Cow genome map

Conread name: Spl1-SPL01C050096

Conread position: 1-247
Cow position:
Alignm length: 249
Alignm identity: 181
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 213, 89

Conread position: 1-249
Cow position:
Alignm length: 250
Alignm identity: 178
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 211, 183

Conread position: 1-255
Cow position:
Alignm length: 259
Alignm identity: 183
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 78, 122

Conread position: 1-265
Cow position:
Alignm length: 277
Alignm identity: 206
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 57, 93

Conread position: 1-270
Cow position:
Alignm length: 271
Alignm identity: 191
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 244, 123

Conread position: 1-298
Cow position:
Alignm length: 309
Alignm identity: 211
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 101, 22

Conread position: 1-321
Cow position:
Alignm length: 324
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 312

Conread position: 1-323
Cow position:
Alignm length: 328
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 29

Conread position: 1-324
Cow position:
Alignm length: 327
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 86

Conread position: 1-324
Cow position:
Alignm length: 326
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 0

Conread position: 1-325
Cow position:
Alignm length: 330
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 183

Conread position: 1-326
Cow position:
Alignm length: 338
Alignm identity: 232
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 71, 24

Conread position: 1-326
Cow position:
Alignm length: 331
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 183

Conread position: 1-331
Cow position:
Alignm length: 335
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 183

Conread position: 1-331
Cow position:
Alignm length: 334
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 186

Conread position: 1-338
Cow position:
Alignm length: 340
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 40

Conread position: 1-339
Cow position:
Alignm length: 344
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 20

Conread position: 1-339
Cow position:
Alignm length: 341
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 183

Conread position: 1-340
Cow position:
Alignm length: 346
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 24

Conread position: 1-351
Cow position:
Alignm length: 356
Alignm identity: 236
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 87, 34

Conread position: 1-351
Cow position:
Alignm length: 361
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 70

Conread position: 1-354
Cow position:
Alignm length: 357
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 68

Conread position: 1-365
Cow position:
Alignm length: 366
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 183

Conread position: 1-371
Cow position:
Alignm length: 393
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 187

Conread position: 1-372
Cow position:
Alignm length: 388
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 17

Conread position: 1-372
Cow position:
Alignm length: 385
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 183

Conread position: 1-375
Cow position:
Alignm length: 389
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 185

Conread position: 1-375
Cow position:
Alignm length: 391
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 21

Conread position: 1-375
Cow position:
Alignm length: 380
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 99

Conread position: 1-375
Cow position:
Alignm length: 394
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 142

Conread position: 1-375
Cow position:
Alignm length: 385
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 0

Conread position: 1-377
Cow position:
Alignm length: 397
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 52

Conread position: 1-378
Cow position:
Alignm length: 398
Alignm identity: 275
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 109, 69

Conread position: 1-379
Cow position:
Alignm length: 390
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 185

Conread position: 1-383
Cow position:
Alignm length: 399
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 19

Conread position: 1-383
Cow position:
Alignm length: 407
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 183

Conread position: 1-383
Cow position:
Alignm length: 396
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 183

Conread position: 1-383
Cow position:
Alignm length: 398
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 183

Conread position: 1-383
Cow position:
Alignm length: 385
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 112

Conread position: 1-383
Cow position:
Alignm length: 384
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 245

Conread position: 1-383
Cow position:
Alignm length: 398
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 137

Conread position: 1-383
Cow position:
Alignm length: 394
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 183

Conread position: 1-383
Cow position:
Alignm length: 403
Alignm identity: 273
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 98, 66

Conread position: 1-383
Cow position:
Alignm length: 398
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 71

Conread position: 1-383
Cow position:
Alignm length: 398
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 183

Conread position: 1-383
Cow position:
Alignm length: 391
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 185

Conread position: 1-383
Cow position:
Alignm length: 386
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 183

Conread position: 1-383
Cow position:
Alignm length: 402
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 183

Conread position: 1-383
Cow position:
Alignm length: 410
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 196

Conread position: 1-383
Cow position:
Alignm length: 394
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 183

Conread position: 1-383
Cow position:
Alignm length: 401
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 33

Conread position: 1-383
Cow position:
Alignm length: 397
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 322

Conread position: 1-383
Cow position:
Alignm length: 407
Alignm identity: 281
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 184, 204

Conread position: 1-383
Cow position:
Alignm length: 407
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 184

Conread position: 1-383
Cow position:
Alignm length: 403
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 24

Conread position: 1-383
Cow position:
Alignm length: 408
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 187

