Cow genome map
Conread name: | Spl1-SPL01C050096 |
Conread position: | 1-207 |
Cow position: | chr13:30244125-30243921 (view UCSC Genome Browser custom track) |
Alignm length: | 207 |
Alignm identity: | 151 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 168, 0 |
Conread position: | 1-326 |
Cow position: | chr13:42218369-42218031 (view UCSC Genome Browser custom track) |
Alignm length: | 340 |
Alignm identity: | 240 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 121, 323 |
Conread position: | 1-331 |
Cow position: | chr13:3056580-3056249 (view UCSC Genome Browser custom track) |
Alignm length: | 334 |
Alignm identity: | 231 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 216, 183 |
Conread position: | 1-331 |
Cow position: | chr13:17331206-17330875 (view UCSC Genome Browser custom track) |
Alignm length: | 335 |
Alignm identity: | 232 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 212, 33 |
Conread position: | 1-331 |
Cow position: | chr13:21839644-21839315 (view UCSC Genome Browser custom track) |
Alignm length: | 333 |
Alignm identity: | 238 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 211, 250 |
Conread position: | 1-331 |
Cow position: | chr13:34424317-34424648 (view UCSC Genome Browser custom track) |
Alignm length: | 334 |
Alignm identity: | 239 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 216, 185 |
Conread position: | 1-331 |
Cow position: | chr13:52646320-52645989 (view UCSC Genome Browser custom track) |
Alignm length: | 333 |
Alignm identity: | 235 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 221, 185 |
Conread position: | 1-372 |
Cow position: | chr13:26844584-26844951 (view UCSC Genome Browser custom track) |
Alignm length: | 383 |
Alignm identity: | 289 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 218, 89 |
Conread position: | 1-375 |
Cow position: | chr13:2388259-2387865 (view UCSC Genome Browser custom track) |
Alignm length: | 396 |
Alignm identity: | 275 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 216, 183 |
Conread position: | 1-380 |
Cow position: | chr13:32984795-32984395 (view UCSC Genome Browser custom track) |
Alignm length: | 402 |
Alignm identity: | 278 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 216, 182 |
Conread position: | 1-383 |
Cow position: | chr13:4484353-4484746 (view UCSC Genome Browser custom track) |
Alignm length: | 399 |
Alignm identity: | 290 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 216, 104 |
Conread position: | 1-383 |
Cow position: | chr13:9045333-9045717 (view UCSC Genome Browser custom track) |
Alignm length: | 396 |
Alignm identity: | 289 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 217, 75 |
Conread position: | 1-383 |
Cow position: | chr13:13900425-13900819 (view UCSC Genome Browser custom track) |
Alignm length: | 397 |
Alignm identity: | 300 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 216, 24 |
Conread position: | 1-383 |
Cow position: | chr13:30278179-30278564 (view UCSC Genome Browser custom track) |
Alignm length: | 396 |
Alignm identity: | 271 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 216, 13 |
Conread position: | 1-383 |
Cow position: | chr13:32545936-32546341 (view UCSC Genome Browser custom track) |
Alignm length: | 407 |
Alignm identity: | 291 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 216, 183 |
Conread position: | 1-383 |
Cow position: | chr13:34325004-34324604 (view UCSC Genome Browser custom track) |
Alignm length: | 402 |
Alignm identity: | 300 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 210, 183 |
Conread position: | 1-383 |
Cow position: | chr13:47229449-47229049 (view UCSC Genome Browser custom track) |
Alignm length: | 403 |
Alignm identity: | 283 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 216, 183 |
Conread position: | 1-383 |
Cow position: | chr13:50110007-50110403 (view UCSC Genome Browser custom track) |
Alignm length: | 399 |
Alignm identity: | 275 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 209, 182 |
Conread position: | 1-393 |
Cow position: | chr13:34765893-34765499 (view UCSC Genome Browser custom track) |
Alignm length: | 411 |
Alignm identity: | 292 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 243, 62 |
Conread position: | 1-394 |
Cow position: | chr13:3653764-3653354 (view UCSC Genome Browser custom track) |
Alignm length: | 412 |
Alignm identity: | 313 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 218, 182 |
