Cow genome map
Conread name: | Spl1-SPL01B040095 |
Conread position: | 83-211 |
Cow position: | chr29:31477177-31477046 (view UCSC Genome Browser custom track) |
Alignm length: | 133 |
Alignm identity: | 106 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 29, 42 |
Conread position: | 83-239 |
Cow position: | chr29:23220562-23220406 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 118 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 27, 131 |
Conread position: | 83-243 |
Cow position: | chr29:18012494-18012657 (view UCSC Genome Browser custom track) |
Alignm length: | 164 |
Alignm identity: | 120 |
Alignm E-value: | 5e-24 |
Alignm gaps (pig, cow): | 37, 0 |
Conread position: | 83-256 |
Cow position: | chr29:26615782-26615605 (view UCSC Genome Browser custom track) |
Alignm length: | 178 |
Alignm identity: | 131 |
Alignm E-value: | 7e-28 |
Alignm gaps (pig, cow): | 62, 0 |
Conread position: | 83-257 |
Cow position: | chr29:17607355-17607527 (view UCSC Genome Browser custom track) |
Alignm length: | 177 |
Alignm identity: | 126 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 31, 143 |
Conread position: | 83-262 |
Cow position: | chr29:5186557-5186375 (view UCSC Genome Browser custom track) |
Alignm length: | 183 |
Alignm identity: | 133 |
Alignm E-value: | 7e-28 |
Alignm gaps (pig, cow): | 37, 0 |
Conread position: | 83-273 |
Cow position: | chr29:20770283-20770471 (view UCSC Genome Browser custom track) |
Alignm length: | 194 |
Alignm identity: | 137 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 30, 95 |
Conread position: | 83-274 |
Cow position: | chr29:4480232-4480045 (view UCSC Genome Browser custom track) |
Alignm length: | 193 |
Alignm identity: | 136 |
Alignm E-value: | 5e-24 |
Alignm gaps (pig, cow): | 62, 75 |
Conread position: | 83-284 |
Cow position: | chr29:38978469-38978671 (view UCSC Genome Browser custom track) |
Alignm length: | 205 |
Alignm identity: | 158 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 24, 128 |
Conread position: | 83-289 |
Cow position: | chr29:28840093-28840301 (view UCSC Genome Browser custom track) |
Alignm length: | 211 |
Alignm identity: | 157 |
Alignm E-value: | 5e-35 |
Alignm gaps (pig, cow): | 19, 163 |
Conread position: | 83-304 |
Cow position: | chr29:31943804-31944030 (view UCSC Genome Browser custom track) |
Alignm length: | 229 |
Alignm identity: | 158 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 18, 28 |
Conread position: | 83-304 |
Cow position: | chr29:32176619-32176830 (view UCSC Genome Browser custom track) |
Alignm length: | 224 |
Alignm identity: | 155 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 34, 16 |
Conread position: | 83-324 |
Cow position: | chr29:22029018-22028777 (view UCSC Genome Browser custom track) |
Alignm length: | 249 |
Alignm identity: | 168 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 32, 92 |
Conread position: | 83-326 |
Cow position: | chr29:35501712-35501479 (view UCSC Genome Browser custom track) |
Alignm length: | 247 |
Alignm identity: | 171 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 63, 14 |
Conread position: | 83-327 |
Cow position: | chr29:34359041-34358792 (view UCSC Genome Browser custom track) |
Alignm length: | 254 |
Alignm identity: | 185 |
Alignm E-value: | 5e-35 |
Alignm gaps (pig, cow): | 18, 38 |
Conread position: | 83-328 |
Cow position: | chr29:41112935-41112702 (view UCSC Genome Browser custom track) |
Alignm length: | 249 |
Alignm identity: | 176 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 63, 17 |
Conread position: | 83-333 |
Cow position: | chr29:21666027-21666279 (view UCSC Genome Browser custom track) |
Alignm length: | 255 |
Alignm identity: | 175 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 62, 22 |
