Cow genome map

Conread name: Spl1-SPL01E050073

Conread position: 6-311
Cow position: chr11:8437468-8437777 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 210
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 22, 64

Conread position: 8-728
Cow position: chr11:7874357-7873644 (view UCSC Genome Browser custom track)
Alignm length: 732
Alignm identity: 496
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 109

Conread position: 22-372
Cow position: chr11:48650191-48649834 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 235
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 16, 155

Conread position: 30-250
Cow position: chr11:2484600-2484817 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 153
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 25, 74

Conread position: 34-282
Cow position: chr11:15017249-15017005 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 176
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 28, 75

Conread position: 34-399
Cow position: chr11:80923135-80923501 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 21

Conread position: 34-464
Cow position: chr11:66188130-66188576 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 304
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 28, 43

Conread position: 35-276
Cow position: chr11:46922697-46922933 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 168
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 27, 80

Conread position: 35-308
Cow position: chr11:29699497-29699781 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 191
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 27, 204

Conread position: 35-350
Cow position: chr11:49872698-49873013 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 217
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 27, 19

Conread position: 35-354
Cow position: chr11:41293614-41293948 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 222
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 27, 293

Conread position: 35-355
Cow position: chr11:67614735-67615059 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 238
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 27, 74

Conread position: 35-364
Cow position: chr11:69978155-69977838 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 228
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 18, 38

Conread position: 35-369
Cow position: chr11:63998896-63999234 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 242
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 21, 85

Conread position: 35-380
Cow position: chr11:5201456-5201805 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 241
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 27, 38

Conread position: 35-383
Cow position: chr11:6202640-6202288 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 234
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 95, 14

Conread position: 35-384
Cow position: chr11:3175858-3175531 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 237
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 27, 33

Conread position: 35-384
Cow position: chr11:11647286-11646910 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 256
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 72, 184

Conread position: 35-385
Cow position: chr11:15772525-15772880 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 246
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 27, 10

Conread position: 35-385
Cow position: chr11:80556408-80556060 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 252
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 27, 80

Conread position: 35-399
Cow position: chr11:27404881-27405243 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 265
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 27, 92

Conread position: 35-399
Cow position: chr11:32421295-32421661 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 233
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 27, 130

Conread position: 35-399
Cow position: chr11:71492674-71493035 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 252
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 151, 29

Conread position: 35-471
Cow position: chr11:83398097-83397643 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 301
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 28, 91

Conread position: 35-474
Cow position: chr11:27747107-27746653 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 316
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 152, 80

Conread position: 35-487
Cow position: chr11:83043177-83043638 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 77

Conread position: 35-488
Cow position: chr11:15632370-15632834 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 333
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 28, 62

Conread position: 35-640
Cow position: chr11:46746827-46746209 (view UCSC Genome Browser custom track)
Alignm length: 635
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 63

Conread position: 35-715
Cow position: chr11:30165700-30164996 (view UCSC Genome Browser custom track)
Alignm length: 717
Alignm identity: 485
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 90

Conread position: 35-716
Cow position: chr11:13061063-13061717 (view UCSC Genome Browser custom track)
Alignm length: 694
Alignm identity: 511
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 60

Conread position: 35-717
Cow position: chr11:52297031-52297718 (view UCSC Genome Browser custom track)
Alignm length: 714
Alignm identity: 515
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 79

Conread position: 35-722
Cow position: chr11:77745058-77745774 (view UCSC Genome Browser custom track)
Alignm length: 724
Alignm identity: 491
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 96

Conread position: 35-728
Cow position: chr11:10095533-10094837 (view UCSC Genome Browser custom track)
Alignm length: 719
Alignm identity: 491
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 68

Conread position: 36-267
Cow position: chr11:4225274-4225059 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 164
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 150, 11

Conread position: 36-321
Cow position: chr11:17676187-17676467 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 198
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 154, 72

Conread position: 36-405
Cow position: chr11:42884597-42884957 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 245
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 25, 18

Conread position: 36-484
Cow position: chr11:79728484-79728948 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 328
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 26, 18

Conread position: 36-486
Cow position: chr11:35347563-35348034 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 317
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 26, 12

Conread position: 36-496
Cow position: chr11:62226200-62225713 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 296

Conread position: 36-508
Cow position: chr11:19487291-19487774 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 317
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 26, 18

Conread position: 36-728
Cow position: chr11:10992453-10991749 (view UCSC Genome Browser custom track)
Alignm length: 728
Alignm identity: 502
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 81

Conread position: 36-729
Cow position: chr11:42016449-42017142 (view UCSC Genome Browser custom track)
Alignm length: 721
Alignm identity: 497
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 76

Conread position: 37-251
Cow position: chr11:56115124-56114916 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 154
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 25, 17

Conread position: 37-304
Cow position: chr11:17721613-17721885 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 200
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 25, 68

