Cow genome map
Conread name: | Spl1-SPL01C050096 |
Conread position: | 1-212 |
Cow position: | chr10:21730998-21730788 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 155 |
Alignm E-value: | 3e-36 |
Alignm gaps (pig, cow): | 151, 0 |
Conread position: | 1-251 |
Cow position: | chr10:11699093-11699344 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 183 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 213, 182 |
Conread position: | 1-255 |
Cow position: | chr10:125242-125496 (view UCSC Genome Browser custom track) |
Alignm length: | 256 |
Alignm identity: | 197 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 213, 183 |
Conread position: | 1-301 |
Cow position: | chr10:47083919-47083618 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 216 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 216, 183 |
Conread position: | 1-304 |
Cow position: | chr10:8290828-8291137 (view UCSC Genome Browser custom track) |
Alignm length: | 312 |
Alignm identity: | 235 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 217, 183 |
Conread position: | 1-323 |
Cow position: | chr10:58597234-58597540 (view UCSC Genome Browser custom track) |
Alignm length: | 326 |
Alignm identity: | 230 |
Alignm E-value: | 3e-37 |
Alignm gaps (pig, cow): | 50, 67 |
Conread position: | 1-325 |
Cow position: | chr10:21739900-21739575 (view UCSC Genome Browser custom track) |
Alignm length: | 328 |
Alignm identity: | 226 |
Alignm E-value: | 7.00649e-45 |
Alignm gaps (pig, cow): | 96, 89 |
Conread position: | 1-325 |
Cow position: | chr10:50135411-50135741 (view UCSC Genome Browser custom track) |
Alignm length: | 337 |
Alignm identity: | 256 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 134, 191 |
Conread position: | 1-330 |
Cow position: | chr10:11684796-11684456 (view UCSC Genome Browser custom track) |
Alignm length: | 342 |
Alignm identity: | 237 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 211, 321 |
Conread position: | 1-331 |
Cow position: | chr10:27664415-27664084 (view UCSC Genome Browser custom track) |
Alignm length: | 334 |
Alignm identity: | 237 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 216, 183 |
Conread position: | 1-331 |
Cow position: | chr10:28642383-28642714 (view UCSC Genome Browser custom track) |
Alignm length: | 334 |
Alignm identity: | 232 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 216, 183 |
Conread position: | 1-331 |
Cow position: | chr10:34286107-34286438 (view UCSC Genome Browser custom track) |
Alignm length: | 334 |
Alignm identity: | 239 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 216, 185 |
Conread position: | 1-336 |
Cow position: | chr10:186940-187282 (view UCSC Genome Browser custom track) |
Alignm length: | 348 |
Alignm identity: | 236 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 65, 94 |
Conread position: | 1-349 |
Cow position: | chr10:19840530-19840881 (view UCSC Genome Browser custom track) |
Alignm length: | 355 |
Alignm identity: | 252 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 119, 124 |
Conread position: | 1-380 |
Cow position: | chr10:22102088-22102476 (view UCSC Genome Browser custom track) |
Alignm length: | 392 |
Alignm identity: | 284 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 216, 13 |
Conread position: | 1-383 |
Cow position: | chr10:279758-279365 (view UCSC Genome Browser custom track) |
Alignm length: | 395 |
Alignm identity: | 283 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 215, 182 |
Conread position: | 1-383 |
Cow position: | chr10:1378356-1378748 (view UCSC Genome Browser custom track) |
Alignm length: | 394 |
Alignm identity: | 298 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 218, 183 |
Conread position: | 1-383 |
Cow position: | chr10:2120162-2119771 (view UCSC Genome Browser custom track) |
Alignm length: | 398 |
Alignm identity: | 290 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 216, 40 |
Conread position: | 1-383 |
Cow position: | chr10:3542213-3541831 (view UCSC Genome Browser custom track) |
Alignm length: | 393 |
Alignm identity: | 281 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 216, 29 |
Conread position: | 1-383 |
Cow position: | chr10:7281238-7280860 (view UCSC Genome Browser custom track) |
Alignm length: | 389 |
Alignm identity: | 283 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 216, 104 |
Conread position: | 1-383 |
Cow position: | chr10:14334999-14334603 (view UCSC Genome Browser custom track) |
