Cow genome map
Conread name: | Spl1-SPL01C050096 |
Conread position: | 1-330 |
Cow position: | chr8:42158963-42158631 (view UCSC Genome Browser custom track) |
Alignm length: | 334 |
Alignm identity: | 256 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 216, 182 |
Conread position: | 1-331 |
Cow position: | chr8:9736262-9736596 (view UCSC Genome Browser custom track) |
Alignm length: | 339 |
Alignm identity: | 253 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 77, 69 |
Conread position: | 1-331 |
Cow position: | chr8:30891292-30890961 (view UCSC Genome Browser custom track) |
Alignm length: | 334 |
Alignm identity: | 235 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 216, 183 |
Conread position: | 1-331 |
Cow position: | chr8:37932114-37932445 (view UCSC Genome Browser custom track) |
Alignm length: | 334 |
Alignm identity: | 233 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 216, 183 |
Conread position: | 1-339 |
Cow position: | chr8:60061407-60061745 (view UCSC Genome Browser custom track) |
Alignm length: | 342 |
Alignm identity: | 252 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 215, 183 |
Conread position: | 1-351 |
Cow position: | chr8:42468687-42469043 (view UCSC Genome Browser custom track) |
Alignm length: | 361 |
Alignm identity: | 266 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 210, 70 |
Conread position: | 1-365 |
Cow position: | chr8:4785846-4785481 (view UCSC Genome Browser custom track) |
Alignm length: | 374 |
Alignm identity: | 273 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 150, 64 |
Conread position: | 1-367 |
Cow position: | chr8:42419413-42419040 (view UCSC Genome Browser custom track) |
Alignm length: | 383 |
Alignm identity: | 273 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 106, 38 |
Conread position: | 1-371 |
Cow position: | chr8:8315437-8315051 (view UCSC Genome Browser custom track) |
Alignm length: | 388 |
Alignm identity: | 284 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 220, 185 |
Conread position: | 1-372 |
Cow position: | chr8:25417829-25417448 (view UCSC Genome Browser custom track) |
Alignm length: | 392 |
Alignm identity: | 269 |
Alignm E-value: | 4e-39 |
Alignm gaps (pig, cow): | 53, 80 |
Conread position: | 1-375 |
Cow position: | chr8:2447249-2447625 (view UCSC Genome Browser custom track) |
Alignm length: | 379 |
Alignm identity: | 265 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 216, 183 |
Conread position: | 1-375 |
Cow position: | chr8:6064753-6064376 (view UCSC Genome Browser custom track) |
Alignm length: | 378 |
Alignm identity: | 263 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 213, 0 |
Conread position: | 1-375 |
Cow position: | chr8:34348697-34349082 (view UCSC Genome Browser custom track) |
Alignm length: | 387 |
Alignm identity: | 270 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 216, 183 |
Conread position: | 1-379 |
Cow position: | chr8:11802845-11803237 (view UCSC Genome Browser custom track) |
Alignm length: | 397 |
Alignm identity: | 291 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 44, 185 |
Conread position: | 1-381 |
Cow position: | chr8:41644647-41644256 (view UCSC Genome Browser custom track) |
Alignm length: | 398 |
Alignm identity: | 310 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 159, 106 |
Conread position: | 1-383 |
Cow position: | chr8:1320066-1320458 (view UCSC Genome Browser custom track) |
Alignm length: | 397 |
Alignm identity: | 279 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 216, 57 |
Conread position: | 1-383 |
Cow position: | chr8:2886771-2887168 (view UCSC Genome Browser custom track) |
Alignm length: | 400 |
Alignm identity: | 267 |
Alignm E-value: | 4.00001e-40 |
Alignm gaps (pig, cow): | 216, 183 |
Conread position: | 1-383 |
Cow position: | chr8:3785660-3786056 (view UCSC Genome Browser custom track) |
Alignm length: | 398 |
Alignm identity: | 289 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 218, 183 |
Conread position: | 1-383 |
Cow position: | chr8:3855991-3855607 (view UCSC Genome Browser custom track) |
Alignm length: | 396 |
Alignm identity: | 284 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 218, 81 |
Conread position: | 1-383 |
Cow position: | chr8:5017203-5017599 (view UCSC Genome Browser custom track) |
Alignm length: | 398 |