Conread position: 38-285
Cow position: chr11:67312975-67312724 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 169
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 18, 11

Conread position: 38-366
Cow position: chr11:81134983-81135306 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 227
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 148, 70

Conread position: 38-399
Cow position: chr11:74316893-74316536 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 256
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 24, 104

Conread position: 40-300
Cow position: chr11:4636990-4637250 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 184
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 23, 69

Conread position: 40-387
Cow position: chr11:43360602-43360950 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 243
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 23, 75

Conread position: 40-404
Cow position: chr11:11558357-11557983 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 70

Conread position: 40-405
Cow position: chr11:4207496-4207127 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 251
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 91, 37

Conread position: 40-405
Cow position: chr11:65762401-65762783 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 18

Conread position: 40-480
Cow position: chr11:44223066-44222630 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 303
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 22, 33

Conread position: 40-498
Cow position: chr11:85723879-85723413 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 63

Conread position: 40-542
Cow position: chr11:86925779-86926252 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 352
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 118, 71

Conread position: 40-717
Cow position: chr11:1625037-1625722 (view UCSC Genome Browser custom track)
Alignm length: 704
Alignm identity: 502
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 69

Conread position: 40-717
Cow position: chr11:38639284-38638615 (view UCSC Genome Browser custom track)
Alignm length: 699
Alignm identity: 484
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 88

Conread position: 41-399
Cow position: chr11:34646779-34646414 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 274

Conread position: 41-399
Cow position: chr11:55053047-55052708 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 251
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 21, 36

Conread position: 41-414
Cow position: chr11:16906847-16907236 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 266
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 21, 183

Conread position: 41-462
Cow position: chr11:35153636-35154080 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 43

Conread position: 41-714
Cow position: chr11:35580445-35579753 (view UCSC Genome Browser custom track)
Alignm length: 704
Alignm identity: 512
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 68

Conread position: 41-717
Cow position: chr11:50152629-50153319 (view UCSC Genome Browser custom track)
Alignm length: 704
Alignm identity: 528
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 66

Conread position: 50-507
Cow position: chr11:87155695-87155215 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 319
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 136, 65

Conread position: 54-379
Cow position: chr11:62663072-62663375 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 228
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 134, 23

Conread position: 54-731
Cow position: chr11:18508859-18509528 (view UCSC Genome Browser custom track)
Alignm length: 688
Alignm identity: 486
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 52

Conread position: 57-457
Cow position: chr11:2917426-2917827 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 51

Conread position: 57-728
Cow position: chr11:259009-259698 (view UCSC Genome Browser custom track)
Alignm length: 708
Alignm identity: 477
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 51

Conread position: 58-394
Cow position: chr11:45435241-45434918 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 251
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 130, 23

Conread position: 58-399
Cow position: chr11:62620542-62620206 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 53

Conread position: 58-728
Cow position: chr11:30192344-30191645 (view UCSC Genome Browser custom track)
Alignm length: 709
Alignm identity: 507
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 17

Conread position: 60-328
Cow position: chr11:5217296-5217570 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 188
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 123, 46

Conread position: 60-492
Cow position: chr11:17083150-17083580 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 47

Conread position: 60-717
Cow position: chr11:17227487-17228151 (view UCSC Genome Browser custom track)
Alignm length: 685
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 42

Conread position: 61-242
Cow position: chr11:70741319-70741129 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 145
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 30, 10

Conread position: 61-249
Cow position: chr11:30986799-30986621 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 138
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 125, 47

Conread position: 61-253
Cow position: chr11:47784943-47784750 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 138
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 46, 84

Conread position: 61-259
Cow position: chr11:3896535-3896729 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 142
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 125, 68

Conread position: 61-259
Cow position: chr11:15382332-15382533 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 147
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 88, 0

Conread position: 61-266
Cow position: chr11:30894840-30895040 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 150
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 129, 55

Conread position: 61-267
Cow position: chr11:72292724-72292514 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 155
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 47, 0

Conread position: 61-277
Cow position: chr11:25119773-25119978 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 152
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 125, 40

Conread position: 61-284
Cow position: chr11:30964506-30964291 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 162
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 78, 50

Conread position: 61-288
Cow position: chr11:1932325-1932550 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 165
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 120, 48

Conread position: 61-305
Cow position: chr11:63866498-63866736 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 180
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 97, 52

Conread position: 61-323
Cow position: chr11:42159899-42160159 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 193
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 127, 16

Conread position: 61-325
Cow position: chr11:80412846-80413112 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 179
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 127, 69

Conread position: 61-328
Cow position: chr11:16315037-16314769 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 182
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 125, 54

Conread position: 61-339
Cow position: chr11:30728564-30728290 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 190
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 92, 28

Conread position: 61-344
Cow position: chr11:26274803-26275077 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 209
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 127, 43

