425-40112573 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 85, 63

Show alignments to all cow chromosomes.