Alignm identity: | 302 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 216, 183 |
Conread position: | 1-383 |
Cow position: | chr8:7161921-7162315 (view UCSC Genome Browser custom track) |
Alignm length: | 397 |
Alignm identity: | 286 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 216, 173 |
Conread position: | 1-383 |
Cow position: | chr8:8401091-8400695 (view UCSC Genome Browser custom track) |
Alignm length: | 399 |
Alignm identity: | 282 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 214, 144 |
Conread position: | 1-383 |
Cow position: | chr8:8517563-8517182 (view UCSC Genome Browser custom track) |
Alignm length: | 391 |
Alignm identity: | 270 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 174, 39 |
Conread position: | 1-383 |
Cow position: | chr8:8911531-8911899 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 276 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 215, 81 |
Conread position: | 1-383 |
Cow position: | chr8:10749388-10749776 (view UCSC Genome Browser custom track) |
Alignm length: | 394 |
Alignm identity: | 264 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 221, 121 |
Conread position: | 1-383 |
Cow position: | chr8:14590878-14590481 (view UCSC Genome Browser custom track) |
Alignm length: | 399 |
Alignm identity: | 294 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 216, 183 |
Conread position: | 1-383 |
Cow position: | chr8:14927855-14927464 (view UCSC Genome Browser custom track) |
Alignm length: | 398 |
Alignm identity: | 293 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 216, 183 |
Conread position: | 1-383 |
Cow position: | chr8:17312047-17312448 (view UCSC Genome Browser custom track) |
Alignm length: | 403 |
Alignm identity: | 293 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 217, 183 |
Conread position: | 1-383 |
Cow position: | chr8:19330737-19331132 (view UCSC Genome Browser custom track) |
Alignm length: | 398 |
Alignm identity: | 296 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 218, 8 |
Conread position: | 1-383 |
Cow position: | chr8:22571286-22570890 (view UCSC Genome Browser custom track) |
Alignm length: | 400 |
Alignm identity: | 274 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 216, 183 |
Conread position: | 1-383 |
Cow position: | chr8:24915312-24914917 (view UCSC Genome Browser custom track) |
Alignm length: | 397 |
Alignm identity: | 294 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 216, 182 |
Conread position: | 1-383 |
Cow position: | chr8:28878076-28877682 (view UCSC Genome Browser custom track) |
Alignm length: | 402 |
Alignm identity: | 301 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 218, 49 |
Conread position: | 1-383 |
Cow position: | chr8:29007666-29008056 (view UCSC Genome Browser custom track) |
Alignm length: | 398 |
Alignm identity: | 295 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 216, 104 |
Conread position: | 1-383 |
Cow position: | chr8:32041722-32041344 (view UCSC Genome Browser custom track) |
Alignm length: | 390 |
Alignm identity: | 265 |
Alignm E-value: | 1.96182e-44 |
Alignm gaps (pig, cow): | 209, 183 |
Conread position: | 1-383 |
Cow position: | chr8:32631004-32630617 (view UCSC Genome Browser custom track) |
Alignm length: | 393 |
Alignm identity: | 282 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 209, 183 |
Conread position: | 1-383 |
Cow position: | chr8:38577387-38576986 (view UCSC Genome Browser custom track) |
Alignm length: | 409 |
Alignm identity: | 274 |
Alignm E-value: | 6e-33 |
Alignm gaps (pig, cow): | 49, 121 |
Conread position: | 1-383 |
Cow position: | chr8:42484940-42485335 (view UCSC Genome Browser custom track) |
Alignm length: | 397 |
Alignm identity: | 294 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 216, 183 |
Conread position: | 1-383 |
Cow position: | chr8:42579555-42579167 (view UCSC Genome Browser custom track) |
Alignm length: | 392 |
Alignm identity: | 274 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 218, 183 |
Conread position: | 1-383 |
Cow position: | chr8:46051211-46051598 (view UCSC Genome Browser custom track) |
Alignm length: | 397 |
Alignm identity: | 299 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 216, 182 |
Conread position: | 1-383 |
Cow position: | chr8:47661296-47660901 (view UCSC Genome Browser custom track) |