Conread position: 61-350
Cow position: chr11:40608430-40608722 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 220
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 125, 44

Conread position: 61-359
Cow position: chr11:35980978-35981278 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 210
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 90, 41

Conread position: 61-360
Cow position: chr11:62789290-62788993 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 214
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 125, 41

Conread position: 61-364
Cow position: chr11:47772219-47772531 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 81

Conread position: 61-365
Cow position: chr11:50472481-50472176 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 209
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 125, 50

Conread position: 61-368
Cow position: chr11:21421775-21422079 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 201
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 90, 39

Conread position: 61-368
Cow position: chr11:64009889-64009575 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 211
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 90, 40

Conread position: 61-371
Cow position: chr11:23407623-23407315 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 223
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 127, 47

Conread position: 61-373
Cow position: chr11:68112096-68112411 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 218
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 92, 41

Conread position: 61-374
Cow position: chr11:32126779-32126461 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 214
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 74, 55

Conread position: 61-377
Cow position: chr11:18852066-18851766 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 0

Conread position: 61-377
Cow position: chr11:32254053-32254371 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 219
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 89, 46

Conread position: 61-380
Cow position: chr11:63435685-63435362 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 231
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 125, 60

Conread position: 61-382
Cow position: chr11:40395599-40395282 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 220
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 125, 47

Conread position: 61-384
Cow position: chr11:6245484-6245162 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 230
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 70, 50

Conread position: 61-385
Cow position: chr11:42296464-42296778 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 234
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 17, 36

Conread position: 61-385
Cow position: chr11:48296188-48295872 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 25

Conread position: 61-385
Cow position: chr11:66289716-66289399 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 210
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 125, 60

Conread position: 61-393
Cow position: chr11:67600941-67600611 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 232
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 127, 77

Conread position: 61-394
Cow position: chr11:261094-261426 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 238
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 47, 28

Conread position: 61-394
Cow position: chr11:25620227-25620566 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 237
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 126, 54

Conread position: 61-397
Cow position: chr11:28993585-28993904 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 240
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 125, 75

Conread position: 61-397
Cow position: chr11:32055022-32055360 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 232
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 123, 46

Conread position: 61-398
Cow position: chr11:34144756-34145090 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 232
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 200, 123

Conread position: 61-398
Cow position: chr11:41215896-41215570 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 227
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 128, 26

Conread position: 61-399
Cow position: chr11:2874565-2874211 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 239
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 66, 53

Conread position: 61-399
Cow position: chr11:7458117-7458464 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 234
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 85, 60

Conread position: 61-399
Cow position: chr11:35724133-35723802 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 229
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 90, 50

Conread position: 61-399
Cow position: chr11:64077339-64077677 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 229
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 125, 62

Conread position: 61-399
Cow position: chr11:72375503-72375863 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 245
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 50, 196

Conread position: 61-400
Cow position: chr11:70951030-70950708 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 226
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 127, 50

Conread position: 61-404
Cow position: chr11:14470524-14470185 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 235
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 128, 40

Conread position: 61-405
Cow position: chr11:68913306-68912956 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 241
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 90, 41

Conread position: 61-454
Cow position: chr11:62239904-62239505 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 286
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 126, 43

Conread position: 61-458
Cow position: chr11:65157242-65157656 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 287
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 126, 50

Conread position: 61-467
Cow position: chr11:36940431-36940858 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 284
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 85, 46

Conread position: 61-467
Cow position: chr11:45872147-45872576 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 298
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 92, 46

Conread position: 61-468
Cow position: chr11:20238839-20238414 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 47

Conread position: 61-470
Cow position: chr11:81162284-81162691 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 295
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 127, 47

Conread position: 61-483
Cow position: chr11:53773846-53773399 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 305
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 88, 46

Conread position: 61-484
Cow position: chr11:52380709-52381145 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 47

Conread position: 61-487
Cow position: chr11:21843976-21844410 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 47

Conread position: 61-487
Cow position: chr11:24602120-24601689 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 323, 14

Conread position: 61-487
Cow position: chr11:80564460-80564027 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 290
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 125, 71

Conread position: 61-488
Cow position: chr11:13042985-13043415 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 305
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 127, 47

Conread position: 61-491
Cow position: chr11:47755217-47755646 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 295
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 90, 41

Conread position: 61-493
Cow position: chr11:6233715-6234162 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 67

Conread position: 61-493
Cow position: chr11:78380906-78381329 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 308
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 127, 47

Conread position: 61-495
Cow position: chr11:68909690-68910132 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 54

Conread position: 61-496
Cow position: chr11:20762015-20761559 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 131

Conread position: 61-496
Cow position: chr11:49149209-49148763 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 315
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 125, 44

Conread position: 61-496
Cow position: chr11:75178061-75177605 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 291
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 97, 66

