Cow genome map

Conread name: Spl1-SPL01C050096

Conread position: 1-330
Cow position: chr8:42158963-42158631 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 182

Conread position: 1-331
Cow position: chr8:9736262-9736596 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 69

Conread position: 1-331
Cow position: chr8:30891292-30890961 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 183

Conread position: 1-331
Cow position: chr8:37932114-37932445 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 183

Conread position: 1-339
Cow position: chr8:60061407-60061745 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 183

Conread position: 1-351
Cow position: chr8:42468687-42469043 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 70

Conread position: 1-365
Cow position: chr8:4785846-4785481 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 64

Conread position: 1-367
Cow position: chr8:42419413-42419040 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 38

Conread position: 1-371
Cow position: chr8:8315437-8315051 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 185

Conread position: 1-372
Cow position: chr8:25417829-25417448 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 269
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 53, 80

Conread position: 1-375
Cow position: chr8:2447249-2447625 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 183

Conread position: 1-375
Cow position: chr8:6064753-6064376 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 0

Conread position: 1-375
Cow position: chr8:34348697-34349082 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 183

Conread position: 1-379
Cow position: chr8:11802845-11803237 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 185

Conread position: 1-381
Cow position: chr8:41644647-41644256 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 106

Conread position: 1-383
Cow position: chr8:1320066-1320458 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 57

Conread position: 1-383
Cow position: chr8:2886771-2887168 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 267
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 216, 183

Conread position: 1-383
Cow position: chr8:3785660-3786056 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 183

Conread position: 1-383
Cow position: chr8:3855991-3855607 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 81

Conread position: 1-383
Cow position: chr8:5017203-5017599 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 183

Conread position: 1-383
Cow position: chr8:7161921-7162315 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 173

Conread position: 1-383
Cow position: chr8:8401091-8400695 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 144

Conread position: 1-383
Cow position: chr8:8517563-8517182 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 39

Conread position: 1-383
Cow position: chr8:8911531-8911899 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 81

Conread position: 1-383
Cow position: chr8:10749388-10749776 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 264
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 221, 121

Conread position: 1-383
Cow position: chr8:14590878-14590481 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 183

Conread position: 1-383
Cow position: chr8:14927855-14927464 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 183

Conread position: 1-383
Cow position: chr8:17312047-17312448 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 183

Conread position: 1-383
Cow position: chr8:19330737-19331132 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 8

Conread position: 1-383
Cow position: chr8:22571286-22570890 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 183

Conread position: 1-383
Cow position: chr8:24915312-24914917 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 182

Conread position: 1-383
Cow position: chr8:28878076-28877682 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 49

Conread position: 1-383
Cow position: chr8:29007666-29008056 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 104

Conread position: 1-383
Cow position: chr8:32041722-32041344 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 265
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 209, 183

Conread position: 1-383
Cow position: chr8:32631004-32630617 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 183

Conread position: 1-383
Cow position: chr8:38577387-38576986 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 274
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 49, 121

Conread position: 1-383
Cow position: chr8:42484940-42485335 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 183

Conread position: 1-383
Cow position: chr8:42579555-42579167 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 183

Conread position: 1-383
Cow position: chr8:46051211-46051598 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 182

Conread position: 1-383
Cow position: chr8:47661296-47660901 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 185

Conread position: 1-383
Cow position: chr8:49859737-49859346 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 57

Conread position: 1-383
Cow position: chr8:50287900-50287509 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 24

Conread position: 1-383
Cow position: chr8:59261894-59261509 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 13

Conread position: 1-383
Cow position: chr8:61906183-61906580 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 312

Conread position: 1-384
Cow position: chr8:38606179-38605791 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 82

Conread position: 1-388
Cow position: chr8:36635475-36635083 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 81

Conread position: 1-394
Cow position: chr8:22128596-22129005 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 22

Conread position: 1-394
Cow position: chr8:23771661-23772074 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 291
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 216, 95

Conread position: 1-394
Cow position: chr8:25775651-25775239 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 129

Conread position: 1-394
Cow position: chr8:32318527-32318119 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 40

Conread position: 1-394
Cow position: chr8:33589399-33589811 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 183

Conread position: 1-429
Cow position: chr8:4687426-4687869 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 183

Conread position: 1-439
Cow position: chr8:38391681-38392111 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 129

Conread position: 2-331
Cow position: chr8:8556124-8555794 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 182

Conread position: 2-394
Cow position: chr8:25408755-25409161 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 103

Conread position: 3-394
Cow position: chr8:51666798-51666387 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 182

Conread position: 4-383
Cow position: chr8:50994800-50995189 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 68

Conread position: 7-383
Cow position: chr8:38585312-38584929 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 141

Conread position: 7-394
Cow position: chr8:10742640-10742235 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 177

Conread position: 14-383
Cow position: chr8:32437046-32436666 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 170

Conread position: 23-394
Cow position: chr8:12450063-12450457 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 162

Conread position: 33-329
Cow position: chr8:45450360-45450655 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 154

Conread position: 43-383
Cow position: chr8:50960531-50960183 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 241
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 176, 42

Conread position: 47-249
Cow position: chr8:46420586-46420784 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 143
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 167, 19

Conread position: 48-383
Cow position: chr8:58185507-58185171 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 136

Conread position: 49-383
Cow position: chr8:21157719-21157373 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 136

Conread position: 71-383
Cow position: chr8:25377076-25377401 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 227
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 146, 101

Conread position: 71-386
Cow position: chr8:12801507-12801828 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 113

Conread position: 72-353
Cow position: chr8:25437413-25437697 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 213
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 7, 15

Conread position: 82-383
Cow position: chr8:19189765-19190080 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 216
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 138, 103

Conread position: 82-439
Cow position: chr8:47886994-47887368 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 102

Conread position: 85-374
Cow position: chr8:41944819-41945105 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 212
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 131, 18

Conread position: 96-383
Cow position: chr8:1348147-1347835 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 225
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 89, 228

Conread position: 97-386
Cow position: chr8:14631549-14631248 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 221
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 120, 52

Conread position: 107-365
Cow position: chr8:45449908-45450173 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 199
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 110, 50

Conread position: 107-383
Cow position: chr8:47673979-47674263 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 200
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 112, 77

Conread position: 146-394
Cow position: chr8:54017378-54017119 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 186
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 106, 38

Conread position: 166-383
Cow position: chr8:21230272-21230499 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 160
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 50, 84

Conread position: 219-383
Cow position: chr8:53427738-53427913 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 130
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 7, 42

Show alignments to all cow chromosomes.