Cow genome map
Conread name: | Spl1-SPL01C050096 |
Conread position: | 1-248 |
Cow position: | chr23:28218067-28218307 (view UCSC Genome Browser custom track) |
Alignm length: | 249 |
Alignm identity: | 171 |
Alignm E-value: | 7e-29 |
Alignm gaps (pig, cow): | 215, 69 |
Conread position: | 1-328 |
Cow position: | chr23:2341852-2342182 (view UCSC Genome Browser custom track) |
Alignm length: | 333 |
Alignm identity: | 232 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 210, 182 |
Conread position: | 1-330 |
Cow position: | chr23:2312466-2312137 (view UCSC Genome Browser custom track) |
Alignm length: | 332 |
Alignm identity: | 232 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 215, 183 |
Conread position: | 1-331 |
Cow position: | chr23:23171275-23171606 (view UCSC Genome Browser custom track) |
Alignm length: | 334 |
Alignm identity: | 234 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 216, 183 |
Conread position: | 1-338 |
Cow position: | chr23:15876786-15876457 (view UCSC Genome Browser custom track) |
Alignm length: | 342 |
Alignm identity: | 227 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 58, 158 |
Conread position: | 1-365 |
Cow position: | chr23:3706896-3707262 (view UCSC Genome Browser custom track) |
Alignm length: | 368 |
Alignm identity: | 247 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 209, 337 |
Conread position: | 1-371 |
Cow position: | chr23:15219128-15218761 (view UCSC Genome Browser custom track) |
Alignm length: | 375 |
Alignm identity: | 277 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 184 |
Conread position: | 1-372 |
Cow position: | chr23:11779563-11779944 (view UCSC Genome Browser custom track) |
Alignm length: | 387 |
Alignm identity: | 286 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 217, 29 |
Conread position: | 1-377 |
Cow position: | chr23:2576201-2576577 (view UCSC Genome Browser custom track) |
Alignm length: | 382 |
Alignm identity: | 270 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 216, 106 |
Conread position: | 1-377 |
Cow position: | chr23:16614660-16614273 (view UCSC Genome Browser custom track) |
Alignm length: | 391 |
Alignm identity: | 286 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 213, 66 |
Conread position: | 1-379 |
Cow position: | chr23:29451565-29451186 (view UCSC Genome Browser custom track) |
Alignm length: | 392 |
Alignm identity: | 296 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 216, 168 |
Conread position: | 1-383 |
Cow position: | chr23:1013012-1012631 (view UCSC Genome Browser custom track) |
Alignm length: | 390 |
Alignm identity: | 269 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 218, 49 |
Conread position: | 1-383 |
Cow position: | chr23:2026303-2025913 (view UCSC Genome Browser custom track) |
Alignm length: | 398 |
Alignm identity: | 305 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 216, 98 |
Conread position: | 1-383 |
Cow position: | chr23:2758663-2759060 (view UCSC Genome Browser custom track) |
Alignm length: | 399 |
Alignm identity: | 290 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 216, 183 |
Conread position: | 1-383 |
Cow position: | chr23:3880306-3879915 (view UCSC Genome Browser custom track) |
Alignm length: | 398 |
Alignm identity: | 289 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 63, 71 |
Conread position: | 1-383 |
Cow position: | chr23:4639846-4639457 (view UCSC Genome Browser custom track) |
Alignm length: | 394 |
Alignm identity: | 282 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 244, 86 |
Conread position: | 1-383 |
Cow position: | chr23:4889461-4889856 (view UCSC Genome Browser custom track) |
Alignm length: | 399 |
Alignm identity: | 287 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 218, 20 |
Conread position: | 1-383 |
Cow position: | chr23:6220028-6220423 (view UCSC Genome Browser custom track) |
Alignm length: | 404 |
Alignm identity: | 272 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 220, 86 |
Conread position: | 1-383 |
Cow position: | chr23:15041968-15041595 (view UCSC Genome Browser custom track) |
Alignm length: | 385 |
Alignm identity: | 269 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 216, 51 |
Conread position: | 1-383 |
Cow position: | chr23:15177849-15178244 (view UCSC Genome Browser custom track) |
Alignm length: | 401 |
Alignm identity: | 292 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 42 |
Conread position: | 1-383 |
Cow position: | chr23:15526344-15526737 (view UCSC Genome Browser custom track) |
Alignm length: | 396 |
Alignm identity: | 295 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 126, 133 |
