Cow genome map


           Conread name:
           Spl1-SPL01C050096
        

               Conread position:
               1-248
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               171
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               215, 69
               

               Conread position:
               1-328
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               210, 182
               

               Conread position:
               1-330
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               215, 183
               

               Conread position:
               1-331
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               216, 183
               

               Conread position:
               1-338
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               227
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               58, 158
               

               Conread position:
               1-365
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               209, 337
               

               Conread position:
               1-371
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 184
               

               Conread position:
               1-372
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               217, 29
               

               Conread position:
               1-377
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               216, 106
               

               Conread position:
               1-377
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               213, 66
               

               Conread position:
               1-379
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               216, 168
               

               Conread position:
               1-383
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               218, 49
               

               Conread position:
               1-383
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               216, 98
               

               Conread position:
               1-383
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               216, 183
               

               Conread position:
               1-383
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 71
               

               Conread position:
               1-383
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               244, 86
               

               Conread position:
               1-383
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               218, 20
               

               Conread position:
               1-383
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               272
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               220, 86
               

               Conread position:
               1-383
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               216, 51
               

               Conread position:
               1-383
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 42
               

               Conread position:
               1-383
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               126, 133
               

               Conread position:
               1-383
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               216, 104
               

               Conread position:
               1-383
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               209, 183
               

               Conread position:
               1-383
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               213, 191
               

               Conread position:
               1-383
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               216, 161
               

               Conread position:
               1-383
               

               Cow position:
               
               

               Alignm length:
               412
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 71
               

               Conread position:
               1-383
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               277
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               29, 34
               

               Conread position:
               1-383
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               216, 20
               

               Conread position:
               1-394
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 184
               

               Conread position:
               1-394
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               218, 21
               

               Conread position:
               1-429
               

               Cow position:
               
               

               Alignm length:
               449
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               216, 161
               

               Conread position:
               4-356
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               215, 178
               

               Conread position:
               7-338
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               238
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               187, 13
               

               Conread position:
               7-383
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               209, 40
               

               Conread position:
               37-383
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               208, 145
               

               Conread position:
               38-383
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               178, 144
               

               Conread position:
               71-322
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               176
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               149, 109
               

               Conread position:
               82-289
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               148
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               161, 101
               

               Conread position:
               107-292
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               112, 51
               

               Conread position:
               148-345
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               70, 20
               

               Conread position:
               178-387
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               216-383
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               29, 64
               
Show alignments to all cow chromosomes.