Alignm length: | 397 |
Alignm identity: | 295 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 216, 185 |
Conread position: | 1-383 |
Cow position: | chr8:49859737-49859346 (view UCSC Genome Browser custom track) |
Alignm length: | 401 |
Alignm identity: | 302 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 218, 57 |
Conread position: | 1-383 |
Cow position: | chr8:50287900-50287509 (view UCSC Genome Browser custom track) |
Alignm length: | 395 |
Alignm identity: | 294 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 71, 24 |
Conread position: | 1-383 |
Cow position: | chr8:59261894-59261509 (view UCSC Genome Browser custom track) |
Alignm length: | 391 |
Alignm identity: | 281 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 216, 13 |
Conread position: | 1-383 |
Cow position: | chr8:61906183-61906580 (view UCSC Genome Browser custom track) |
Alignm length: | 399 |
Alignm identity: | 281 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 213, 312 |
Conread position: | 1-384 |
Cow position: | chr8:38606179-38605791 (view UCSC Genome Browser custom track) |
Alignm length: | 391 |
Alignm identity: | 303 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 82 |
Conread position: | 1-388 |
Cow position: | chr8:36635475-36635083 (view UCSC Genome Browser custom track) |
Alignm length: | 400 |
Alignm identity: | 291 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 193, 81 |
Conread position: | 1-394 |
Cow position: | chr8:22128596-22129005 (view UCSC Genome Browser custom track) |
Alignm length: | 412 |
Alignm identity: | 287 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 216, 22 |
Conread position: | 1-394 |
Cow position: | chr8:23771661-23772074 (view UCSC Genome Browser custom track) |
Alignm length: | 421 |
Alignm identity: | 291 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 216, 95 |
Conread position: | 1-394 |
Cow position: | chr8:25775651-25775239 (view UCSC Genome Browser custom track) |
Alignm length: | 415 |
Alignm identity: | 294 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 214, 129 |
Conread position: | 1-394 |
Cow position: | chr8:32318527-32318119 (view UCSC Genome Browser custom track) |
Alignm length: | 411 |
Alignm identity: | 299 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 218, 40 |
Conread position: | 1-394 |
Cow position: | chr8:33589399-33589811 (view UCSC Genome Browser custom track) |
Alignm length: | 414 |
Alignm identity: | 309 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 216, 183 |
Conread position: | 1-429 |
Cow position: | chr8:4687426-4687869 (view UCSC Genome Browser custom track) |
Alignm length: | 447 |
Alignm identity: | 327 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 218, 183 |
Conread position: | 1-439 |
Cow position: | chr8:38391681-38392111 (view UCSC Genome Browser custom track) |
Alignm length: | 454 |
Alignm identity: | 329 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 218, 129 |
Conread position: | 2-331 |
Cow position: | chr8:8556124-8555794 (view UCSC Genome Browser custom track) |
Alignm length: | 333 |
Alignm identity: | 230 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 216, 182 |
Conread position: | 2-394 |
Cow position: | chr8:25408755-25409161 (view UCSC Genome Browser custom track) |
Alignm length: | 411 |
Alignm identity: | 301 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 215, 103 |
Conread position: | 3-394 |
Cow position: | chr8:51666798-51666387 (view UCSC Genome Browser custom track) |
Alignm length: | 414 |
Alignm identity: | 298 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 12, 182 |
Conread position: | 4-383 |
Cow position: | chr8:50994800-50995189 (view UCSC Genome Browser custom track) |
Alignm length: | 397 |
Alignm identity: | 286 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 60, 68 |
Conread position: | 7-383 |
Cow position: | chr8:38585312-38584929 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 268 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 209, 141 |
Conread position: | 7-394 |
Cow position: | chr8:10742640-10742235 (view UCSC Genome Browser custom track) |
Alignm length: | 407 |
Alignm identity: | 299 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 211, 177 |
Conread position: | 14-383 |
Cow position: | chr8:32437046-32436666 (view UCSC Genome Browser custom track) |