Conread position: | 1-383 |
Cow position: | chr23:16498453-16498070 (view UCSC Genome Browser custom track) |
Alignm length: | 398 |
Alignm identity: | 293 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 216, 104 |
Conread position: | 1-383 |
Cow position: | chr23:19949824-19949421 (view UCSC Genome Browser custom track) |
Alignm length: | 405 |
Alignm identity: | 283 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 209, 183 |
Conread position: | 1-383 |
Cow position: | chr23:20155443-20155043 (view UCSC Genome Browser custom track) |
Alignm length: | 402 |
Alignm identity: | 282 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 213, 191 |
Conread position: | 1-383 |
Cow position: | chr23:25683160-25682785 (view UCSC Genome Browser custom track) |
Alignm length: | 387 |
Alignm identity: | 290 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 216, 161 |
Conread position: | 1-383 |
Cow position: | chr23:27400283-27400692 (view UCSC Genome Browser custom track) |
Alignm length: | 412 |
Alignm identity: | 299 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 63, 71 |
Conread position: | 1-383 |
Cow position: | chr23:28025445-28025828 (view UCSC Genome Browser custom track) |
Alignm length: | 398 |
Alignm identity: | 277 |
Alignm E-value: | 4.06377e-44 |
Alignm gaps (pig, cow): | 29, 34 |
Conread position: | 1-383 |
Cow position: | chr23:36030597-36030207 (view UCSC Genome Browser custom track) |
Alignm length: | 397 |
Alignm identity: | 293 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 216, 20 |
Conread position: | 1-394 |
Cow position: | chr23:965721-965314 (view UCSC Genome Browser custom track) |
Alignm length: | 411 |
Alignm identity: | 292 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 184 |
Conread position: | 1-394 |
Cow position: | chr23:19490316-19490727 (view UCSC Genome Browser custom track) |
Alignm length: | 418 |
Alignm identity: | 298 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 218, 21 |
Conread position: | 1-429 |
Cow position: | chr23:4817797-4818241 (view UCSC Genome Browser custom track) |
Alignm length: | 449 |
Alignm identity: | 319 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 216, 161 |
Conread position: | 4-356 |
Cow position: | chr23:5873800-5873447 (view UCSC Genome Browser custom track) |
Alignm length: | 356 |
Alignm identity: | 261 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 215, 178 |
Conread position: | 7-338 |
Cow position: | chr23:1401743-1401426 (view UCSC Genome Browser custom track) |
Alignm length: | 335 |
Alignm identity: | 238 |
Alignm E-value: | 1.00053e-42 |
Alignm gaps (pig, cow): | 187, 13 |
Conread position: | 7-383 |
Cow position: | chr23:38581520-38581884 (view UCSC Genome Browser custom track) |
Alignm length: | 384 |
Alignm identity: | 284 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 209, 40 |
Conread position: | 37-383 |
Cow position: | chr23:8286842-8287202 (view UCSC Genome Browser custom track) |
Alignm length: | 364 |
Alignm identity: | 277 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 208, 145 |
Conread position: | 38-383 |
Cow position: | chr23:1956715-1957055 (view UCSC Genome Browser custom track) |
Alignm length: | 350 |
Alignm identity: | 259 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 178, 144 |
Conread position: | 71-322 |
Cow position: | chr23:5739510-5739261 (view UCSC Genome Browser custom track) |
Alignm length: | 254 |
Alignm identity: | 176 |
Alignm E-value: | 4e-33 |
Alignm gaps (pig, cow): | 149, 109 |
Conread position: | 82-289 |
Cow position: | chr23:7045586-7045378 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 148 |
Alignm E-value: | 7e-29 |
Alignm gaps (pig, cow): | 161, 101 |
Conread position: | 107-292 |
Cow position: | chr23:2440973-2440789 (view UCSC Genome Browser custom track) |
Alignm length: | 187 |
Alignm identity: | 141 |
Alignm E-value: | 4e-33 |
Alignm gaps (pig, cow): | 112, 51 |
Conread position: | 148-345 |
Cow position: | chr23:31649118-31648920 (view UCSC Genome Browser custom track) |
Alignm length: | 203 |
Alignm identity: | 148 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 70, 20 |
Conread position: | 178-387 |
Cow position: | chr23:21243796-21243565 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 165 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 11, 0 |
Conread position: | 216-383 |
Cow position: | chr23:22167660-22167841 (view UCSC Genome Browser custom track) |
Alignm length: | 183 |
Alignm identity: | 136 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 29, 64 |
Show alignments to all cow chromosomes.