Conread position: | 83-333 |
Cow position: | chr29:40117510-40117758 (view UCSC Genome Browser custom track) |
Alignm length: | 256 |
Alignm identity: | 178 |
Alignm E-value: | 8e-29 |
Alignm gaps (pig, cow): | 17, 38 |
Conread position: | 83-334 |
Cow position: | chr29:9709635-9709887 (view UCSC Genome Browser custom track) |
Alignm length: | 258 |
Alignm identity: | 180 |
Alignm E-value: | 9e-30 |
Alignm gaps (pig, cow): | 17, 27 |
Conread position: | 83-334 |
Cow position: | chr29:36952360-36952118 (view UCSC Genome Browser custom track) |
Alignm length: | 257 |
Alignm identity: | 176 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 17, 107 |
Conread position: | 83-340 |
Cow position: | chr29:30548713-30548973 (view UCSC Genome Browser custom track) |
Alignm length: | 262 |
Alignm identity: | 179 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 31, 227 |
Conread position: | 83-342 |
Cow position: | chr29:19762210-19762465 (view UCSC Genome Browser custom track) |
Alignm length: | 263 |
Alignm identity: | 189 |
Alignm E-value: | 6e-37 |
Alignm gaps (pig, cow): | 63, 27 |
Conread position: | 83-345 |
Cow position: | chr29:25737478-25737215 (view UCSC Genome Browser custom track) |
Alignm length: | 267 |
Alignm identity: | 188 |
Alignm E-value: | 5e-36 |
Alignm gaps (pig, cow): | 17, 195 |
Conread position: | 83-347 |
Cow position: | chr29:36530805-36531070 (view UCSC Genome Browser custom track) |
Alignm length: | 270 |
Alignm identity: | 199 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 63, 167 |
Conread position: | 83-349 |
Cow position: | chr29:29923636-29923366 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 197 |
Alignm E-value: | 9.99967e-42 |
Alignm gaps (pig, cow): | 30, 51 |
Conread position: | 83-349 |
Cow position: | chr29:34773794-34773540 (view UCSC Genome Browser custom track) |
Alignm length: | 269 |
Alignm identity: | 184 |
Alignm E-value: | 6e-26 |
Alignm gaps (pig, cow): | 62, 22 |
Conread position: | 84-351 |
Cow position: | chr29:25092051-25092316 (view UCSC Genome Browser custom track) |
Alignm length: | 275 |
Alignm identity: | 196 |
Alignm E-value: | 5e-35 |
Alignm gaps (pig, cow): | 36, 63 |
Conread position: | 86-273 |
Cow position: | chr29:8926522-8926334 (view UCSC Genome Browser custom track) |
Alignm length: | 191 |
Alignm identity: | 139 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 34, 161 |
Conread position: | 86-328 |
Cow position: | chr29:17297077-17297326 (view UCSC Genome Browser custom track) |
Alignm length: | 255 |
Alignm identity: | 178 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 22, 35 |
Conread position: | 86-334 |
Cow position: | chr29:22162310-22162070 (view UCSC Genome Browser custom track) |
Alignm length: | 252 |
Alignm identity: | 178 |
Alignm E-value: | 9e-30 |
Alignm gaps (pig, cow): | 17, 156 |
Conread position: | 86-342 |
Cow position: | chr29:26778821-26779078 (view UCSC Genome Browser custom track) |
Alignm length: | 263 |
Alignm identity: | 174 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 23, 92 |
Conread position: | 86-350 |
Cow position: | chr29:21443398-21443132 (view UCSC Genome Browser custom track) |
Alignm length: | 274 |
Alignm identity: | 188 |
Alignm E-value: | 6e-26 |
Alignm gaps (pig, cow): | 18, 25 |
Conread position: | 86-351 |
Cow position: | chr29:32656374-32656645 (view UCSC Genome Browser custom track) |
Alignm length: | 277 |
Alignm identity: | 185 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 27, 35 |
Conread position: | 87-349 |
Cow position: | chr29:22167138-22166877 (view UCSC Genome Browser custom track) |
Alignm length: | 269 |
Alignm identity: | 181 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 16, 163 |
Conread position: | 88-291 |
