Cow genome map
Conread name: | Spl1-SPL01C050096 |
Conread position: | 1-283 |
Cow position: | chr2:80292636-80292362 (view UCSC Genome Browser custom track) |
Alignm length: | 285 |
Alignm identity: | 211 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 216, 13 |
Conread position: | 1-292 |
Cow position: | chr2:49472563-49472857 (view UCSC Genome Browser custom track) |
Alignm length: | 295 |
Alignm identity: | 206 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 82, 0 |
Conread position: | 1-321 |
Cow position: | chr2:14777526-14777223 (view UCSC Genome Browser custom track) |
Alignm length: | 323 |
Alignm identity: | 233 |
Alignm E-value: | 7.00649e-43 |
Alignm gaps (pig, cow): | 122, 118 |
Conread position: | 1-325 |
Cow position: | chr2:36052692-36052375 (view UCSC Genome Browser custom track) |
Alignm length: | 326 |
Alignm identity: | 249 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 218, 65 |
Conread position: | 1-325 |
Cow position: | chr2:39421938-39422262 (view UCSC Genome Browser custom track) |
Alignm length: | 327 |
Alignm identity: | 236 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 216, 183 |
Conread position: | 1-331 |
Cow position: | chr2:2356125-2355794 (view UCSC Genome Browser custom track) |
Alignm length: | 334 |
Alignm identity: | 241 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 216, 185 |
Conread position: | 1-331 |
Cow position: | chr2:3324244-3323915 (view UCSC Genome Browser custom track) |
Alignm length: | 334 |
Alignm identity: | 231 |
Alignm E-value: | 8.40779e-45 |
Alignm gaps (pig, cow): | 224, 91 |
Conread position: | 1-338 |
Cow position: | chr2:14823418-14823738 (view UCSC Genome Browser custom track) |
Alignm length: | 341 |
Alignm identity: | 260 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 213, 54 |
Conread position: | 1-338 |
Cow position: | chr2:38012970-38013306 (view UCSC Genome Browser custom track) |
Alignm length: | 339 |
Alignm identity: | 206 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 217, 16 |
Conread position: | 1-338 |
Cow position: | chr2:43961013-43961349 (view UCSC Genome Browser custom track) |
Alignm length: | 343 |
Alignm identity: | 238 |
Alignm E-value: | 2.8026e-45 |
Alignm gaps (pig, cow): | 219, 47 |
Conread position: | 1-339 |
Cow position: | chr2:7903356-7903688 (view UCSC Genome Browser custom track) |
Alignm length: | 342 |
Alignm identity: | 258 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 242, 88 |
Conread position: | 1-339 |
Cow position: | chr2:41172983-41173322 (view UCSC Genome Browser custom track) |
Alignm length: | 343 |
Alignm identity: | 261 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 77 |
Conread position: | 1-340 |
Cow position: | chr2:27317631-27317960 (view UCSC Genome Browser custom track) |
Alignm length: | 341 |
Alignm identity: | 243 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 107, 32 |
Conread position: | 1-351 |
Cow position: | chr2:53554280-53554621 (view UCSC Genome Browser custom track) |
Alignm length: | 353 |
Alignm identity: | 255 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 246, 98 |
Conread position: | 1-356 |
Cow position: | chr2:3834646-3834293 (view UCSC Genome Browser custom track) |
Alignm length: | 365 |
Alignm identity: | 258 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 105 |
Conread position: | 1-364 |
Cow position: | chr2:32655985-32656344 (view UCSC Genome Browser custom track) |
Alignm length: | 376 |
Alignm identity: | 273 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 213, 116 |
Conread position: | 1-375 |
Cow position: | chr2:364743-364365 (view UCSC Genome Browser custom track) |
Alignm length: | 380 |
Alignm identity: | 270 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 215, 313 |
Conread position: | 1-379 |
Cow position: | chr2:4402842-4402451 (view UCSC Genome Browser custom track) |
Alignm length: | 394 |
Alignm identity: | 278 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 209, 183 |
Conread position: | 1-379 |
Cow position: | chr2:41657491-41657883 (view UCSC Genome Browser custom track) |
Alignm length: | 397 |
Alignm identity: | 278 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 216, 190 |
Conread position: | 1-382 |
Cow position: | chr2:6961832-6962227 (view UCSC Genome Browser custom track) |
Alignm length: | 398 |
Alignm identity: | 285 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 216, 183 |
Conread position: | 1-383 |
Cow position: | chr2:211944-211547 (view UCSC Genome Browser custom track) |
Alignm length: | 400 |
Alignm identity: | 277 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 105, 182 |
Conread position: | 1-383 |
