Cow genome map


           Conread name:
           Spl1-SPL01C050096
        

               Conread position:
               1-283
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               216, 13
               

               Conread position:
               1-292
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               206
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               1-321
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               233
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               122, 118
               

               Conread position:
               1-325
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               218, 65
               

               Conread position:
               1-325
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               216, 183
               

               Conread position:
               1-331
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               216, 185
               

               Conread position:
               1-331
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               231
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               224, 91
               

               Conread position:
               1-338
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               213, 54
               

               Conread position:
               1-338
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               206
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               217, 16
               

               Conread position:
               1-338
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               238
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               219, 47
               

               Conread position:
               1-339
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               242, 88
               

               Conread position:
               1-339
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 77
               

               Conread position:
               1-340
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 32
               

               Conread position:
               1-351
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               246, 98
               

               Conread position:
               1-356
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 105
               

               Conread position:
               1-364
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               213, 116
               

               Conread position:
               1-375
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               215, 313
               

               Conread position:
               1-379
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               209, 183
               

               Conread position:
               1-379
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               216, 190
               

               Conread position:
               1-382
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               216, 183
               

               Conread position:
               1-383
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 182
               

               Conread position:
               1-383
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               216, 183
               

               Conread position:
               1-383
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               211, 93
               

               Conread position:
               1-383
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               218, 79
               

               Conread position:
               1-383
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               210, 47
               

               Conread position:
               1-383
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               216, 182
               

               Conread position:
               1-383
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               186, 0
               

               Conread position:
               1-383
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               250, 183
               

               Conread position:
               1-383
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               298, 183
               

               Conread position:
               1-383
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               220, 99
               

               Conread position:
               1-383
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               216, 51
               

               Conread position:
               1-383
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 42
               

               Conread position:
               1-383
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               216, 183
               

               Conread position:
               1-383
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               213, 0
               

               Conread position:
               1-383
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               216, 164
               

               Conread position:
               1-383
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               204, 182
               

               Conread position:
               1-383
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               259
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               216, 182
               

               Conread position:
               1-383
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               216, 31
               

               Conread position:
               1-383
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 186
               

               Conread position:
               1-383
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               325, 183
               

               Conread position:
               1-383
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               280
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               99, 20
               

               Conread position:
               1-383
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 71
               

               Conread position:
               1-383
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               263
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               215, 29
               

               Conread position:
               1-383
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               213, 129
               

               Conread position:
               1-383
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 186
               

               Conread position:
               1-383
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               244, 183
               

               Conread position:
               1-383
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               216, 183
               

               Conread position:
               1-383
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 186
               

               Conread position:
               1-383
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               209, 173
               

               Conread position:
               1-383
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 79
               

               Conread position:
               1-394
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 64
               

               Conread position:
               1-394
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               216, 185
               

               Conread position:
               1-439
               

               Cow position:
               
               

               Alignm length:
               470
               

               Alignm identity:
               318
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               13, 112
               

               Conread position:
               1-439
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               216, 70
               

               Conread position:
               2-243
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               185
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               212, 21
               

               Conread position:
               2-330
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               213, 181
               

               Conread position:
               2-383
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               216, 83
               

               Conread position:
               2-383
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               208, 181
               

               Conread position:
               2-383
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 78
               

               Conread position:
               3-294
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 70
               

               Conread position:
               6-299
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               211
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               122, 113
               

               Conread position:
               7-380
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               254
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               213, 12
               

               Conread position:
               7-383
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               210, 132
               

               Conread position:
               7-383
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               210, 10
               

               Conread position:
               10-310
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               207, 72
               

               Conread position:
               10-375
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 46
               

               Conread position:
               13-383
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               245
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               8, 18
               

               Conread position:
               14-295
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               200
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               194, 178
               

               Conread position:
               23-386
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               193, 161
               

               Conread position:
               25-383
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               185, 158
               

               Conread position:
               31-394
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               260
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               186, 61
               

               Conread position:
               34-439
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               276
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               65, 150
               

               Conread position:
               39-331
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               207
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               178, 53
               

               Conread position:
               49-383
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               235
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               170, 55
               

               Conread position:
               60-338
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 32
               

               Conread position:
               63-338
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               180
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               22, 16
               

               Conread position:
               71-265
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               113, 0
               

               Conread position:
               72-373
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               214
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               145, 27
               

               Conread position:
               82-383
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               220
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               169, 101
               

               Conread position:
               97-383
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               212
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               85, 278
               

               Conread position:
               99-383
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               217
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               8, 168
               

               Conread position:
               103-383
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               200
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               111, 80
               

               Conread position:
               122-304
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               172-383
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               162
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               15, 102
               

               Conread position:
               463-583
               

               Cow position:
               
               

               Alignm length:
               129
               

               Alignm identity:
               102
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               75, 0
               
Show alignments to all cow chromosomes.