Conread position: 61-496
Cow position: chr11:83066655-83066209 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 59

Conread position: 61-507
Cow position: chr11:81300458-81300909 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 304
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 62, 46

Conread position: 61-514
Cow position: chr11:47351498-47351049 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 309
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 91, 39

Conread position: 61-518
Cow position: chr11:36182854-36182380 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 25

Conread position: 61-518
Cow position: chr11:46747696-46748177 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 321
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 125, 60

Conread position: 61-521
Cow position: chr11:7314986-7315436 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 323
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 93, 46

Conread position: 61-583
Cow position: chr11:70483688-70484234 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 49

Conread position: 61-604
Cow position: chr11:55744632-55744081 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 46

Conread position: 61-606
Cow position: chr11:1849002-1849557 (view UCSC Genome Browser custom track)
Alignm length: 573
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 15

Conread position: 61-618
Cow position: chr11:64029104-64029662 (view UCSC Genome Browser custom track)
Alignm length: 579
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 40

Conread position: 61-627
Cow position: chr11:17859990-17860569 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 65

Conread position: 61-662
Cow position: chr11:53778783-53778166 (view UCSC Genome Browser custom track)
Alignm length: 627
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 68

Conread position: 61-678
Cow position: chr11:27248651-27248029 (view UCSC Genome Browser custom track)
Alignm length: 641
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 52

Conread position: 61-678
Cow position: chr11:40818469-40819109 (view UCSC Genome Browser custom track)
Alignm length: 657
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 81

Conread position: 61-696
Cow position: chr11:8524955-8525586 (view UCSC Genome Browser custom track)
Alignm length: 651
Alignm identity: 464
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 45

Conread position: 61-696
Cow position: chr11:32199106-32198459 (view UCSC Genome Browser custom track)
Alignm length: 661
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 46

Conread position: 61-696
Cow position: chr11:35363660-35363011 (view UCSC Genome Browser custom track)
Alignm length: 667
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 200

Conread position: 61-710
Cow position: chr11:8496196-8495545 (view UCSC Genome Browser custom track)
Alignm length: 676
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 46

Conread position: 61-713
Cow position: chr11:77750598-77751269 (view UCSC Genome Browser custom track)
Alignm length: 680
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 117

Conread position: 61-716
Cow position: chr11:64044380-64043745 (view UCSC Genome Browser custom track)
Alignm length: 666
Alignm identity: 464
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 42

Conread position: 61-723
Cow position: chr11:30708668-30707986 (view UCSC Genome Browser custom track)
Alignm length: 698
Alignm identity: 475
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 56

Conread position: 61-728
Cow position: chr11:25791530-25792209 (view UCSC Genome Browser custom track)
Alignm length: 694
Alignm identity: 487
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 41

Conread position: 61-728
Cow position: chr11:42291677-42292351 (view UCSC Genome Browser custom track)
Alignm length: 690
Alignm identity: 471
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 39

Conread position: 61-728
Cow position: chr11:44032169-44031483 (view UCSC Genome Browser custom track)
Alignm length: 704
Alignm identity: 511
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 11

Conread position: 61-728
Cow position: chr11:75479859-75480551 (view UCSC Genome Browser custom track)
Alignm length: 704
Alignm identity: 475
Alignm E-value: 0
Alignm gaps (pig, cow): 199, 64

Conread position: 61-731
Cow position: chr11:17321828-17321150 (view UCSC Genome Browser custom track)
Alignm length: 703
Alignm identity: 486
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 147

Conread position: 62-332
Cow position: chr11:48086080-48085808 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 197
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 124, 49

Conread position: 62-341
Cow position: chr11:17036370-17036646 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 213
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 126, 46

Conread position: 62-380
Cow position: chr11:35213009-35213316 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 217
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 126, 17

Conread position: 62-397
Cow position: chr11:21728126-21728444 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 238
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 166, 46

Conread position: 62-399
Cow position: chr11:29960455-29960129 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 249
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 126, 63

Conread position: 62-405
Cow position: chr11:81406005-81406344 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 229
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 124, 53

Conread position: 62-461
Cow position: chr11:77319574-77319172 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 46

Conread position: 62-463
Cow position: chr11:48544598-48544190 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 291
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 107, 46

Conread position: 62-498
Cow position: chr11:83323739-83323289 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 303
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 64, 214

Conread position: 62-523
Cow position: chr11:40792530-40793014 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 325
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 6, 267

Conread position: 62-729
Cow position: chr11:17889565-17890240 (view UCSC Genome Browser custom track)
Alignm length: 694
Alignm identity: 474
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 40

Conread position: 63-252
Cow position: chr11:63165490-63165670 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 138
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 125, 41

Conread position: 63-257
Cow position: chr11:2900552-2900749 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 134
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 88, 0