Conread position: | 1-394 |
Cow position: | chr13:4941946-4942348 (view UCSC Genome Browser custom track) |
Alignm length: | 412 |
Alignm identity: | 297 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 37, 53 |
Conread position: | 1-394 |
Cow position: | chr13:34041778-34041373 (view UCSC Genome Browser custom track) |
Alignm length: | 410 |
Alignm identity: | 305 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 216, 180 |
Conread position: | 1-394 |
Cow position: | chr13:43982532-43982138 (view UCSC Genome Browser custom track) |
Alignm length: | 407 |
Alignm identity: | 298 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 218, 48 |
Conread position: | 1-429 |
Cow position: | chr13:17309028-17309473 (view UCSC Genome Browser custom track) |
Alignm length: | 447 |
Alignm identity: | 309 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 213, 182 |
Conread position: | 4-383 |
Cow position: | chr13:6667572-6667181 (view UCSC Genome Browser custom track) |
Alignm length: | 396 |
Alignm identity: | 289 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 214, 20 |
Conread position: | 6-383 |
Cow position: | chr13:34938038-34938402 (view UCSC Genome Browser custom track) |
Alignm length: | 380 |
Alignm identity: | 285 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 213, 35 |
Conread position: | 7-356 |
Cow position: | chr13:20541482-20541139 (view UCSC Genome Browser custom track) |
Alignm length: | 353 |
Alignm identity: | 264 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 210, 52 |
Conread position: | 7-380 |
Cow position: | chr13:31611745-31611362 (view UCSC Genome Browser custom track) |
Alignm length: | 388 |
Alignm identity: | 290 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 210, 176 |
Conread position: | 7-383 |
Cow position: | chr13:16254822-16254433 (view UCSC Genome Browser custom track) |
Alignm length: | 391 |
Alignm identity: | 291 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 209, 176 |
Conread position: | 11-383 |
Cow position: | chr13:11798145-11797768 (view UCSC Genome Browser custom track) |
Alignm length: | 387 |
Alignm identity: | 282 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 205, 172 |
Conread position: | 25-383 |
Cow position: | chr13:35757852-35758234 (view UCSC Genome Browser custom track) |
Alignm length: | 384 |
Alignm identity: | 279 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 192, 159 |
Conread position: | 30-383 |
Cow position: | chr13:5625421-5625036 (view UCSC Genome Browser custom track) |
Alignm length: | 387 |
Alignm identity: | 271 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 98, 155 |
Conread position: | 37-439 |
Cow position: | chr13:30654789-30654362 (view UCSC Genome Browser custom track) |
Alignm length: | 429 |
Alignm identity: | 317 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 179, 149 |
Conread position: | 38-331 |
Cow position: | chr13:21696844-21697138 (view UCSC Genome Browser custom track) |
Alignm length: | 297 |
Alignm identity: | 212 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 179, 146 |
Conread position: | 46-383 |
Cow position: | chr13:25692285-25692628 (view UCSC Genome Browser custom track) |
Alignm length: | 346 |
Alignm identity: | 250 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 279, 137 |
Conread position: | 47-383 |
Cow position: | chr13:34154159-34153807 (view UCSC Genome Browser custom track) |
Alignm length: | 354 |
Alignm identity: | 268 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 171, 136 |
Conread position: | 96-394 |
Cow position: | chr13:31733239-31732925 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 222 |
Alignm E-value: | 9e-37 |
Alignm gaps (pig, cow): | 121, 88 |
Conread position: | 114-380 |
Cow position: | chr13:43590000-43590278 (view UCSC Genome Browser custom track) |
Alignm length: | 282 |
Alignm identity: | 218 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 105, 70 |
Conread position: | 123-383 |
Cow position: | chr13:14402420-14402146 (view UCSC Genome Browser custom track) |
Alignm length: | 276 |
Alignm identity: | 201 |
Alignm E-value: | 1e-39 |
Alignm gaps (pig, cow): | 94, 61 |
Conread position: | 150-323 |
Cow position: | chr13:47861532-47861705 (view UCSC Genome Browser custom track) |
Alignm length: | 177 |
Alignm identity: | 129 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 70, 11 |
Show alignments to all cow chromosomes.