Cow position: | chr2:282374-281980 (view UCSC Genome Browser custom track) |
Alignm length: | 396 |
Alignm identity: | 293 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 216, 183 |
Conread position: | 1-383 |
Cow position: | chr2:1691292-1691680 (view UCSC Genome Browser custom track) |
Alignm length: | 392 |
Alignm identity: | 299 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 211, 93 |
Conread position: | 1-383 |
Cow position: | chr2:5484675-5484297 (view UCSC Genome Browser custom track) |
Alignm length: | 389 |
Alignm identity: | 305 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 218, 79 |
Conread position: | 1-383 |
Cow position: | chr2:5870070-5869670 (view UCSC Genome Browser custom track) |
Alignm length: | 403 |
Alignm identity: | 291 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 210, 47 |
Conread position: | 1-383 |
Cow position: | chr2:8118857-8119255 (view UCSC Genome Browser custom track) |
Alignm length: | 400 |
Alignm identity: | 305 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 216, 182 |
Conread position: | 1-383 |
Cow position: | chr2:9958756-9958356 (view UCSC Genome Browser custom track) |
Alignm length: | 401 |
Alignm identity: | 280 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 186, 0 |
Conread position: | 1-383 |
Cow position: | chr2:10268342-10267953 (view UCSC Genome Browser custom track) |
Alignm length: | 397 |
Alignm identity: | 292 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 250, 183 |
Conread position: | 1-383 |
Cow position: | chr2:11158803-11158411 (view UCSC Genome Browser custom track) |
Alignm length: | 396 |
Alignm identity: | 287 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 298, 183 |
Conread position: | 1-383 |
Cow position: | chr2:12479755-12479359 (view UCSC Genome Browser custom track) |
Alignm length: | 405 |
Alignm identity: | 285 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 220, 99 |
Conread position: | 1-383 |
Cow position: | chr2:13045389-13045002 (view UCSC Genome Browser custom track) |
Alignm length: | 398 |
Alignm identity: | 286 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 216, 51 |
Conread position: | 1-383 |
Cow position: | chr2:16075185-16074821 (view UCSC Genome Browser custom track) |
Alignm length: | 387 |
Alignm identity: | 275 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 157, 42 |
Conread position: | 1-383 |
Cow position: | chr2:16900568-16900970 (view UCSC Genome Browser custom track) |
Alignm length: | 404 |
Alignm identity: | 304 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 216, 183 |
Conread position: | 1-383 |
Cow position: | chr2:19011661-19012065 (view UCSC Genome Browser custom track) |
Alignm length: | 405 |
Alignm identity: | 294 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 213, 0 |
Conread position: | 1-383 |
Cow position: | chr2:24147181-24147574 (view UCSC Genome Browser custom track) |
Alignm length: | 397 |
Alignm identity: | 291 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 216, 164 |
Conread position: | 1-383 |
Cow position: | chr2:24924878-24925276 (view UCSC Genome Browser custom track) |
Alignm length: | 400 |
Alignm identity: | 292 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 204, 182 |
Conread position: | 1-383 |
Cow position: | chr2:25028967-25028581 (view UCSC Genome Browser custom track) |
Alignm length: | 389 |
Alignm identity: | 259 |
Alignm E-value: | 8.40779e-45 |
Alignm gaps (pig, cow): | 216, 182 |
Conread position: | 1-383 |
Cow position: | chr2:28649282-28648891 (view UCSC Genome Browser custom track) |
Alignm length: | 394 |
Alignm identity: | 286 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 216, 31 |
Conread position: | 1-383 |
Cow position: | chr2:28793563-28793958 (view UCSC Genome Browser custom track) |
Alignm length: | 397 |
Alignm identity: | 291 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 153, 186 |
Conread position: | 1-383 |
Cow position: | chr2:34051483-34051868 (view UCSC Genome Browser custom track) |
Alignm length: | 395 |
Alignm identity: | 270 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 325, 183 |
Conread position: | 1-383 |
Cow position: | chr2:42332551-42332178 (view UCSC Genome Browser custom track) |
Alignm length: | 397 |
Alignm identity: | 280 |
Alignm E-value: | 6.99949e-42 |
Alignm gaps (pig, cow): | 99, 20 |
Conread position: | 1-383 |
Cow position: | chr2:42670390-42669994 (view UCSC Genome Browser custom track) |
Alignm length: | 399 |
Alignm identity: | 296 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 63, 71 |
Conread position: | 1-383 |
Cow position: | chr2:44934637-44934269 (view UCSC Genome Browser custom track) |