Conread position: 63-385
Cow position: chr11:8544855-8545173 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 230
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 124, 48

Conread position: 63-484
Cow position: chr11:6399903-6400346 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 301
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 123, 45

Conread position: 64-325
Cow position: chr11:39060445-39060701 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 187
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 124, 46

Conread position: 64-452
Cow position: chr11:57724663-57725071 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 268
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 89, 43

Conread position: 64-532
Cow position: chr11:39499515-39499054 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 61

Conread position: 68-376
Cow position: chr11:70251072-70250774 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 217
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 120, 40

Conread position: 70-479
Cow position: chr11:55334073-55333639 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 292
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 55, 252

Conread position: 71-277
Cow position: chr11:21885986-21885784 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 145
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 115, 46

Conread position: 71-308
Cow position: chr11:33409110-33409345 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 173
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 117, 40

Conread position: 71-310
Cow position: chr11:62812799-62813038 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 181
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 117, 37

Conread position: 71-330
Cow position: chr11:30494144-30493893 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 191
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 115, 40

Conread position: 71-388
Cow position: chr11:84385484-84385801 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 218
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 117, 40

Conread position: 71-399
Cow position: chr11:2907378-2907696 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 39

Conread position: 71-399
Cow position: chr11:11469500-11469812 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 238
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 115, 37

Conread position: 71-474
Cow position: chr11:34121351-34120929 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 298
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 103, 37

Conread position: 71-487
Cow position: chr11:21549635-21549218 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 279
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 75, 62

Conread position: 71-487
Cow position: chr11:45646440-45646868 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 40

Conread position: 71-496
Cow position: chr11:11125821-11125376 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 77

Conread position: 72-303
Cow position: chr11:31410728-31410963 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 176
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 115, 36

Conread position: 72-397
Cow position: chr11:30830466-30830791 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 36

Conread position: 72-451
Cow position: chr11:26143942-26144326 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 267
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 116, 50

Conread position: 73-380
Cow position: chr11:56187758-56187464 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 222
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 206, 38

Conread position: 76-621
Cow position: chr11:46580507-46579936 (view UCSC Genome Browser custom track)
Alignm length: 581
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 58

Conread position: 77-262
Cow position: chr11:71022146-71021967 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 132
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 112, 21

Conread position: 77-399
Cow position: chr11:15339207-15338896 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 224
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 109, 46

Conread position: 77-728
Cow position: chr11:3393067-3393726 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 492
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 31

Conread position: 79-391
Cow position: chr11:17493628-17493314 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 237
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 76, 18

Conread position: 79-397
Cow position: chr11:63909510-63909833 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 224
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 45, 136

Conread position: 79-501
Cow position: chr11:7247747-7248168 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 292
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 109, 35

Conread position: 79-595
Cow position: chr11:68206701-68207231 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 29

Conread position: 79-716
Cow position: chr11:26067040-26067684 (view UCSC Genome Browser custom track)
Alignm length: 657
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 15

Conread position: 80-399
Cow position: chr11:23586784-23586460 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 225
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 108, 12

Conread position: 82-461
Cow position: chr11:18706687-18707065 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 265
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 106, 21

Conread position: 83-284
Cow position: chr11:48248067-48248271 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 140
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 46, 0

Conread position: 100-718
Cow position: chr11:44234483-44233870 (view UCSC Genome Browser custom track)
Alignm length: 643
Alignm identity: 458
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 40

Conread position: 101-522
Cow position: chr11:73353936-73354370 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 291
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 87, 15

Conread position: 104-385
Cow position: chr11:65607565-65607851 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 196
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 84, 10

Conread position: 104-501
Cow position: chr11:8988108-8988521 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 288
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 83, 51

Conread position: 104-550
Cow position: chr11:22977749-22978201 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 311
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 14, 44

Conread position: 104-621
Cow position: chr11:59873051-59872517 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 28

Conread position: 104-655
Cow position: chr11:41303-40739 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 36

Conread position: 107-528
Cow position: chr11:66424759-66425192 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 290
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 81, 39

Conread position: 107-586
Cow position: chr11:2092462-2091973 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 113

Conread position: 107-625
Cow position: chr11:28644210-28643676 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 215

Conread position: 107-714
Cow position: chr11:952392-951770 (view UCSC Genome Browser custom track)
Alignm length: 638
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 43

Conread position: 107-728
Cow position: chr11:59702612-59701968 (view UCSC Genome Browser custom track)
Alignm length: 653
Alignm identity: 466
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 31

Conread position: 108-594
Cow position: chr11:20602346-20601857 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 30

Conread position: 108-728
Cow position: chr11:76114760-76114137 (view UCSC Genome Browser custom track)
Alignm length: 639
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 15

Conread position: 111-258
Cow position: chr11:79018942-79019088 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 110
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 77, 29