Cow position: | chr29:1556876-1557079 (view UCSC Genome Browser custom track) |
Alignm length: | 208 |
Alignm identity: | 151 |
Alignm E-value: | 8e-29 |
Alignm gaps (pig, cow): | 57, 22 |
Conread position: | 89-264 |
Cow position: | chr29:4002834-4003010 (view UCSC Genome Browser custom track) |
Alignm length: | 179 |
Alignm identity: | 139 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 11, 161 |
Conread position: | 89-273 |
Cow position: | chr29:23243934-23243751 (view UCSC Genome Browser custom track) |
Alignm length: | 187 |
Alignm identity: | 135 |
Alignm E-value: | 6e-26 |
Alignm gaps (pig, cow): | 25, 49 |
Conread position: | 89-348 |
Cow position: | chr29:22613372-22613630 (view UCSC Genome Browser custom track) |
Alignm length: | 264 |
Alignm identity: | 185 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 26, 138 |
Conread position: | 90-249 |
Cow position: | chr29:23155174-23155331 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 119 |
Alignm E-value: | 5e-24 |
Alignm gaps (pig, cow): | 56, 17 |
Conread position: | 90-265 |
Cow position: | chr29:4874941-4874761 (view UCSC Genome Browser custom track) |
Alignm length: | 184 |
Alignm identity: | 134 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 13, 132 |
Conread position: | 90-273 |
Cow position: | chr29:18085516-18085701 (view UCSC Genome Browser custom track) |
Alignm length: | 186 |
Alignm identity: | 128 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 34, 0 |
Conread position: | 91-266 |
Cow position: | chr29:36217063-36217234 (view UCSC Genome Browser custom track) |
Alignm length: | 178 |
Alignm identity: | 130 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 31, 16 |
Conread position: | 91-334 |
Cow position: | chr29:19949253-19949499 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 177 |
Alignm E-value: | 7e-28 |
Alignm gaps (pig, cow): | 31, 22 |
Conread position: | 91-355 |
Cow position: | chr29:732566-732822 (view UCSC Genome Browser custom track) |
Alignm length: | 270 |
Alignm identity: | 186 |
Alignm E-value: | 5e-25 |
Alignm gaps (pig, cow): | 32, 102 |
Conread position: | 92-351 |
Cow position: | chr29:16290673-16290934 (view UCSC Genome Browser custom track) |
Alignm length: | 265 |
Alignm identity: | 173 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 11, 26 |
Conread position: | 99-316 |
Cow position: | chr29:23825258-23825036 (view UCSC Genome Browser custom track) |
Alignm length: | 223 |
Alignm identity: | 159 |
Alignm E-value: | 4e-32 |
Alignm gaps (pig, cow): | 15, 0 |
Conread position: | 99-334 |
Cow position: | chr29:7624134-7624359 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 168 |
Alignm E-value: | 3e-29 |
Alignm gaps (pig, cow): | 49, 11 |
Conread position: | 99-347 |
Cow position: | chr29:44991469-44991219 (view UCSC Genome Browser custom track) |
Alignm length: | 255 |
Alignm identity: | 168 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 47, 67 |
Conread position: | 100-346 |
Cow position: | chr29:4070582-4070825 (view UCSC Genome Browser custom track) |
Alignm length: | 251 |
Alignm identity: | 171 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 12, 69 |
Conread position: | 112-338 |
Cow position: | chr29:32197664-32197894 (view UCSC Genome Browser custom track) |
Alignm length: | 234 |
Alignm identity: | 169 |
Alignm E-value: | 4e-33 |
Alignm gaps (pig, cow): | 33, 139 |
Conread position: | 113-249 |
Cow position: | chr29:742681-742544 (view UCSC Genome Browser custom track) |
Alignm length: | 138 |
Alignm identity: | 108 |
Alignm E-value: | 6e-27 |
Alignm gaps (pig, cow): | 31, 0 |
Conread position: | 119-335 |
Cow position: | chr29:22723575-22723790 (view UCSC Genome Browser custom track) |
Alignm length: | 220 |
Alignm identity: | 164 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 27, 129 |
