Cow genome map


           Conread name:
           Spl1-SPL01C050096
        

               Conread position:
               1-212
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-237
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               190
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               211, 183
               

               Conread position:
               1-302
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               211, 182
               

               Conread position:
               1-320
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               242
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               55, 13
               

               Conread position:
               1-331
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               216, 183
               

               Conread position:
               1-331
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               232
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               187, 316
               

               Conread position:
               1-350
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               216, 183
               

               Conread position:
               1-375
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               189, 320
               

               Conread position:
               1-375
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               254
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               216, 129
               

               Conread position:
               1-379
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 46
               

               Conread position:
               1-380
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               216, 183
               

               Conread position:
               1-383
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 71
               

               Conread position:
               1-383
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               216, 183
               

               Conread position:
               1-383
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 63
               

               Conread position:
               1-383
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               152, 20
               

               Conread position:
               1-383
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               276
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               106, 135
               

               Conread position:
               1-383
               

               Cow position:
               
               

               Alignm length:
               408
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               134, 198
               

               Conread position:
               1-383
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               216, 185
               

               Conread position:
               1-383
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               184, 195
               

               Conread position:
               1-383
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               216, 92
               

               Conread position:
               1-383
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               193, 81
               

               Conread position:
               1-383
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 185
               

               Conread position:
               1-383
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               216, 183
               

               Conread position:
               1-383
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               224, 185
               

               Conread position:
               1-383
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               242, 79
               

               Conread position:
               1-383
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               215, 183
               

               Conread position:
               1-383
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               216, 183
               

               Conread position:
               1-393
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 184
               

               Conread position:
               1-394
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               217, 138
               

               Conread position:
               1-394
               

               Cow position:
               
               

               Alignm length:
               412
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               217, 183
               

               Conread position:
               1-394
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               131, 185
               

               Conread position:
               1-405
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               299
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               214, 18
               

               Conread position:
               1-439
               

               Cow position:
               
               

               Alignm length:
               469
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 93
               

               Conread position:
               3-380
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               213, 137
               

               Conread position:
               5-380
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               210, 178
               

               Conread position:
               6-304
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               202
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               241, 58
               

               Conread position:
               10-383
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               163, 34
               

               Conread position:
               34-299
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               185, 42
               

               Conread position:
               34-383
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               237
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               183, 24
               

               Conread position:
               36-394
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               259
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               180, 148
               

               Conread position:
               47-265
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               168
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               170, 84
               

               Conread position:
               55-383
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               255
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               162, 128
               

               Conread position:
               55-394
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               259
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               196, 48
               

               Conread position:
               63-394
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               243
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               154, 19
               

               Conread position:
               96-375
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               204
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               121, 90
               

               Conread position:
               98-394
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               222
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               9, 177
               

               Conread position:
               109-345
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               167
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               120, 10
               

               Conread position:
               135-383
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               76, 26
               

               Conread position:
               181-383
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               150
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               40, 99
               
Show alignments to all cow chromosomes.