Conread position: 111-305
Cow position: chr11:35803251-35803052 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 152
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 75, 11

Conread position: 111-399
Cow position: chr11:26845478-26845758 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 217
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 77, 26

Conread position: 111-399
Cow position: chr11:83687315-83687605 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 203
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 47, 56

Conread position: 112-384
Cow position: chr11:36238896-36238624 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 191
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 9, 93

Conread position: 112-399
Cow position: chr11:61958629-61958920 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 206
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 74, 36

Conread position: 112-459
Cow position: chr11:4662930-4663289 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 234
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 76, 40

Conread position: 112-542
Cow position: chr11:73924445-73924889 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 26

Conread position: 112-566
Cow position: chr11:35684384-35684853 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 26

Conread position: 112-703
Cow position: chr11:76369403-76370010 (view UCSC Genome Browser custom track)
Alignm length: 617
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 29

Conread position: 112-728
Cow position: chr11:48272318-48271683 (view UCSC Genome Browser custom track)
Alignm length: 646
Alignm identity: 472
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 210

Conread position: 113-378
Cow position: chr11:69076025-69075755 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 197
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 73, 27

Conread position: 113-418
Cow position: chr11:30955117-30954798 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 207

Conread position: 113-467
Cow position: chr11:77128775-77128411 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 246
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 75, 18

Conread position: 113-528
Cow position: chr11:53553334-53552941 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 50

Conread position: 113-709
Cow position: chr11:67747394-67746786 (view UCSC Genome Browser custom track)
Alignm length: 626
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 24

Conread position: 113-728
Cow position: chr11:25387186-25386555 (view UCSC Genome Browser custom track)
Alignm length: 636
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 212

Conread position: 116-496
Cow position: chr11:83230289-83230671 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 269
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 72, 22

Conread position: 116-522
Cow position: chr11:70609912-70609478 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 292
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 15, 80

Conread position: 116-678
Cow position: chr11:69119406-69118832 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 22

Conread position: 116-710
Cow position: chr11:7590302-7589698 (view UCSC Genome Browser custom track)
Alignm length: 619
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 93

Conread position: 116-717
Cow position: chr11:73512333-73512927 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 10

Conread position: 117-282
Cow position: chr11:20205741-20205905 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 118
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 70, 23

Conread position: 117-399
Cow position: chr11:33348077-33348363 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 205
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 72, 29

Conread position: 117-472
Cow position: chr11:31228075-31227732 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 254
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 71, 154

Conread position: 117-511
Cow position: chr11:48496480-48496868 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 207

Conread position: 117-714
Cow position: chr11:62150783-62151381 (view UCSC Genome Browser custom track)
Alignm length: 615
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 23

Conread position: 117-728
Cow position: chr11:44036832-44036200 (view UCSC Genome Browser custom track)
Alignm length: 642
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 92

Conread position: 118-384
Cow position: chr11:2575792-2576063 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 187
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 70, 170

Conread position: 118-387
Cow position: chr11:51729398-51729126 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 189
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 69, 201

Conread position: 118-472
Cow position: chr11:70836267-70836630 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 254
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 68, 19

Conread position: 119-399
Cow position: chr11:2925192-2925465 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 202
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 264, 30

Conread position: 119-646
Cow position: chr11:26483817-26483302 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 37

Conread position: 120-621
Cow position: chr11:43898248-43897726 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 114

Conread position: 120-707
Cow position: chr11:29946805-29947427 (view UCSC Genome Browser custom track)
Alignm length: 636
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 18

Conread position: 122-384
Cow position: chr11:71390458-71390723 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 193
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 142, 56

Conread position: 122-444
Cow position: chr11:71501026-71501357 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 225
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 66, 16

Conread position: 122-658
Cow position: chr11:44636649-44637207 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 16

Conread position: 123-475
Cow position: chr11:36799203-36799561 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 242
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 67, 25

Conread position: 124-399
Cow position: chr11:5569-5293 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 194
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 64, 193

Conread position: 124-484
Cow position: chr11:45631662-45632039 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 258
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 65, 22

Conread position: 125-280
Cow position: chr11:36328931-36329086 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 115
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 63, 18

Conread position: 125-463
Cow position: chr11:16342124-16342495 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 255

Conread position: 127-496
Cow position: chr11:77118800-77118430 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 243
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 61, 21

Conread position: 128-474
Cow position: chr11:47545236-47544863 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 270
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 21, 86

Conread position: 128-523
Cow position: chr11:30934516-30934106 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 281
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 59, 18

Conread position: 130-717
Cow position: chr11:23128442-23129051 (view UCSC Genome Browser custom track)
Alignm length: 619
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 16

Conread position: 131-677
Cow position: chr11:58588444-58587871 (view UCSC Genome Browser custom track)
Alignm length: 579
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 59

Conread position: 132-322
Cow position: chr11:24599291-24599487 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 143
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 137, 29