Alignm length: | 384 |
Alignm identity: | 273 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 196, 170 |
Conread position: | 23-394 |
Cow position: | chr8:12450063-12450457 (view UCSC Genome Browser custom track) |
Alignm length: | 396 |
Alignm identity: | 286 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 13, 162 |
Conread position: | 33-329 |
Cow position: | chr8:45450360-45450655 (view UCSC Genome Browser custom track) |
Alignm length: | 300 |
Alignm identity: | 230 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 59, 154 |
Conread position: | 43-383 |
Cow position: | chr8:50960531-50960183 (view UCSC Genome Browser custom track) |
Alignm length: | 359 |
Alignm identity: | 241 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 176, 42 |
Conread position: | 47-249 |
Cow position: | chr8:46420586-46420784 (view UCSC Genome Browser custom track) |
Alignm length: | 204 |
Alignm identity: | 143 |
Alignm E-value: | 6e-24 |
Alignm gaps (pig, cow): | 167, 19 |
Conread position: | 48-383 |
Cow position: | chr8:58185507-58185171 (view UCSC Genome Browser custom track) |
Alignm length: | 345 |
Alignm identity: | 256 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 169, 136 |
Conread position: | 49-383 |
Cow position: | chr8:21157719-21157373 (view UCSC Genome Browser custom track) |
Alignm length: | 348 |
Alignm identity: | 256 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 58, 136 |
Conread position: | 71-383 |
Cow position: | chr8:25377076-25377401 (view UCSC Genome Browser custom track) |
Alignm length: | 328 |
Alignm identity: | 227 |
Alignm E-value: | 9e-37 |
Alignm gaps (pig, cow): | 146, 101 |
Conread position: | 71-386 |
Cow position: | chr8:12801507-12801828 (view UCSC Genome Browser custom track) |
Alignm length: | 327 |
Alignm identity: | 236 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 144, 113 |
Conread position: | 72-353 |
Cow position: | chr8:25437413-25437697 (view UCSC Genome Browser custom track) |
Alignm length: | 293 |
Alignm identity: | 213 |
Alignm E-value: | 9.99995e-41 |
Alignm gaps (pig, cow): | 7, 15 |
Conread position: | 82-383 |
Cow position: | chr8:19189765-19190080 (view UCSC Genome Browser custom track) |
Alignm length: | 319 |
Alignm identity: | 216 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 138, 103 |
Conread position: | 82-439 |
Cow position: | chr8:47886994-47887368 (view UCSC Genome Browser custom track) |
Alignm length: | 379 |
Alignm identity: | 276 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 218, 102 |
Conread position: | 85-374 |
Cow position: | chr8:41944819-41945105 (view UCSC Genome Browser custom track) |
Alignm length: | 295 |
Alignm identity: | 212 |
Alignm E-value: | 4.99983e-42 |
Alignm gaps (pig, cow): | 131, 18 |
Conread position: | 96-383 |
Cow position: | chr8:1348147-1347835 (view UCSC Genome Browser custom track) |
Alignm length: | 314 |
Alignm identity: | 225 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 89, 228 |
Conread position: | 97-386 |
Cow position: | chr8:14631549-14631248 (view UCSC Genome Browser custom track) |
Alignm length: | 304 |
Alignm identity: | 221 |
Alignm E-value: | 1.96182e-44 |
Alignm gaps (pig, cow): | 120, 52 |
Conread position: | 107-365 |
Cow position: | chr8:45449908-45450173 (view UCSC Genome Browser custom track) |
Alignm length: | 270 |
Alignm identity: | 199 |
Alignm E-value: | 4.00001e-40 |
Alignm gaps (pig, cow): | 110, 50 |
Conread position: | 107-383 |
Cow position: | chr8:47673979-47674263 (view UCSC Genome Browser custom track) |
Alignm length: | 287 |
Alignm identity: | 200 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 112, 77 |
Conread position: | 146-394 |
Cow position: | chr8:54017378-54017119 (view UCSC Genome Browser custom track) |
Alignm length: | 264 |
Alignm identity: | 186 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 106, 38 |
Conread position: | 166-383 |
Cow position: | chr8:21230272-21230499 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 160 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 50, 84 |
Conread position: | 219-383 |
Cow position: | chr8:53427738-53427913 (view UCSC Genome Browser custom track) |
Alignm length: | 177 |
Alignm identity: | 130 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 7, 42 |
Show alignments to all cow chromosomes.