Cow genome map
Conread name: | Spl1-SPL01C050096 |
Conread position: | 1-257 |
Cow position: | chr19:52150959-52150704 (view UCSC Genome Browser custom track) |
Alignm length: | 258 |
Alignm identity: | 184 |
Alignm E-value: | 4.00001e-40 |
Alignm gaps (pig, cow): | 211, 118 |
Conread position: | 1-323 |
Cow position: | chr19:75376-75065 (view UCSC Genome Browser custom track) |
Alignm length: | 331 |
Alignm identity: | 231 |
Alignm E-value: | 7e-36 |
Alignm gaps (pig, cow): | 182, 65 |
Conread position: | 1-330 |
Cow position: | chr19:43144584-43144915 (view UCSC Genome Browser custom track) |
Alignm length: | 333 |
Alignm identity: | 226 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 82, 323 |
Conread position: | 1-331 |
Cow position: | chr19:32193888-32194230 (view UCSC Genome Browser custom track) |
Alignm length: | 345 |
Alignm identity: | 239 |
Alignm E-value: | 1.00053e-42 |
Alignm gaps (pig, cow): | 214, 183 |
Conread position: | 1-336 |
Cow position: | chr19:7342941-7343277 (view UCSC Genome Browser custom track) |
Alignm length: | 339 |
Alignm identity: | 246 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 211, 183 |
Conread position: | 1-375 |
Cow position: | chr19:773472-773861 (view UCSC Genome Browser custom track) |
Alignm length: | 392 |
Alignm identity: | 281 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 216, 183 |
Conread position: | 1-383 |
Cow position: | chr19:39170-39568 (view UCSC Genome Browser custom track) |
Alignm length: | 400 |
Alignm identity: | 273 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 71, 185 |
Conread position: | 1-383 |
Cow position: | chr19:135917-135522 (view UCSC Genome Browser custom track) |
Alignm length: | 399 |
Alignm identity: | 294 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 152, 29 |
Conread position: | 1-383 |
Cow position: | chr19:1588339-1587968 (view UCSC Genome Browser custom track) |
Alignm length: | 384 |
Alignm identity: | 284 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 216, 118 |
Conread position: | 1-383 |
Cow position: | chr19:1656293-1656697 (view UCSC Genome Browser custom track) |
Alignm length: | 408 |
Alignm identity: | 267 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 99, 55 |
Conread position: | 1-383 |
Cow position: | chr19:2273507-2273112 (view UCSC Genome Browser custom track) |
Alignm length: | 401 |
Alignm identity: | 289 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 218, 13 |
Conread position: | 1-383 |
Cow position: | chr19:4386498-4386883 (view UCSC Genome Browser custom track) |
Alignm length: | 397 |
Alignm identity: | 294 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 216, 81 |
Conread position: | 1-383 |
Cow position: | chr19:12773992-12774381 (view UCSC Genome Browser custom track) |
Alignm length: | 397 |
Alignm identity: | 287 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 218, 104 |
Conread position: | 1-383 |
Cow position: | chr19:28580784-28580393 (view UCSC Genome Browser custom track) |
Alignm length: | 399 |
Alignm identity: | 288 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 216, 104 |
Conread position: | 1-383 |
Cow position: | chr19:32211201-32210806 (view UCSC Genome Browser custom track) |
Alignm length: | 397 |
Alignm identity: | 268 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 174, 322 |
Conread position: | 1-383 |
Cow position: | chr19:33874300-33874695 (view UCSC Genome Browser custom track) |
Alignm length: | 397 |
Alignm identity: | 289 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 218, 183 |
Conread position: | 1-383 |
Cow position: | chr19:39184664-39184272 (view UCSC Genome Browser custom track) |
Alignm length: | 394 |
Alignm identity: | 287 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 215, 182 |
Conread position: | 1-383 |
Cow position: | chr19:39391383-39391778 (view UCSC Genome Browser custom track) |
Alignm length: | 398 |
Alignm identity: | 293 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 215, 183 |
Conread position: | 1-383 |
Cow position: | chr19:50723414-50723823 (view UCSC Genome Browser custom track) |
Alignm length: | 412 |
Alignm identity: | 292 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 69, 34 |
Conread position: | 1-394 |
Cow position: | chr19:438562-438157 (view UCSC Genome Browser custom track) |
Alignm length: | 409 |
Alignm identity: | 298 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 216, 20 |
