Cow genome map
| Conread name: | Spl1-SPL01B040095 |
| Conread position: | 76-351 |
| Cow position: | chr5:26549182-26548902 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 201 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 25, 186 |
| Conread position: | 79-355 |
| Cow position: | chr5:8736327-8736031 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 207 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 46, 126 |
| Conread position: | 83-243 |
| Cow position: | chr5:24136680-24136841 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 18, 130 |
| Conread position: | 83-243 |
| Cow position: | chr5:26150454-26150294 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 116 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 63, 93 |
| Conread position: | 83-243 |
| Cow position: | chr5:56517069-56517231 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 26, 33 |
| Conread position: | 83-249 |
| Cow position: | chr5:6045258-6045429 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 123 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 83-254 |
| Cow position: | chr5:33537835-33538012 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 128 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 63, 22 |
| Conread position: | 83-264 |
| Cow position: | chr5:44028338-44028163 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 137 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 26, 94 |
| Conread position: | 83-264 |
| Cow position: | chr5:54375540-54375356 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 40, 30 |
| Conread position: | 83-265 |
| Cow position: | chr5:55966912-55966736 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 63, 23 |
| Conread position: | 83-265 |
| Cow position: | chr5:63150201-63150021 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 63, 27 |
| Conread position: | 83-269 |
| Cow position: | chr5:66551932-66551745 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 18, 167 |
| Conread position: | 83-269 |
| Cow position: | chr5:67118385-67118571 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 131 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 40, 163 |
| Conread position: | 83-271 |
| Cow position: | chr5:5111108-5110916 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 136 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 63, 167 |
| Conread position: | 83-273 |
| Cow position: | chr5:56339053-56338866 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 21, 35 |
| Conread position: | 83-274 |
| Cow position: | chr5:17602234-17602049 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 40, 27 |
| Conread position: | 83-275 |
| Cow position: | chr5:30949950-30949758 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 134 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 19, 163 |
| Conread position: | 83-286 |
| Cow position: | chr5:66530884-66531087 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 139 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 26, 128 |
| Conread position: | 83-287 |
| Cow position: | chr5:37646579-37646375 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 143 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 17, 130 |
| Conread position: | 83-290 |
| Cow position: | chr5:35982774-35982562 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 83-290 |
| Cow position: | chr5:61102681-61102890 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 63, 72 |
| Conread position: | 83-290 |
| Cow position: | chr5:63987482-63987273 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 19, 88 |
| Conread position: | 83-298 |
| Cow position: | chr5:60183768-60183984 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 24, 171 |
| Conread position: | 83-304 |
| Cow position: | chr5:65752824-65753050 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 32, 159 |
| Conread position: | 83-320 |
| Cow position: | chr5:66466285-66466521 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 40, 27 |
| Conread position: | 83-324 |
| Cow position: | chr5:16893806-16893566 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 163 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 22, 162 |
| Conread position: | 83-324 |
| Cow position: | chr5:45397539-45397777 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 63, 97 |
| Conread position: | 83-333 |
| Cow position: | chr5:22667044-22667291 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 187 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 26, 55 |
| Conread position: | 83-333 |
| Cow position: | chr5:24996256-24996000 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 19, 37 |
| Conread position: | 83-333 |
| Cow position: | chr5:30629192-30628932 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 64, 27 |
| Conread position: | 83-334 |
| Cow position: | chr5:7044740-7044484 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 40, 186 |
| Conread position: | 83-334 |
| Cow position: | chr5:30276664-30276909 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 186 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 63, 24 |
| Conread position: | 83-334 |
| Cow position: | chr5:34624924-34625170 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 19, 36 |
| Conread position: | 83-334 |
| Cow position: | chr5:40109458-40109706 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 188 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 20, 110 |
| Conread position: | 83-334 |
| Cow position: | chr5:43402867-43403131 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 189 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 21, 158 |
| Conread position: | 83-334 |
| Cow position: | chr5:44446901-44446653 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 184 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 38, 29 |
| Conread position: | 83-334 |
