Cow genome map

Conread name: Spl1-SPL01C050096

Conread position: 1-302
Cow position:
Alignm length: 307
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 47

Conread position: 1-304
Cow position:
Alignm length: 307
Alignm identity: 204
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 219, 99

Conread position: 1-309
Cow position:
Alignm length: 310
Alignm identity: 207
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 246, 51

Conread position: 1-309
Cow position:
Alignm length: 313
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 77

Conread position: 1-331
Cow position:
Alignm length: 334
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 182

Conread position: 1-331
Cow position:
Alignm length: 334
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 183

Conread position: 1-331
Cow position:
Alignm length: 342
Alignm identity: 237
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 174, 89

Conread position: 1-331
Cow position:
Alignm length: 334
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 183

Conread position: 1-331
Cow position:
Alignm length: 338
Alignm identity: 234
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 208, 183

Conread position: 1-331
Cow position:
Alignm length: 333
Alignm identity: 220
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 173, 77

Conread position: 1-331
Cow position:
Alignm length: 344
Alignm identity: 240
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 182, 75

Conread position: 1-338
Cow position:
Alignm length: 348
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 186

Conread position: 1-350
Cow position:
Alignm length: 356
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 29

Conread position: 1-367
Cow position:
Alignm length: 368
Alignm identity: 246
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 163, 22

Conread position: 1-375
Cow position:
Alignm length: 400
Alignm identity: 276
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 182, 234

Conread position: 1-375
Cow position:
Alignm length: 390
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 182

Conread position: 1-376
Cow position:
Alignm length: 391
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 249, 183

Conread position: 1-383
Cow position:
Alignm length: 387
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 15

Conread position: 1-383
Cow position:
Alignm length: 395
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 55

Conread position: 1-383
Cow position:
Alignm length: 412
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 238

Conread position: 1-383
Cow position:
Alignm length: 394
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 182

Conread position: 1-383
Cow position:
Alignm length: 397
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 173

Conread position: 1-383
Cow position:
Alignm length: 393
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 183

Conread position: 1-383
Cow position:
Alignm length: 396
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 184

Conread position: 1-383
Cow position:
Alignm length: 402
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 113

Conread position: 1-383
Cow position:
Alignm length: 397
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 183

Conread position: 1-383
Cow position:
Alignm length: 407
Alignm identity: 280
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 170, 89

Conread position: 1-383
Cow position:
Alignm length: 390
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 65

Conread position: 1-383
Cow position:
Alignm length: 399
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 47

Conread position: 1-383
Cow position:
Alignm length: 399
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 182

Conread position: 1-383
Cow position:
Alignm length: 396
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 46

Conread position: 1-383
Cow position:
Alignm length: 400
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 182

Conread position: 1-383
Cow position:
Alignm length: 400
Alignm identity: 274
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 246, 182

Conread position: 1-383
Cow position:
Alignm length: 389
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 49

Conread position: 1-383
Cow position:
Alignm length: 399
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 38

Conread position: 1-383
Cow position:
Alignm length: 401
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 35

Conread position: 1-383
Cow position:
Alignm length: 386
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 183

Conread position: 1-383
Cow position:
Alignm length: 399
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 70

Conread position: 1-383
Cow position:
Alignm length: 399
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 58

Conread position: 1-383
Cow position:
Alignm length: 409
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 13

Conread position: 1-383
Cow position:
Alignm length: 394
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 183

Conread position: 1-383
Cow position:
Alignm length: 399
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 186

Conread position: 1-393
Cow position:
Alignm length: 418
Alignm identity: 270
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 91, 41

Conread position: 1-394
Cow position:
Alignm length: 413
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 165

Conread position: 1-394
Cow position:
Alignm length: 412
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 76

Conread position: 1-394
Cow position:
Alignm length: 414
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 182

Conread position: 2-295
Cow position:
Alignm length: 297
Alignm identity: 214
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 215, 10

Conread position: 2-295
Cow position:
Alignm length: 297
Alignm identity: 215
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 215, 10

Conread position: 2-375
Cow position:
Alignm length: 390
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 183

Conread position: 2-394
Cow position:
Alignm length: 405
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 90

Conread position: 3-372
Cow position:
Alignm length: 393
Alignm identity: 271
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 216, 77

Conread position: 3-383
Cow position:
Alignm length: 405
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 181

Conread position: 4-338
Cow position:
Alignm length: 337
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 155

Conread position: 7-383
Cow position:
Alignm length: 393
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 177

Conread position: 9-379
Cow position:
Alignm length: 397
Alignm identity: 276
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 208, 62

Conread position: 9-383
Cow position:
Alignm length: 392
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 136

Conread position: 25-331
Cow position:
Alignm length: 310
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 159

Conread position: 27-383
Cow position:
Alignm length: 374
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 179

Conread position: 47-439
Cow position:
Alignm length: 418
Alignm identity: 286
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 140, 64

Conread position: 52-383
Cow position:
Alignm length: 335
Alignm identity: 228
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 165, 25

Conread position: 54-383
Cow position:
Alignm length: 345
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 130

Conread position: 57-383
Cow position:
Alignm length: 345
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 126

Conread position: 66-383
Cow position:
Alignm length: 326
Alignm identity: 236
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 150, 32

Conread position: 66-383
Cow position:
Alignm length: 335
Alignm identity: 238
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 143, 117

Conread position: 82-324
Cow position:
Alignm length: 254
Alignm identity: 176
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 135, 101

Conread position: 88-383
Cow position:
Alignm length: 313
Alignm identity: 223
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 129, 96

Conread position: 90-383
Cow position:
Alignm length: 312
Alignm identity: 230
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 17, 95

Conread position: 91-324
Cow position:
Alignm length: 243
Alignm identity: 169
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 94, 0

Conread position: 106-377
Cow position:
Alignm length: 286
Alignm identity: 205
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 113, 31

Conread position: 136-383
Cow position:
Alignm length: 264
Alignm identity: 185
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 83, 48

Conread position: 137-331
Cow position:
Alignm length: 198
Alignm identity: 143
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 80, 48

Conread position: 145-429
Cow position:
Alignm length: 300
Alignm identity: 201
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 72, 39

Conread position: 156-394
Cow position:
Alignm length: 259
Alignm identity: 192
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 63, 0

Conread position: 176-394
Cow position:
Alignm length: 232
Alignm identity: 167
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 76, 41

Conread position: 179-439
Cow position:
Alignm length: 290
Alignm identity: 207
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 40, 85

Conread position: 463-620
Cow position:
Alignm length: 163
Alignm identity: 121
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 77, 107

Show alignments to all cow chromosomes.