Conread position: | 1-429 |
Cow position: | chr19:3138805-3139251 (view UCSC Genome Browser custom track) |
Alignm length: | 451 |
Alignm identity: | 330 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 216, 88 |
Conread position: | 1-439 |
Cow position: | chr19:33942479-33942922 (view UCSC Genome Browser custom track) |
Alignm length: | 449 |
Alignm identity: | 317 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 158, 185 |
Conread position: | 2-325 |
Cow position: | chr19:28594426-28594750 (view UCSC Genome Browser custom track) |
Alignm length: | 328 |
Alignm identity: | 240 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 208, 182 |
Conread position: | 8-383 |
Cow position: | chr19:28405826-28405432 (view UCSC Genome Browser custom track) |
Alignm length: | 396 |
Alignm identity: | 300 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 206, 176 |
Conread position: | 13-383 |
Cow position: | chr19:7489231-7489621 (view UCSC Genome Browser custom track) |
Alignm length: | 392 |
Alignm identity: | 291 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 204, 171 |
Conread position: | 19-383 |
Cow position: | chr19:167680-167289 (view UCSC Genome Browser custom track) |
Alignm length: | 394 |
Alignm identity: | 263 |
Alignm E-value: | 4e-31 |
Alignm gaps (pig, cow): | 20, 8 |
Conread position: | 29-383 |
Cow position: | chr19:11522263-11521898 (view UCSC Genome Browser custom track) |
Alignm length: | 368 |
Alignm identity: | 260 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 59, 51 |
Conread position: | 31-265 |
Cow position: | chr19:173137-173375 (view UCSC Genome Browser custom track) |
Alignm length: | 242 |
Alignm identity: | 179 |
Alignm E-value: | 3e-38 |
Alignm gaps (pig, cow): | 113, 159 |
Conread position: | 34-383 |
Cow position: | chr19:40851542-40851180 (view UCSC Genome Browser custom track) |
Alignm length: | 365 |
Alignm identity: | 266 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 185, 149 |
Conread position: | 38-302 |
Cow position: | chr19:204892-205159 (view UCSC Genome Browser custom track) |
Alignm length: | 270 |
Alignm identity: | 196 |
Alignm E-value: | 1.00053e-42 |
Alignm gaps (pig, cow): | 26, 34 |
Conread position: | 49-350 |
Cow position: | chr19:20105647-20105947 (view UCSC Genome Browser custom track) |
Alignm length: | 305 |
Alignm identity: | 215 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 168, 135 |
Conread position: | 50-237 |
Cow position: | chr19:39667817-39667638 (view UCSC Genome Browser custom track) |
Alignm length: | 190 |
Alignm identity: | 145 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 53, 40 |
Conread position: | 57-383 |
Cow position: | chr19:5729803-5730140 (view UCSC Genome Browser custom track) |
Alignm length: | 341 |
Alignm identity: | 247 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 194, 127 |
Conread position: | 82-241 |
Cow position: | chr19:1490071-1489915 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 117 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 132, 99 |
Conread position: | 82-305 |
Cow position: | chr19:35379545-35379761 (view UCSC Genome Browser custom track) |
Alignm length: | 225 |
Alignm identity: | 169 |
Alignm E-value: | 9e-38 |
Alignm gaps (pig, cow): | 135, 101 |
Conread position: | 82-324 |
Cow position: | chr19:39096109-39096346 (view UCSC Genome Browser custom track) |
Alignm length: | 251 |
Alignm identity: | 175 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 137, 12 |
Conread position: | 127-383 |
Cow position: | chr19:892624-892356 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 199 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 88, 57 |
Conread position: | 145-326 |
Cow position: | chr19:30756230-30756418 (view UCSC Genome Browser custom track) |
Alignm length: | 192 |
Alignm identity: | 141 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 53, 39 |
Conread position: | 163-383 |
Cow position: | chr19:6713673-6713459 (view UCSC Genome Browser custom track) |
Alignm length: | 227 |
Alignm identity: | 161 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 50, 20 |
Conread position: | 196-383 |
Cow position: | chr19:40816450-40816243 (view UCSC Genome Browser custom track) |
Alignm length: | 208 |
Alignm identity: | 153 |
Alignm E-value: | 6e-24 |
Alignm gaps (pig, cow): | 21, 0 |
Show alignments to all cow chromosomes.