| Cow position: | chr5:57074367-57074115 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 180 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 32, 170 |
| Conread position: | 83-334 |
| Cow position: | chr5:62172381-62172620 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 63, 30 |
| Conread position: | 83-334 |
| Cow position: | chr5:69337790-69338036 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 63, 22 |
| Conread position: | 83-335 |
| Cow position: | chr5:74643704-74643461 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 223, 23 |
| Conread position: | 83-336 |
| Cow position: | chr5:72006526-72006272 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 31, 174 |
| Conread position: | 83-342 |
| Cow position: | chr5:50943180-50942932 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 153, 26 |
| Conread position: | 83-342 |
| Cow position: | chr5:72895652-72895916 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 171 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 83-345 |
| Cow position: | chr5:3582532-3582788 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 182 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 63, 17 |
| Conread position: | 83-345 |
| Cow position: | chr5:59627007-59626740 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 150 |
| Conread position: | 83-346 |
| Cow position: | chr5:4280415-4280677 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 179 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 63, 25 |
| Conread position: | 83-346 |
| Cow position: | chr5:66257605-66257866 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 187 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 63, 99 |
| Conread position: | 83-348 |
| Cow position: | chr5:26467590-26467862 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 181 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 18, 239 |
| Conread position: | 83-349 |
| Cow position: | chr5:36039039-36038768 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 193 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 21, 97 |
| Conread position: | 83-349 |
| Cow position: | chr5:56014696-56014961 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 188 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 39, 163 |
| Conread position: | 83-349 |
| Cow position: | chr5:57935142-57934883 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 62, 162 |
| Conread position: | 83-350 |
| Cow position: | chr5:56070823-56071095 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 170 |
| Conread position: | 83-351 |
| Cow position: | chr5:19752271-19752540 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 179 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 14, 87 |
| Conread position: | 83-351 |
| Cow position: | chr5:30845078-30845345 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 177 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 38, 100 |
| Conread position: | 86-252 |
| Cow position: | chr5:45804029-45804196 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 124 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 45, 21 |
| Conread position: | 86-254 |
| Cow position: | chr5:15598268-15598100 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 17, 123 |
| Conread position: | 86-273 |
| Cow position: | chr5:19523870-19524055 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 25, 34 |
| Conread position: | 86-273 |
| Cow position: | chr5:32338996-32338811 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 130 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 82, 154 |
| Conread position: | 86-273 |
| Cow position: | chr5:35684906-35685092 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 36, 97 |
| Conread position: | 86-273 |
| Cow position: | chr5:46509897-46509709 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 26, 163 |
| Conread position: | 86-331 |
| Cow position: | chr5:17555064-17554816 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 185 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 17, 147 |
| Conread position: | 86-334 |
| Cow position: | chr5:30302863-30303103 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 182 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 26, 44 |
| Conread position: | 86-344 |
| Cow position: | chr5:17087053-17086786 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 192 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 23, 111 |
| Conread position: | 86-345 |
| Cow position: | chr5:21617427-21617687 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 193 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 59, 94 |
| Conread position: | 87-249 |
| Cow position: | chr5:50821753-50821916 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 87-304 |
| Cow position: | chr5:61725937-61726147 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 148 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 59, 78 |
| Conread position: | 87-334 |
| Cow position: | chr5:30253712-30253962 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 182 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 54, 23 |
| Conread position: | 87-349 |
| Cow position: | chr5:30232876-30233150 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 188 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 28, 137 |
| Conread position: | 88-273 |
| Cow position: | chr5:35969507-35969687 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 58, 29 |
| Conread position: | 88-334 |
| Cow position: | chr5:38833093-38833336 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 26, 60 |
| Conread position: | 88-348 |
| Cow position: | chr5:12322835-12322574 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 24, 90 |
| Conread position: | 89-334 |
| Cow position: | chr5:69099691-69099941 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 187 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 24, 163 |
| Conread position: | 90-342 |