Alignm length: | 391 |
Alignm identity: | 263 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 215, 29 |
Conread position: | 1-383 |
Cow position: | chr2:47811161-47811559 (view UCSC Genome Browser custom track) |
Alignm length: | 403 |
Alignm identity: | 292 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 213, 129 |
Conread position: | 1-383 |
Cow position: | chr2:49605257-49605652 (view UCSC Genome Browser custom track) |
Alignm length: | 398 |
Alignm identity: | 290 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 186 |
Conread position: | 1-383 |
Cow position: | chr2:51617564-51617964 (view UCSC Genome Browser custom track) |
Alignm length: | 402 |
Alignm identity: | 303 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 244, 183 |
Conread position: | 1-383 |
Cow position: | chr2:52616787-52617186 (view UCSC Genome Browser custom track) |
Alignm length: | 401 |
Alignm identity: | 281 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 216, 183 |
Conread position: | 1-383 |
Cow position: | chr2:53330073-53330473 (view UCSC Genome Browser custom track) |
Alignm length: | 402 |
Alignm identity: | 298 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 31, 186 |
Conread position: | 1-383 |
Cow position: | chr2:59413369-59412982 (view UCSC Genome Browser custom track) |
Alignm length: | 394 |
Alignm identity: | 278 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 209, 173 |
Conread position: | 1-383 |
Cow position: | chr2:81257489-81257879 (view UCSC Genome Browser custom track) |
Alignm length: | 395 |
Alignm identity: | 294 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 151, 79 |
Conread position: | 1-394 |
Cow position: | chr2:36980696-36981104 (view UCSC Genome Browser custom track) |
Alignm length: | 413 |
Alignm identity: | 308 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 71, 64 |
Conread position: | 1-394 |
Cow position: | chr2:67420634-67420224 (view UCSC Genome Browser custom track) |
Alignm length: | 413 |
Alignm identity: | 280 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 216, 185 |
Conread position: | 1-439 |
Cow position: | chr2:13482351-13481893 (view UCSC Genome Browser custom track) |
Alignm length: | 470 |
Alignm identity: | 318 |
Alignm E-value: | 5.99994e-41 |
Alignm gaps (pig, cow): | 13, 112 |
Conread position: | 1-439 |
Cow position: | chr2:50077916-50078362 (view UCSC Genome Browser custom track) |
Alignm length: | 450 |
Alignm identity: | 322 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 216, 70 |
Conread position: | 2-243 |
Cow position: | chr2:65938134-65937895 (view UCSC Genome Browser custom track) |
Alignm length: | 243 |
Alignm identity: | 185 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 212, 21 |
Conread position: | 2-330 |
Cow position: | chr2:2412480-2412152 (view UCSC Genome Browser custom track) |
Alignm length: | 334 |
Alignm identity: | 241 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 213, 181 |
Conread position: | 2-383 |
Cow position: | chr2:44990980-44990591 (view UCSC Genome Browser custom track) |
Alignm length: | 399 |
Alignm identity: | 288 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 216, 83 |
Conread position: | 2-383 |
Cow position: | chr2:47038105-47037723 (view UCSC Genome Browser custom track) |
Alignm length: | 388 |
Alignm identity: | 275 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 208, 181 |
Conread position: | 2-383 |
Cow position: | chr2:78742899-78743294 (view UCSC Genome Browser custom track) |
Alignm length: | 401 |
Alignm identity: | 295 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 38, 78 |
Conread position: | 3-294 |
Cow position: | chr2:45964799-45964507 (view UCSC Genome Browser custom track) |
Alignm length: | 295 |
Alignm identity: | 223 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 63, 70 |
Conread position: | 6-299 |
Cow position: | chr2:38373705-38373996 (view UCSC Genome Browser custom track) |
Alignm length: | 297 |
Alignm identity: | 211 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 122, 113 |
Conread position: | 7-380 |
Cow position: | chr2:4927080-4926710 (view UCSC Genome Browser custom track) |
Alignm length: | 389 |
Alignm identity: | 254 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 213, 12 |
Conread position: | 7-383 |
Cow position: | chr2:10185903-10185517 (view UCSC Genome Browser custom track) |
Alignm length: | 389 |
Alignm identity: | 288 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 210, 132 |
Conread position: | 7-383 |
Cow position: | chr2:31298111-31298502 (view UCSC Genome Browser custom track) |
Alignm length: | 399 |