Conread position: 1-383
Cow position:
Alignm length: 398
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 183

Conread position: 1-383
Cow position:
Alignm length: 402
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 57

Conread position: 1-383
Cow position:
Alignm length: 408
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 183

Conread position: 1-383
Cow position:
Alignm length: 397
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 183

Conread position: 1-383
Cow position:
Alignm length: 395
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 98

Conread position: 1-383
Cow position:
Alignm length: 398
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 183

Conread position: 1-383
Cow position:
Alignm length: 402
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 31

Conread position: 1-383
Cow position:
Alignm length: 413
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 198

Conread position: 1-383
Cow position:
Alignm length: 396
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 93

Conread position: 1-383
Cow position:
Alignm length: 404
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 188

Conread position: 1-383
Cow position:
Alignm length: 398
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 182

Conread position: 1-383
Cow position:
Alignm length: 402
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 183

Conread position: 1-383
Cow position:
Alignm length: 400
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 16

Conread position: 1-383
Cow position:
Alignm length: 394
Alignm identity: 267
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 30, 46

Conread position: 1-383
Cow position:
Alignm length: 406
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 92

Conread position: 1-383
Cow position:
Alignm length: 398
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 43

Conread position: 1-383
Cow position:
Alignm length: 397
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 8

Conread position: 1-383
Cow position:
Alignm length: 402
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 187

Conread position: 1-383
Cow position:
Alignm length: 400
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 185

Conread position: 1-383
Cow position:
Alignm length: 396
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 104

Conread position: 1-394
Cow position:
Alignm length: 404
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 70

Conread position: 1-394
Cow position:
Alignm length: 412
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 98

Conread position: 1-394
Cow position:
Alignm length: 412
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 183

Conread position: 1-409
Cow position:
Alignm length: 424
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 51

Conread position: 2-324
Cow position:
Alignm length: 328
Alignm identity: 217
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 26, 32

Conread position: 2-324
Cow position:
Alignm length: 329
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 181

Conread position: 2-331
Cow position:
Alignm length: 340
Alignm identity: 235
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 17, 88

Conread position: 2-331
Cow position:
Alignm length: 333
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 253

Conread position: 2-331
Cow position:
Alignm length: 336
Alignm identity: 231
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 215, 182

Conread position: 2-338
Cow position:
Alignm length: 362
Alignm identity: 261
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 49, 88

Conread position: 3-383
Cow position:
Alignm length: 395
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 261, 67

Conread position: 7-394
Cow position:
Alignm length: 408
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 85

Conread position: 10-331
Cow position:
Alignm length: 327
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 37

Conread position: 10-383
Cow position:
Alignm length: 389
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 174

Conread position: 15-383
Cow position:
Alignm length: 384
Alignm identity: 260
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 196, 168

Conread position: 26-383
Cow position:
Alignm length: 365
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 160

Conread position: 28-331
Cow position:
Alignm length: 315
Alignm identity: 224
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 42, 103

Conread position: 35-383
Cow position:
Alignm length: 356
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 149

Conread position: 39-383
Cow position:
Alignm length: 355
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 286, 145

Conread position: 43-292
Cow position:
Alignm length: 251
Alignm identity: 176
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 204, 21

Conread position: 55-375
Cow position:
Alignm length: 345
Alignm identity: 250
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 138, 25

Conread position: 71-323
Cow position:
Alignm length: 255
Alignm identity: 173
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 146, 30

Conread position: 81-383
Cow position:
Alignm length: 314
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 244, 6

Conread position: 88-394
Cow position:
Alignm length: 327
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 95

Conread position: 96-383
Cow position:
Alignm length: 303
Alignm identity: 217
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 158, 88

Conread position: 109-383
Cow position:
Alignm length: 288
Alignm identity: 206
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 108, 6

Conread position: 112-337
Cow position:
Alignm length: 237
Alignm identity: 172
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 109, 62

Conread position: 122-383
Cow position:
Alignm length: 276
Alignm identity: 205
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 97, 62

Conread position: 123-383
Cow position:
Alignm length: 275
Alignm identity: 198
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 124, 29

Conread position: 168-383
Cow position:
Alignm length: 228
Alignm identity: 164
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 42, 15

Conread position: 228-371
Cow position:
Alignm length: 146
Alignm identity: 114
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 103, 26

Conread position: 239-429
Cow position:
Alignm length: 202
Alignm identity: 145
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 55, 196

Show alignments to all cow chromosomes.