Conread position: 132-349
Cow position: chr11:6194302-6194081 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 157
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 56, 20

Conread position: 132-360
Cow position: chr11:46953045-46952814 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 160
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 55, 139

Conread position: 132-374
Cow position: chr11:86720322-86720561 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 167
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 56, 16

Conread position: 132-399
Cow position: chr11:17661181-17660917 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 196
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 56, 77

Conread position: 132-509
Cow position: chr11:8147801-8148191 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 277
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 56, 187

Conread position: 132-584
Cow position: chr11:30355157-30354690 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 307
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 10, 189

Conread position: 133-737
Cow position: chr11:10213472-10214076 (view UCSC Genome Browser custom track)
Alignm length: 632
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 44

Conread position: 138-404
Cow position: chr11:67550284-67550554 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 187
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 12, 182

Conread position: 141-304
Cow position: chr11:28168334-28168505 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 124
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 47, 0

Conread position: 141-390
Cow position: chr11:55494768-55494514 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 185
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 47, 174

Conread position: 141-453
Cow position: chr11:47899357-47899033 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 239
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 46, 121

Conread position: 141-486
Cow position: chr11:33341056-33341422 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 182

Conread position: 141-575
Cow position: chr11:35873914-35874337 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 67

Conread position: 141-594
Cow position: chr11:80819916-80820381 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 63

Conread position: 141-732
Cow position: chr11:63469964-63469367 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 173

Conread position: 144-483
Cow position: chr11:11232370-11232728 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 64

Conread position: 148-366
Cow position: chr11:65767281-65767056 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 156
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 39, 173

Conread position: 148-481
Cow position: chr11:50778449-50778098 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 104

Conread position: 148-487
Cow position: chr11:55761950-55761602 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 231
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 41, 169

Conread position: 148-569
Cow position: chr11:64090015-64090443 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 122

Conread position: 148-605
Cow position: chr11:44642210-44642674 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 13

Conread position: 148-662
Cow position: chr11:64638444-64638964 (view UCSC Genome Browser custom track)
Alignm length: 537
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 72

Conread position: 148-731
Cow position: chr11:67246867-67246287 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 54

Conread position: 149-470
Cow position: chr11:71806070-71806381 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 215
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 39, 55

Conread position: 150-629
Cow position: chr11:8428591-8428067 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 170

Conread position: 152-385
Cow position: chr11:75874677-75874912 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 160
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 36, 165

Conread position: 154-330
Cow position: chr11:69392637-69392452 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 139
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 34, 7

Conread position: 160-667
Cow position: chr11:46413642-46413109 (view UCSC Genome Browser custom track)
Alignm length: 540
Alignm identity: 346
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 123, 90

Conread position: 165-314
Cow position: chr11:54218779-54218626 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 116
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 22, 0

Conread position: 167-728
Cow position: chr11:42359177-42358614 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 154

Conread position: 170-404
Cow position: chr11:67207788-67207561 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 158
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 192, 75

Conread position: 170-660
Cow position: chr11:3704342-3703872 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 38

Conread position: 172-480
Cow position: chr11:24937723-24937392 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 149

Conread position: 172-480
Cow position: chr11:40258354-40258668 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 214
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 15, 39

Conread position: 172-481
Cow position: chr11:50951614-50951279 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 237
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 78, 150

Conread position: 172-487
Cow position: chr11:1668727-1668397 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 230
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 78, 86

Conread position: 172-748
Cow position: chr11:63508471-63507904 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 79

Conread position: 174-487
Cow position: chr11:10620272-10620603 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 253
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 12, 140

Conread position: 174-645
Cow position: chr11:65409098-65409597 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 51

Conread position: 178-398
Cow position: chr11:63434006-63434232 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 157
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 10, 140

Conread position: 178-479
Cow position: chr11:45897998-45898325 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 230
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 10, 143

Conread position: 178-483
Cow position: chr11:30911952-30912265 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 234
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 201, 6

Conread position: 178-588
Cow position: chr11:62490490-62490058 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 148

Conread position: 178-626
Cow position: chr11:44575693-44576151 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 134

Conread position: 181-707
Cow position: chr11:8339359-8339900 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 11

Conread position: 185-388
Cow position: chr11:80756737-80756947 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 151
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 84, 135

Conread position: 185-471
Cow position: chr11:30597037-30596735 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 214
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 77, 141

Conread position: 185-517
Cow position: chr11:30120618-30120970 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 259
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 69, 34

Conread position: 185-573
Cow position: chr11:82796245-82796637 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 262
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 85, 125

Conread position: 185-603
Cow position: chr11:3833319-3833739 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 23

Conread position: 185-641
Cow position: chr11:61427638-61427187 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 86

Conread position: 185-715
Cow position: chr11:39115537-39114999 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 20