Alignm identity: | 284 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 210, 10 |
Conread position: | 10-310 |
Cow position: | chr2:53662034-53662337 (view UCSC Genome Browser custom track) |
Alignm length: | 307 |
Alignm identity: | 225 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 207, 72 |
Conread position: | 10-375 |
Cow position: | chr2:9908238-9908617 (view UCSC Genome Browser custom track) |
Alignm length: | 382 |
Alignm identity: | 269 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 111, 46 |
Conread position: | 13-383 |
Cow position: | chr2:33088449-33088828 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 245 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 8, 18 |
Conread position: | 14-295 |
Cow position: | chr2:20919819-20919535 (view UCSC Genome Browser custom track) |
Alignm length: | 286 |
Alignm identity: | 200 |
Alignm E-value: | 5e-40 |
Alignm gaps (pig, cow): | 194, 178 |
Conread position: | 23-386 |
Cow position: | chr2:47602930-47602551 (view UCSC Genome Browser custom track) |
Alignm length: | 381 |
Alignm identity: | 278 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 193, 161 |
Conread position: | 25-383 |
Cow position: | chr2:10611301-10610935 (view UCSC Genome Browser custom track) |
Alignm length: | 370 |
Alignm identity: | 261 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 185, 158 |
Conread position: | 31-394 |
Cow position: | chr2:63291621-63291246 (view UCSC Genome Browser custom track) |
Alignm length: | 380 |
Alignm identity: | 260 |
Alignm E-value: | 5.99994e-41 |
Alignm gaps (pig, cow): | 186, 61 |
Conread position: | 34-439 |
Cow position: | chr2:73193457-73193859 (view UCSC Genome Browser custom track) |
Alignm length: | 413 |
Alignm identity: | 276 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 65, 150 |
Conread position: | 39-331 |
Cow position: | chr2:51989580-51989288 (view UCSC Genome Browser custom track) |
Alignm length: | 296 |
Alignm identity: | 207 |
Alignm E-value: | 5.99994e-41 |
Alignm gaps (pig, cow): | 178, 53 |
Conread position: | 49-383 |
Cow position: | chr2:55483776-55483440 (view UCSC Genome Browser custom track) |
Alignm length: | 344 |
Alignm identity: | 235 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 170, 55 |
Conread position: | 60-338 |
Cow position: | chr2:49627983-49628259 (view UCSC Genome Browser custom track) |
Alignm length: | 280 |
Alignm identity: | 203 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 79, 32 |
Conread position: | 63-338 |
Cow position: | chr2:77391168-77391440 (view UCSC Genome Browser custom track) |
Alignm length: | 278 |
Alignm identity: | 180 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 22, 16 |
Conread position: | 71-265 |
Cow position: | chr2:37789537-37789347 (view UCSC Genome Browser custom track) |
Alignm length: | 195 |
Alignm identity: | 139 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 113, 0 |
Conread position: | 72-373 |
Cow position: | chr2:40453303-40453607 (view UCSC Genome Browser custom track) |
Alignm length: | 311 |
Alignm identity: | 214 |
Alignm E-value: | 3e-35 |
Alignm gaps (pig, cow): | 145, 27 |
Conread position: | 82-383 |
Cow position: | chr2:28619559-28619244 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 220 |
Alignm E-value: | 5e-39 |
Alignm gaps (pig, cow): | 169, 101 |
Conread position: | 97-383 |
Cow position: | chr2:2381492-2381794 (view UCSC Genome Browser custom track) |
Alignm length: | 306 |
Alignm identity: | 212 |
Alignm E-value: | 6e-30 |
Alignm gaps (pig, cow): | 85, 278 |
Conread position: | 99-383 |
Cow position: | chr2:175151-174848 (view UCSC Genome Browser custom track) |
Alignm length: | 305 |
Alignm identity: | 217 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 8, 168 |
Conread position: | 103-383 |
Cow position: | chr2:574010-574304 (view UCSC Genome Browser custom track) |
Alignm length: | 296 |
Alignm identity: | 200 |
Alignm E-value: | 5e-28 |
Alignm gaps (pig, cow): | 111, 80 |
Conread position: | 122-304 |
Cow position: | chr2:767067-766873 (view UCSC Genome Browser custom track) |
Alignm length: | 195 |
Alignm identity: | 143 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 92, 0 |
Conread position: | 172-383 |
Cow position: | chr2:25888057-25887836 (view UCSC Genome Browser custom track) |
Alignm length: | 224 |
Alignm identity: | 162 |
Alignm E-value: | 5e-28 |
Alignm gaps (pig, cow): | 15, 102 |
Conread position: | 463-583 |
Cow position: | chr2:42292722-42292850 (view UCSC Genome Browser custom track) |
Alignm length: | 129 |
Alignm identity: | 102 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 75, 0 |
Show alignments to all cow chromosomes.