Cow genome map

Conread name: Spl1-SPL01C050096

Conread position: 1-212
Cow position: chr10:21730998-21730788 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 155
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 151, 0

Conread position: 1-251
Cow position: chr10:11699093-11699344 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 183
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 213, 182

Conread position: 1-255
Cow position: chr10:125242-125496 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 183

Conread position: 1-301
Cow position: chr10:47083919-47083618 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 183

Conread position: 1-304
Cow position: chr10:8290828-8291137 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 183

Conread position: 1-323
Cow position: chr10:58597234-58597540 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 230
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 50, 67

Conread position: 1-325
Cow position: chr10:21739900-21739575 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 226
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 96, 89

Conread position: 1-325
Cow position: chr10:50135411-50135741 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 191

Conread position: 1-330
Cow position: chr10:11684796-11684456 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 237
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 211, 321

Conread position: 1-331
Cow position: chr10:27664415-27664084 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 183

Conread position: 1-331
Cow position: chr10:28642383-28642714 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 183

Conread position: 1-331
Cow position: chr10:34286107-34286438 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 185

Conread position: 1-336
Cow position: chr10:186940-187282 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 236
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 65, 94

Conread position: 1-349
Cow position: chr10:19840530-19840881 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 124

Conread position: 1-380
Cow position: chr10:22102088-22102476 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 13

Conread position: 1-383
Cow position: chr10:279758-279365 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 182

Conread position: 1-383
Cow position: chr10:1378356-1378748 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 183

Conread position: 1-383
Cow position: chr10:2120162-2119771 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 40

Conread position: 1-383
Cow position: chr10:3542213-3541831 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 29

Conread position: 1-383
Cow position: chr10:7281238-7280860 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 104

Conread position: 1-383
Cow position: chr10:14334999-14334603 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 183

Conread position: 1-383
Cow position: chr10:14804684-14805088 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 191

Conread position: 1-383
Cow position: chr10:16926384-16926775 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 121

Conread position: 1-383
Cow position: chr10:21399821-21399436 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 29

Conread position: 1-383
Cow position: chr10:29845798-29845403 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 183

Conread position: 1-383
Cow position: chr10:32701578-32701970 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 81

Conread position: 1-383
Cow position: chr10:38344510-38344117 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 183

Conread position: 1-383
Cow position: chr10:38537647-38537254 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 81

Conread position: 1-383
Cow position: chr10:38545061-38544683 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 100

Conread position: 1-383
Cow position: chr10:39180639-39181038 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 277
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 213, 182

Conread position: 1-383
Cow position: chr10:41567949-41568343 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 182

Conread position: 1-383
Cow position: chr10:41877766-41878165 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 184

Conread position: 1-383
Cow position: chr10:44708766-44708369 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 183

Conread position: 1-383
Cow position: chr10:47907780-47908176 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 183

Conread position: 1-383
Cow position: chr10:55094116-55094513 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 183

Conread position: 1-383
Cow position: chr10:57501669-57502052 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 87

Conread position: 1-386
Cow position: chr10:40151396-40151007 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 183

Conread position: 3-242
Cow position: chr10:39815687-39815447 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 172
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 206, 225

Conread position: 3-331
Cow position: chr10:1665683-1665354 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 181

Conread position: 3-383
Cow position: chr10:8326461-8326084 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 21

Conread position: 3-383
Cow position: chr10:19495428-19495046 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 89

Conread position: 3-383
Cow position: chr10:21480775-21481176 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 128

Conread position: 4-331
Cow position: chr10:29011799-29011475 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 236
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 193, 28

Conread position: 4-383
Cow position: chr10:20370224-20369832 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 35

Conread position: 16-388
Cow position: chr10:42111290-42111668 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 164

Conread position: 21-439
Cow position: chr10:14862555-14862995 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 13

Conread position: 26-383
Cow position: chr10:24311491-24311121 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 248
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 133, 26

Conread position: 36-383
Cow position: chr10:38849187-38849532 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 252
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 20, 67

Conread position: 44-383
Cow position: chr10:19512486-19512823 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 36

Conread position: 53-383
Cow position: chr10:17433247-17433599 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 0

Conread position: 60-383
Cow position: chr10:42752039-42752376 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 124

Conread position: 66-383
Cow position: chr10:64145846-64146171 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 236
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 151, 11

Conread position: 71-383
Cow position: chr10:58097097-58096783 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 219
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 144, 112

Conread position: 86-335
Cow position: chr10:21899267-21899019 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 184
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 176, 98

Conread position: 114-331
Cow position: chr10:28256454-28256236 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 163
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 98, 70

Conread position: 132-356
Cow position: chr10:6231-6453 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 165
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 86, 10

Conread position: 167-323
Cow position: chr10:20375816-20375663 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 121
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 79, 17

Conread position: 171-338
Cow position: chr10:51782393-51782226 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 125
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 49, 100

Conread position: 197-383
Cow position: chr10:62407737-62407535 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 145
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 21, 0

Conread position: 439-628
Cow position: chr10:39875436-39875248 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 140
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 102, 155

Conread position: 439-631
Cow position: chr10:11221419-11221606 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 141
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 14, 21

Show alignments to all cow chromosomes.