Cow genome map
| Conread name: | Spl1-SPL01C050096 |
| Conread position: | 1-295 |
| Cow position: | chr20:16105706-16105410 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 209, 182 |
| Conread position: | 1-325 |
| Cow position: | chr20:8973985-8973659 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 208, 227 |
| Conread position: | 1-331 |
| Cow position: | chr20:823593-823936 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 244 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 208, 112 |
| Conread position: | 1-365 |
| Cow position: | chr20:15097042-15096672 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 213, 44 |
| Conread position: | 1-368 |
| Cow position: | chr20:19355597-19355965 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 187 |
| Conread position: | 1-379 |
| Cow position: | chr20:10101869-10101474 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 215, 89 |
| Conread position: | 1-379 |
| Cow position: | chr20:28161653-28162041 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 216, 183 |
| Conread position: | 1-380 |
| Cow position: | chr20:24616034-24615656 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 218, 38 |
| Conread position: | 1-382 |
| Cow position: | chr20:14870114-14869729 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 215, 65 |
| Conread position: | 1-383 |
| Cow position: | chr20:5535768-5536166 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 216, 183 |
| Conread position: | 1-383 |
| Cow position: | chr20:12437873-12437484 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 216, 99 |
| Conread position: | 1-383 |
| Cow position: | chr20:13763741-13764131 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 216, 81 |
| Conread position: | 1-383 |
| Cow position: | chr20:15066318-15066698 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 208, 58 |
| Conread position: | 1-383 |
| Cow position: | chr20:15292836-15293219 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 217, 183 |
| Conread position: | 1-383 |
| Cow position: | chr20:18314513-18314117 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 17 |
| Conread position: | 1-383 |
| Cow position: | chr20:19438749-19439144 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 209, 182 |
| Conread position: | 1-383 |
| Cow position: | chr20:23468829-23468433 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 218, 183 |
| Conread position: | 1-383 |
| Cow position: | chr20:23799717-23800114 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 217, 183 |
| Conread position: | 1-383 |
| Cow position: | chr20:25849994-25849592 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 179 |
| Conread position: | 1-383 |
| Cow position: | chr20:29949337-29949747 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 213, 183 |
| Conread position: | 1-386 |
| Cow position: | chr20:12569354-12569754 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 213, 183 |
| Conread position: | 1-394 |
| Cow position: | chr20:8216350-8216756 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 216, 28 |
| Conread position: | 1-394 |
| Cow position: | chr20:27870037-27870447 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 213, 183 |
| Conread position: | 1-394 |
| Cow position: | chr20:32349104-32349511 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 271 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 94, 64 |
| Conread position: | 2-377 |
| Cow position: | chr20:35125330-35125717 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 215, 90 |
| Conread position: | 7-366 |
| Cow position: | chr20:13433760-13433401 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 210, 150 |
| Conread position: | 7-380 |
| Cow position: | chr20:21394767-21395155 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 47 |
| Conread position: | 9-383 |
| Cow position: | chr20:13679202-13678817 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 281 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 171, 46 |
| Conread position: | 145-383 |
| Cow position: | chr20:30686547-30686802 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 72, 39 |
| Conread position: | 162-383 |
| Cow position: | chr20:13664051-13663825 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 171 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 55, 21 |
| Conread position: | 177-383 |
| Cow position: | chr20:9343977-9344197 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 169 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 10, 19 |
| Conread position: | 186-382 |
| Cow position: | chr20:16178749-16178539 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 62, 0 |
Show alignments to all cow chromosomes.