Cow genome map

Conread name: Spl1-SPL01C050096

Conread position: 1-248
Cow position: chr23:28218067-28218307 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 171
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 215, 69

Conread position: 1-328
Cow position: chr23:2341852-2342182 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 182

Conread position: 1-330
Cow position: chr23:2312466-2312137 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 183

Conread position: 1-331
Cow position: chr23:23171275-23171606 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 183

Conread position: 1-338
Cow position: chr23:15876786-15876457 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 227
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 58, 158

Conread position: 1-365
Cow position: chr23:3706896-3707262 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 337

Conread position: 1-371
Cow position: chr23:15219128-15218761 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 184

Conread position: 1-372
Cow position: chr23:11779563-11779944 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 29

Conread position: 1-377
Cow position: chr23:2576201-2576577 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 106

Conread position: 1-377
Cow position: chr23:16614660-16614273 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 66

Conread position: 1-379
Cow position: chr23:29451565-29451186 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 168

Conread position: 1-383
Cow position: chr23:1013012-1012631 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 49

Conread position: 1-383
Cow position: chr23:2026303-2025913 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 98

Conread position: 1-383
Cow position: chr23:2758663-2759060 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 183

Conread position: 1-383
Cow position: chr23:3880306-3879915 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 71

Conread position: 1-383
Cow position: chr23:4639846-4639457 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 244, 86

Conread position: 1-383
Cow position: chr23:4889461-4889856 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 20

Conread position: 1-383
Cow position: chr23:6220028-6220423 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 272
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 220, 86

Conread position: 1-383
Cow position: chr23:15041968-15041595 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 51

Conread position: 1-383
Cow position: chr23:15177849-15178244 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 42

Conread position: 1-383
Cow position: chr23:15526344-15526737 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 133

Conread position: 1-383
Cow position: chr23:16498453-16498070 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 104

Conread position: 1-383
Cow position: chr23:19949824-19949421 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 183

Conread position: 1-383
Cow position: chr23:20155443-20155043 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 191

Conread position: 1-383
Cow position: chr23:25683160-25682785 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 161

Conread position: 1-383
Cow position: chr23:27400283-27400692 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 71

Conread position: 1-383
Cow position: chr23:28025445-28025828 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 277
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 29, 34

Conread position: 1-383
Cow position: chr23:36030597-36030207 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 20

Conread position: 1-394
Cow position: chr23:965721-965314 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 184

Conread position: 1-394
Cow position: chr23:19490316-19490727 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 21

Conread position: 1-429
Cow position: chr23:4817797-4818241 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 161

Conread position: 4-356
Cow position: chr23:5873800-5873447 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 178

Conread position: 7-338
Cow position: chr23:1401743-1401426 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 238
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 187, 13

Conread position: 7-383
Cow position: chr23:38581520-38581884 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 40

Conread position: 37-383
Cow position: chr23:8286842-8287202 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 145

Conread position: 38-383
Cow position: chr23:1956715-1957055 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 144

Conread position: 71-322
Cow position: chr23:5739510-5739261 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 176
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 149, 109

Conread position: 82-289
Cow position: chr23:7045586-7045378 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 148
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 161, 101

Conread position: 107-292
Cow position: chr23:2440973-2440789 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 141
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 112, 51

Conread position: 148-345
Cow position: chr23:31649118-31648920 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 148
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 70, 20

Conread position: 178-387
Cow position: chr23:21243796-21243565 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 165
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 11, 0

Conread position: 216-383
Cow position: chr23:22167660-22167841 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 136
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 29, 64

Show alignments to all cow chromosomes.