Conread position: | 120-334 |
Cow position: | chr29:17109935-17110147 (view UCSC Genome Browser custom track) |
Alignm length: | 219 |
Alignm identity: | 156 |
Alignm E-value: | 6e-27 |
Alignm gaps (pig, cow): | 26, 62 |
Conread position: | 120-335 |
Cow position: | chr29:26540565-26540345 (view UCSC Genome Browser custom track) |
Alignm length: | 222 |
Alignm identity: | 155 |
Alignm E-value: | 6e-27 |
Alignm gaps (pig, cow): | 26, 126 |
Conread position: | 120-350 |
Cow position: | chr29:17804510-17804742 (view UCSC Genome Browser custom track) |
Alignm length: | 236 |
Alignm identity: | 167 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 27, 82 |
Conread position: | 125-347 |
Cow position: | chr29:39038289-39038062 (view UCSC Genome Browser custom track) |
Alignm length: | 228 |
Alignm identity: | 163 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 20, 0 |
Conread position: | 130-342 |
Cow position: | chr29:9310585-9310805 (view UCSC Genome Browser custom track) |
Alignm length: | 222 |
Alignm identity: | 151 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 16, 52 |
Conread position: | 130-382 |
Cow position: | chr29:9378622-9378881 (view UCSC Genome Browser custom track) |
Alignm length: | 263 |
Alignm identity: | 175 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 16, 115 |
Conread position: | 132-334 |
Cow position: | chr29:36781317-36781116 (view UCSC Genome Browser custom track) |
Alignm length: | 206 |
Alignm identity: | 147 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 13, 113 |
Conread position: | 134-335 |
Cow position: | chr29:19363700-19363903 (view UCSC Genome Browser custom track) |
Alignm length: | 207 |
Alignm identity: | 152 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 10, 52 |
Conread position: | 135-349 |
Cow position: | chr29:22729558-22729774 (view UCSC Genome Browser custom track) |
Alignm length: | 220 |
Alignm identity: | 149 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 11, 39 |
Conread position: | 144-333 |
Cow position: | chr29:40351075-40350888 (view UCSC Genome Browser custom track) |
Alignm length: | 192 |
Alignm identity: | 134 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 165, 31 |
Conread position: | 145-334 |
Cow position: | chr29:15797953-15798145 (view UCSC Genome Browser custom track) |
Alignm length: | 194 |
Alignm identity: | 136 |
Alignm E-value: | 5e-24 |
Alignm gaps (pig, cow): | 110, 159 |
Conread position: | 145-341 |
Cow position: | chr29:15796487-15796685 (view UCSC Genome Browser custom track) |
Alignm length: | 201 |
Alignm identity: | 138 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 110, 40 |
Conread position: | 165-347 |
Cow position: | chr29:17282089-17282267 (view UCSC Genome Browser custom track) |
Alignm length: | 184 |
Alignm identity: | 138 |
Alignm E-value: | 3e-29 |
Alignm gaps (pig, cow): | 143, 58 |
Conread position: | 167-347 |
Cow position: | chr29:24660710-24660884 (view UCSC Genome Browser custom track) |
Alignm length: | 183 |
Alignm identity: | 135 |
Alignm E-value: | 5e-24 |
Alignm gaps (pig, cow): | 139, 11 |
Conread position: | 173-353 |
Cow position: | chr29:33143325-33143147 (view UCSC Genome Browser custom track) |
Alignm length: | 185 |
Alignm identity: | 134 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 98, 79 |
Conread position: | 175-322 |
Cow position: | chr29:41223196-41223346 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 112 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 79, 41 |
Conread position: | 187-334 |
Cow position: | chr29:40112425-40112573 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 113 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 85, 63 |
Show alignments to all cow chromosomes.