| Cow position: | chr5:34561987-34562239 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 179 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 31, 164 |
| Conread position: | 90-345 |
| Cow position: | chr5:14920958-14920693 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 24, 49 |
| Conread position: | 93-304 |
| Cow position: | chr5:35826577-35826787 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 24, 157 |
| Conread position: | 97-334 |
| Cow position: | chr5:64176146-64175908 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 49, 157 |
| Conread position: | 102-350 |
| Cow position: | chr5:44796745-44796498 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 42, 9 |
| Conread position: | 103-324 |
| Cow position: | chr5:51298727-51298503 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 24, 81 |
| Conread position: | 103-334 |
| Cow position: | chr5:17104839-17105067 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 43, 79 |
| Conread position: | 105-324 |
| Cow position: | chr5:50600036-50600258 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 171 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 39, 25 |
| Conread position: | 105-346 |
| Cow position: | chr5:12673485-12673248 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 26, 14 |
| Conread position: | 105-349 |
| Cow position: | chr5:31052368-31052624 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 40, 158 |
| Conread position: | 106-338 |
| Cow position: | chr5:60523722-60523953 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 35, 78 |
| Conread position: | 109-328 |
| Cow position: | chr5:16939600-16939375 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 35, 10 |
| Conread position: | 111-263 |
| Cow position: | chr5:45126647-45126797 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 35, 8 |
| Conread position: | 113-274 |
| Cow position: | chr5:9233993-9233832 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 32, 133 |
| Conread position: | 115-316 |
| Cow position: | chr5:38168892-38169094 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 30, 126 |
| Conread position: | 120-257 |
| Cow position: | chr5:64139563-64139701 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 120-311 |
| Cow position: | chr5:34915050-34914858 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 120-335 |
| Cow position: | chr5:46541052-46540837 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 28, 59 |
| Conread position: | 120-352 |
| Cow position: | chr5:69383258-69383492 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 174 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 26, 124 |
| Conread position: | 121-334 |
| Cow position: | chr5:47601816-47602030 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 149 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 25, 119 |
| Conread position: | 121-352 |
| Cow position: | chr5:50824596-50824821 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 173 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 25, 124 |
| Conread position: | 122-249 |
| Cow position: | chr5:64027014-64026886 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 123-243 |
| Cow position: | chr5:12169762-12169642 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 98 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 22, 29 |
| Conread position: | 129-302 |
| Cow position: | chr5:46704287-46704112 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 16, 106 |
| Conread position: | 129-327 |
| Cow position: | chr5:55942367-55942162 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 146 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 130-304 |
| Cow position: | chr5:12351794-12351623 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 15, 95 |
| Conread position: | 130-334 |
| Cow position: | chr5:2240976-2240767 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 150 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 15, 35 |
| Conread position: | 130-342 |
| Cow position: | chr5:4267683-4267890 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 16, 118 |
| Conread position: | 130-342 |
| Cow position: | chr5:51247118-51246907 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 144 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 16, 178 |
| Conread position: | 132-349 |
| Cow position: | chr5:26147606-26147825 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 14, 185 |
| Conread position: | 144-334 |
| Cow position: | chr5:35190138-35190328 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 162, 100 |
| Conread position: | 145-316 |
| Cow position: | chr5:54312630-54312805 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 126 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 145-334 |
| Cow position: | chr5:34288221-34288032 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 119, 36 |
| Conread position: | 145-334 |
| Cow position: | chr5:37842250-37842057 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 135 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 125, 105 |
| Conread position: | 167-342 |
| Cow position: | chr5:34787625-34787801 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 97, 77 |
| Conread position: | 172-328 |
| Cow position: | chr5:21721414-21721259 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 101, 80 |
| Conread position: | 172-351 |
| Cow position: | chr5:49207271-49207089 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 131 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 91, 72 |
| Conread position: | 176-342 |
| Cow position: | chr5:66287005-66287171 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 124 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 130, 74 |
| Conread position: | 176-349 |
| Cow position: | chr5:29599486-29599316 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 130, 68 |
Show alignments to all cow chromosomes.