Conread position: 186-696
Cow position: chr11:33293736-33294273 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 376

Conread position: 196-399
Cow position: chr11:18591401-18591605 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 155
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 87, 122

Conread position: 196-617
Cow position: chr11:27386306-27386745 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 126

Conread position: 196-656
Cow position: chr11:65431087-65430631 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 79

Conread position: 197-397
Cow position: chr11:8936463-8936660 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 153
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 46, 11

Conread position: 197-728
Cow position: chr11:10076800-10076258 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 113

Conread position: 198-523
Cow position: chr11:60301930-60302271 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 236
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 56, 47

Conread position: 199-555
Cow position: chr11:955397-955021 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 120

Conread position: 200-717
Cow position: chr11:42792944-42793464 (view UCSC Genome Browser custom track)
Alignm length: 541
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 119

Conread position: 209-371
Cow position: chr11:33824868-33825037 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 128
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 52, 113

Conread position: 210-408
Cow position: chr11:75918352-75918159 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 149
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 78, 59

Conread position: 210-717
Cow position: chr11:16251225-16251760 (view UCSC Genome Browser custom track)
Alignm length: 540
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 112

Conread position: 213-607
Cow position: chr11:81174900-81174495 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 16

Conread position: 214-399
Cow position: chr11:32610017-32609825 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 138
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 18, 103

Conread position: 216-716
Cow position: chr11:50197420-50197937 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 345

Conread position: 216-728
Cow position: chr11:37068304-37068811 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 40

Conread position: 217-633
Cow position: chr11:4412010-4412441 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 69

Conread position: 219-576
Cow position: chr11:73478618-73478259 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 241
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 168, 51

Conread position: 219-608
Cow position: chr11:7333710-7334111 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 286
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 31, 102

Conread position: 219-728
Cow position: chr11:19788135-19787633 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 38

Conread position: 219-728
Cow position: chr11:42232618-42232080 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 103

Conread position: 223-484
Cow position: chr11:36496850-36496580 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 200
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 27, 98

Conread position: 225-487
Cow position: chr11:77208046-77207771 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 205
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 25, 32

Conread position: 229-549
Cow position: chr11:59155877-59156212 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 239
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 31, 75

Conread position: 229-717
Cow position: chr11:67950972-67951454 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 49

Conread position: 230-380
Cow position: chr11:70740978-70741131 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 123
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 18, 88

Conread position: 233-485
Cow position: chr11:62016285-62016545 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 175
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 154, 79

Conread position: 233-595
Cow position: chr11:47586354-47586730 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 75

Conread position: 233-715
Cow position: chr11:41577024-41577509 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 247-399
Cow position: chr11:47851008-47850849 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 125
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 33, 0

Conread position: 259-718
Cow position: chr11:8232601-8233074 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 50

Conread position: 269-487
Cow position: chr11:19508249-19508019 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 5

Conread position: 272-717
Cow position: chr11:21819492-21819961 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 44

Conread position: 273-496
Cow position: chr11:25165393-25165159 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 180
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 114, 41

Conread position: 274-453
Cow position: chr11:15016992-15016802 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 141
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 9, 41

Conread position: 277-485
Cow position: chr11:62155574-62155355 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 168
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 85, 191

Conread position: 277-487
Cow position: chr11:75748380-75748158 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 162
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 85, 37

Conread position: 277-532
Cow position: chr11:9837153-9837423 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 194
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 85, 37

Conread position: 277-539
Cow position: chr11:43914160-43913895 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 199
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 85, 37

Conread position: 279-580
Cow position: chr11:64932355-64932666 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 229
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 19, 27

Conread position: 279-604
Cow position: chr11:24967399-24967074 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 237
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 108, 35

Conread position: 283-471
Cow position: chr11:80825104-80824907 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 154
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 59, 33

Conread position: 294-489
Cow position: chr11:48232663-48232463 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 152
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 68, 21

Conread position: 297-566
Cow position: chr11:82232342-82232069 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 196
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 82, 19

Conread position: 299-714
Cow position: chr11:79019598-79020035 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 15

Conread position: 306-487
Cow position: chr11:73977314-73977501 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 135
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 80, 8

Conread position: 308-506
Cow position: chr11:85384566-85384372 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 146
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 76, 15

Conread position: 312-728
Cow position: chr11:84775021-84774595 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 24

Conread position: 314-708
Cow position: chr11:48428994-48428592 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 277
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 75, 276

Conread position: 319-696
Cow position: chr11:47125467-47125080 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 270
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 43, 186

Conread position: 320-705
Cow position: chr11:35252086-35252480 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 266
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 15, 35

Conread position: 323-717
Cow position: chr11:10294493-10294091 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 154

Conread position: 334-590
Cow position: chr11:46592212-46591951 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 187
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 50, 137

Show alignments to all cow chromosomes.