Alignm length: | 398 |
Alignm identity: | 295 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 216, 183 |
Conread position: | 1-383 |
Cow position: | chr10:14804684-14805088 (view UCSC Genome Browser custom track) |
Alignm length: | 406 |
Alignm identity: | 285 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 144, 191 |
Conread position: | 1-383 |
Cow position: | chr10:16926384-16926775 (view UCSC Genome Browser custom track) |
Alignm length: | 399 |
Alignm identity: | 289 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 216, 121 |
Conread position: | 1-383 |
Cow position: | chr10:21399821-21399436 (view UCSC Genome Browser custom track) |
Alignm length: | 389 |
Alignm identity: | 276 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 216, 29 |
Conread position: | 1-383 |
Cow position: | chr10:29845798-29845403 (view UCSC Genome Browser custom track) |
Alignm length: | 398 |
Alignm identity: | 297 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 216, 183 |
Conread position: | 1-383 |
Cow position: | chr10:32701578-32701970 (view UCSC Genome Browser custom track) |
Alignm length: | 398 |
Alignm identity: | 296 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 216, 81 |
Conread position: | 1-383 |
Cow position: | chr10:38344510-38344117 (view UCSC Genome Browser custom track) |
Alignm length: | 398 |
Alignm identity: | 293 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 216, 183 |
Conread position: | 1-383 |
Cow position: | chr10:38537647-38537254 (view UCSC Genome Browser custom track) |
Alignm length: | 399 |
Alignm identity: | 293 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 218, 81 |
Conread position: | 1-383 |
Cow position: | chr10:38545061-38544683 (view UCSC Genome Browser custom track) |
Alignm length: | 390 |
Alignm identity: | 293 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 216, 100 |
Conread position: | 1-383 |
Cow position: | chr10:39180639-39181038 (view UCSC Genome Browser custom track) |
Alignm length: | 405 |
Alignm identity: | 277 |
Alignm E-value: | 1.96182e-44 |
Alignm gaps (pig, cow): | 213, 182 |
Conread position: | 1-383 |
Cow position: | chr10:41567949-41568343 (view UCSC Genome Browser custom track) |
Alignm length: | 396 |
Alignm identity: | 278 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 216, 182 |
Conread position: | 1-383 |
Cow position: | chr10:41877766-41878165 (view UCSC Genome Browser custom track) |
Alignm length: | 401 |
Alignm identity: | 280 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 106, 184 |
Conread position: | 1-383 |
Cow position: | chr10:44708766-44708369 (view UCSC Genome Browser custom track) |
Alignm length: | 401 |
Alignm identity: | 278 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 209, 183 |
Conread position: | 1-383 |
Cow position: | chr10:47907780-47908176 (view UCSC Genome Browser custom track) |
Alignm length: | 398 |
Alignm identity: | 281 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 216, 183 |
Conread position: | 1-383 |
Cow position: | chr10:55094116-55094513 (view UCSC Genome Browser custom track) |
Alignm length: | 399 |
Alignm identity: | 284 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 216, 183 |
Conread position: | 1-383 |
Cow position: | chr10:57501669-57502052 (view UCSC Genome Browser custom track) |
Alignm length: | 389 |
Alignm identity: | 288 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 87 |
Conread position: | 1-386 |
Cow position: | chr10:40151396-40151007 (view UCSC Genome Browser custom track) |
Alignm length: | 392 |
Alignm identity: | 301 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 218, 183 |
Conread position: | 3-242 |
Cow position: | chr10:39815687-39815447 (view UCSC Genome Browser custom track) |
Alignm length: | 243 |
Alignm identity: | 172 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 206, 225 |
Conread position: | 3-331 |
Cow position: | chr10:1665683-1665354 (view UCSC Genome Browser custom track) |
Alignm length: | 331 |
Alignm identity: | 231 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 213, 181 |
Conread position: | 3-383 |
Cow position: | chr10:8326461-8326084 (view UCSC Genome Browser custom track) |
Alignm length: | 389 |
Alignm identity: | 270 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 214, 21 |
Conread position: | 3-383 |
Cow position: | chr10:19495428-19495046 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 275 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 214, 89 |
