Cow genome map


           Conread name:
           Spl1-SPL01C050096
        

               Conread position:
               1-212
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               152
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               186, 110
               

               Conread position:
               1-236
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               216, 65
               

               Conread position:
               1-249
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               213, 0
               

               Conread position:
               1-261
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 191
               

               Conread position:
               1-282
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               216, 24
               

               Conread position:
               1-283
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               213, 79
               

               Conread position:
               1-302
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               216, 86
               

               Conread position:
               1-309
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               218, 24
               

               Conread position:
               1-325
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               216, 173
               

               Conread position:
               1-331
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               216, 39
               

               Conread position:
               1-331
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               240
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               174, 322
               

               Conread position:
               1-350
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               209, 21
               

               Conread position:
               1-351
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               215, 30
               

               Conread position:
               1-382
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               217, 161
               

               Conread position:
               1-382
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               221, 183
               

               Conread position:
               1-383
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               218, 81
               

               Conread position:
               1-383
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               208, 97
               

               Conread position:
               1-383
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               217, 161
               

               Conread position:
               1-383
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               244, 182
               

               Conread position:
               1-383
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               216, 183
               

               Conread position:
               1-383
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               218, 183
               

               Conread position:
               1-383
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               218, 183
               

               Conread position:
               1-383
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               216, 117
               

               Conread position:
               1-383
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 71
               

               Conread position:
               1-383
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 198
               

               Conread position:
               1-383
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 184
               

               Conread position:
               1-383
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               217, 183
               

               Conread position:
               1-383
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 123
               

               Conread position:
               1-383
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               215, 183
               

               Conread position:
               1-383
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               216, 183
               

               Conread position:
               1-383
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 184
               

               Conread position:
               1-383
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 184
               

               Conread position:
               1-383
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               141, 81
               

               Conread position:
               1-383
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               216, 182
               

               Conread position:
               1-383
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 86
               

               Conread position:
               1-383
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               219, 101
               

               Conread position:
               1-394
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               216, 183
               

               Conread position:
               1-394
               

               Cow position:
               
               

               Alignm length:
               412
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               217, 182
               

               Conread position:
               1-394
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               215, 185
               

               Conread position:
               1-394
               

               Cow position:
               
               

               Alignm length:
               414
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               217, 168
               

               Conread position:
               1-439
               

               Cow position:
               
               

               Alignm length:
               478
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               213, 89
               

               Conread position:
               2-383
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               220, 181
               

               Conread position:
               3-383
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               274
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               191, 27
               

               Conread position:
               7-353
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               210, 54
               

               Conread position:
               33-394
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               272
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               88, 25
               

               Conread position:
               34-382
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               187, 10
               

               Conread position:
               70-383
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               149, 113
               

               Conread position:
               71-336
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               85, 114
               

               Conread position:
               72-383
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               224
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               146, 40
               

               Conread position:
               74-377
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               225
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               125, 110
               

               Conread position:
               82-383
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               229
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               142, 21
               

               Conread position:
               97-383
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               221
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               119, 87
               

               Conread position:
               102-383
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               221
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               36, 83
               

               Conread position:
               102-383
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               214
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               117, 81
               

               Conread position:
               134-330
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               108, 49
               

               Conread position:
               138-383
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               193
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               81, 46
               

               Conread position:
               149-383
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               190
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               67, 34
               

               Conread position:
               186-382
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               243-394
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               127
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               463-626
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               82, 128
               
Show alignments to all cow chromosomes.