Cow genome map

Conread name: Spl1-SPL01C050096

Conread position: 1-291
Cow position: chr4:19006047-19005752 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 182

Conread position: 1-294
Cow position: chr4:18517408-18517702 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 183

Conread position: 1-326
Cow position: chr4:18424016-18423690 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 183

Conread position: 1-331
Cow position: chr4:159667-160000 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 183

Conread position: 1-331
Cow position: chr4:1930122-1929803 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 238
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 209, 154

Conread position: 1-331
Cow position: chr4:17093357-17093027 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 182

Conread position: 1-365
Cow position: chr4:603524-603885 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 247
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 172, 254

Conread position: 1-372
Cow position: chr4:11110755-11110387 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 183

Conread position: 1-380
Cow position: chr4:1367656-1367269 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 266
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 89, 41

Conread position: 1-380
Cow position: chr4:67681701-67682093 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 183

Conread position: 1-381
Cow position: chr4:33596051-33596423 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 263
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 45, 54

Conread position: 1-383
Cow position: chr4:356419-356811 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 161

Conread position: 1-383
Cow position: chr4:529908-530307 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 183

Conread position: 1-383
Cow position: chr4:3126301-3126707 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 161

Conread position: 1-383
Cow position: chr4:4416580-4416962 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 182

Conread position: 1-383
Cow position: chr4:5444327-5443929 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 183

Conread position: 1-383
Cow position: chr4:12240700-12240315 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 29

Conread position: 1-383
Cow position: chr4:13493828-13494233 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 182

Conread position: 1-383
Cow position: chr4:16057188-16057583 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 70

Conread position: 1-383
Cow position: chr4:17925451-17925063 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 24

Conread position: 1-383
Cow position: chr4:27334222-27334615 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 183

Conread position: 1-383
Cow position: chr4:28832069-28832465 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 133

Conread position: 1-383
Cow position: chr4:31564794-31564401 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 23

Conread position: 1-383
Cow position: chr4:32212678-32213067 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 184

Conread position: 1-383
Cow position: chr4:33072311-33071918 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 182

Conread position: 1-383
Cow position: chr4:36896882-36897277 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 183

Conread position: 1-383
Cow position: chr4:43319133-43318737 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 183

Conread position: 1-383
Cow position: chr4:44780716-44780322 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 183

Conread position: 1-383
Cow position: chr4:57984491-57984890 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 81

Conread position: 1-386
Cow position: chr4:14775951-14776357 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 278
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 90, 272

Conread position: 1-393
Cow position: chr4:18337372-18337768 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 183

Conread position: 1-394
Cow position: chr4:12587842-12588248 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 303, 183

Conread position: 1-394
Cow position: chr4:43881615-43882021 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 182

Conread position: 1-394
Cow position: chr4:44726106-44726504 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 104

Conread position: 1-429
Cow position: chr4:10882056-10882505 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 183

Conread position: 2-394
Cow position: chr4:16639121-16639529 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 182

Conread position: 3-383
Cow position: chr4:6489852-6489461 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 181

Conread position: 7-331
Cow position: chr4:5880677-5880994 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 228
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 210, 84

Conread position: 10-383
Cow position: chr4:27300962-27300581 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 40

Conread position: 26-380
Cow position: chr4:33494125-33494489 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 76

Conread position: 33-247
Cow position: chr4:100263-100049 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 150
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 179, 151

Conread position: 59-380
Cow position: chr4:51042724-51042394 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 126

Conread position: 61-321
Cow position: chr4:41958983-41959247 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 191
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 149, 123

Conread position: 61-330
Cow position: chr4:41955322-41955597 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 191
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 156, 123

Conread position: 66-375
Cow position: chr4:45106032-45106355 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 229
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 151, 118

Conread position: 68-383
Cow position: chr4:14820292-14819958 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 228
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 164, 11

Conread position: 86-339
Cow position: chr4:38929998-38930250 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 173
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 161, 100

Conread position: 96-327
Cow position: chr4:30471836-30472064 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 165
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 121, 23

Conread position: 119-394
Cow position: chr4:69521190-69521453 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 196
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 98, 64

Conread position: 192-394
Cow position: chr4:34178540-34178319 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 158
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 25, 0

Conread position: 196-394
Cow position: chr4:26877079-26876863 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 160
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 23, 0

Show alignments to all cow chromosomes.