Conread position: | 3-383 |
Cow position: | chr10:21480775-21481176 (view UCSC Genome Browser custom track) |
Alignm length: | 406 |
Alignm identity: | 287 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 62, 128 |
Conread position: | 4-331 |
Cow position: | chr10:29011799-29011475 (view UCSC Genome Browser custom track) |
Alignm length: | 334 |
Alignm identity: | 236 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 193, 28 |
Conread position: | 4-383 |
Cow position: | chr10:20370224-20369832 (view UCSC Genome Browser custom track) |
Alignm length: | 399 |
Alignm identity: | 278 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 35 |
Conread position: | 16-388 |
Cow position: | chr10:42111290-42111668 (view UCSC Genome Browser custom track) |
Alignm length: | 387 |
Alignm identity: | 277 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 206, 164 |
Conread position: | 21-439 |
Cow position: | chr10:14862555-14862995 (view UCSC Genome Browser custom track) |
Alignm length: | 451 |
Alignm identity: | 327 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 48, 13 |
Conread position: | 26-383 |
Cow position: | chr10:24311491-24311121 (view UCSC Genome Browser custom track) |
Alignm length: | 374 |
Alignm identity: | 248 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 133, 26 |
Conread position: | 36-383 |
Cow position: | chr10:38849187-38849532 (view UCSC Genome Browser custom track) |
Alignm length: | 364 |
Alignm identity: | 252 |
Alignm E-value: | 6e-33 |
Alignm gaps (pig, cow): | 20, 67 |
Conread position: | 44-383 |
Cow position: | chr10:19512486-19512823 (view UCSC Genome Browser custom track) |
Alignm length: | 344 |
Alignm identity: | 256 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 173, 36 |
Conread position: | 53-383 |
Cow position: | chr10:17433247-17433599 (view UCSC Genome Browser custom track) |
Alignm length: | 353 |
Alignm identity: | 258 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 130, 0 |
Conread position: | 60-383 |
Cow position: | chr10:42752039-42752376 (view UCSC Genome Browser custom track) |
Alignm length: | 339 |
Alignm identity: | 251 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 184, 124 |
Conread position: | 66-383 |
Cow position: | chr10:64145846-64146171 (view UCSC Genome Browser custom track) |
Alignm length: | 331 |
Alignm identity: | 236 |
Alignm E-value: | 7.00649e-45 |
Alignm gaps (pig, cow): | 151, 11 |
Conread position: | 71-383 |
Cow position: | chr10:58097097-58096783 (view UCSC Genome Browser custom track) |
Alignm length: | 316 |
Alignm identity: | 219 |
Alignm E-value: | 7.00649e-45 |
Alignm gaps (pig, cow): | 144, 112 |
Conread position: | 86-335 |
Cow position: | chr10:21899267-21899019 (view UCSC Genome Browser custom track) |
Alignm length: | 251 |
Alignm identity: | 184 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 176, 98 |
Conread position: | 114-331 |
Cow position: | chr10:28256454-28256236 (view UCSC Genome Browser custom track) |
Alignm length: | 221 |
Alignm identity: | 163 |
Alignm E-value: | 9e-36 |
Alignm gaps (pig, cow): | 98, 70 |
Conread position: | 132-356 |
Cow position: | chr10:6231-6453 (view UCSC Genome Browser custom track) |
Alignm length: | 229 |
Alignm identity: | 165 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 86, 10 |
Conread position: | 167-323 |
Cow position: | chr10:20375816-20375663 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 121 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 79, 17 |
Conread position: | 171-338 |
Cow position: | chr10:51782393-51782226 (view UCSC Genome Browser custom track) |
Alignm length: | 171 |
Alignm identity: | 125 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 49, 100 |
Conread position: | 197-383 |
Cow position: | chr10:62407737-62407535 (view UCSC Genome Browser custom track) |
Alignm length: | 203 |
Alignm identity: | 145 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 21, 0 |
Conread position: | 439-628 |
Cow position: | chr10:39875436-39875248 (view UCSC Genome Browser custom track) |
Alignm length: | 194 |
Alignm identity: | 140 |
Alignm E-value: | 8e-25 |
Alignm gaps (pig, cow): | 102, 155 |
Conread position: | 439-631 |
Cow position: | chr10:11221419-11221606 (view UCSC Genome Browser custom track) |
Alignm length: | 195 |
Alignm identity: | 141 |
Alignm E-value: | 8e-25 |
Alignm gaps (pig, cow): | 14, 21 |
Show alignments to all cow chromosomes.