Cow genome map

Conread name: Spl1-SPL01C050096

Conread position: 1-257
Cow position: chr19:52150959-52150704 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 184
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 211, 118

Conread position: 1-323
Cow position: chr19:75376-75065 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 231
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 182, 65

Conread position: 1-330
Cow position: chr19:43144584-43144915 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 226
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 82, 323

Conread position: 1-331
Cow position: chr19:32193888-32194230 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 239
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 214, 183

Conread position: 1-336
Cow position: chr19:7342941-7343277 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 183

Conread position: 1-375
Cow position: chr19:773472-773861 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 183

Conread position: 1-383
Cow position: chr19:39170-39568 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 185

Conread position: 1-383
Cow position: chr19:135917-135522 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 29

Conread position: 1-383
Cow position: chr19:1588339-1587968 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 118

Conread position: 1-383
Cow position: chr19:1656293-1656697 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 267
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 99, 55

Conread position: 1-383
Cow position: chr19:2273507-2273112 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 13

Conread position: 1-383
Cow position: chr19:4386498-4386883 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 81

Conread position: 1-383
Cow position: chr19:12773992-12774381 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 104

Conread position: 1-383
Cow position: chr19:28580784-28580393 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 104

Conread position: 1-383
Cow position: chr19:32211201-32210806 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 322

Conread position: 1-383
Cow position: chr19:33874300-33874695 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 183

Conread position: 1-383
Cow position: chr19:39184664-39184272 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 182

Conread position: 1-383
Cow position: chr19:39391383-39391778 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 183

Conread position: 1-383
Cow position: chr19:50723414-50723823 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 34

Conread position: 1-394
Cow position: chr19:438562-438157 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 20

Conread position: 1-429
Cow position: chr19:3138805-3139251 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 88

Conread position: 1-439
Cow position: chr19:33942479-33942922 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 185

Conread position: 2-325
Cow position: chr19:28594426-28594750 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 182

Conread position: 8-383
Cow position: chr19:28405826-28405432 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 176

Conread position: 13-383
Cow position: chr19:7489231-7489621 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 171

Conread position: 19-383
Cow position: chr19:167680-167289 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 263
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 20, 8

Conread position: 29-383
Cow position: chr19:11522263-11521898 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 51

Conread position: 31-265
Cow position: chr19:173137-173375 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 179
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 113, 159

Conread position: 34-383
Cow position: chr19:40851542-40851180 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 149

Conread position: 38-302
Cow position: chr19:204892-205159 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 196
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 26, 34

Conread position: 49-350
Cow position: chr19:20105647-20105947 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 215
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 168, 135

Conread position: 50-237
Cow position: chr19:39667817-39667638 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 145
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 53, 40

Conread position: 57-383
Cow position: chr19:5729803-5730140 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 127

Conread position: 82-241
Cow position: chr19:1490071-1489915 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 117
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 132, 99

Conread position: 82-305
Cow position: chr19:35379545-35379761 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 169
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 135, 101

Conread position: 82-324
Cow position: chr19:39096109-39096346 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 175
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 137, 12

Conread position: 127-383
Cow position: chr19:892624-892356 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 199
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 88, 57

Conread position: 145-326
Cow position: chr19:30756230-30756418 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 141
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 53, 39

Conread position: 163-383
Cow position: chr19:6713673-6713459 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 161
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 50, 20

Conread position: 196-383
Cow position: chr19:40816450-40816243 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 153
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 21, 0

Show alignments to all cow chromosomes.