Cow genome map

Conread name: Spl1-SPL01E050073

Conread position: 3-339
Cow position: chr13:13195990-13196323 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 239
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 16, 27

Conread position: 21-621
Cow position: chr13:20821071-20820462 (view UCSC Genome Browser custom track)
Alignm length: 625
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 87

Conread position: 22-249
Cow position: chr13:13283105-13283335 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 157
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 40, 49

Conread position: 22-547
Cow position: chr13:9142043-9142584 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 47

Conread position: 23-563
Cow position: chr13:26480435-26479899 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 42

Conread position: 29-259
Cow position: chr13:8450107-8450328 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 163
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 33, 80

Conread position: 34-279
Cow position: chr13:47243775-47243537 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 170
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 7, 26

Conread position: 34-490
Cow position: chr13:37069117-37069596 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 331
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 17, 99

Conread position: 34-523
Cow position: chr13:18851867-18852352 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 75

Conread position: 34-711
Cow position: chr13:34263592-34262917 (view UCSC Genome Browser custom track)
Alignm length: 695
Alignm identity: 505
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 17

Conread position: 35-238
Cow position: chr13:26422816-26423028 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 150
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 7, 0

Conread position: 35-276
Cow position: chr13:3209562-3209306 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 182
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 26, 44

Conread position: 35-326
Cow position: chr13:10220737-10221020 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 192
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 31, 81

Conread position: 35-337
Cow position: chr13:21170308-21170611 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 223
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 23, 74

Conread position: 35-385
Cow position: chr13:25579417-25579059 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 240
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 6, 77

Conread position: 35-385
Cow position: chr13:28552366-28552724 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 239
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 29, 87

Conread position: 35-399
Cow position: chr13:17569317-17568954 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 267
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 27, 41

Conread position: 35-399
Cow position: chr13:49503758-49503387 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 255
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 27, 72

Conread position: 35-399
Cow position: chr13:54389240-54388876 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 40

Conread position: 35-443
Cow position: chr13:52749683-52749288 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 282
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 27, 57

Conread position: 35-475
Cow position: chr13:47964392-47963969 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 307
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 151, 73

Conread position: 35-483
Cow position: chr13:19610784-19610339 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 304
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 27, 80

Conread position: 35-490
Cow position: chr13:17971263-17970788 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 202

Conread position: 35-493
Cow position: chr13:23961027-23960556 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 39

Conread position: 35-495
Cow position: chr13:57002503-57002991 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 332
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 27, 19

Conread position: 35-559
Cow position: chr13:13088812-13089336 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 74

Conread position: 35-608
Cow position: chr13:17159102-17158501 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 68

Conread position: 35-656
Cow position: chr13:44278126-44278763 (view UCSC Genome Browser custom track)
Alignm length: 650
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 29

Conread position: 35-688
Cow position: chr13:47007933-47007295 (view UCSC Genome Browser custom track)
Alignm length: 666
Alignm identity: 480
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 74

Conread position: 35-711
Cow position: chr13:6616983-6616282 (view UCSC Genome Browser custom track)
Alignm length: 711
Alignm identity: 490
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 88

Conread position: 35-717
Cow position: chr13:13260771-13261485 (view UCSC Genome Browser custom track)
Alignm length: 727
Alignm identity: 516
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 81

Conread position: 35-717
Cow position: chr13:20684371-20683654 (view UCSC Genome Browser custom track)
Alignm length: 726
Alignm identity: 516
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 306

Conread position: 35-717
Cow position: chr13:45352807-45353502 (view UCSC Genome Browser custom track)
Alignm length: 721
Alignm identity: 485
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 86

Conread position: 35-728
Cow position: chr13:12045566-12044858 (view UCSC Genome Browser custom track)
Alignm length: 730
Alignm identity: 487
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 73

Conread position: 36-283
Cow position: chr13:21981189-21980954 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 169
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 27, 66

Conread position: 36-311
Cow position: chr13:11103427-11103136 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 201
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 27, 0

Conread position: 36-360
Cow position: chr13:16038502-16038191 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 211
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 15, 88

Conread position: 36-385
Cow position: chr13:12201321-12200959 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 237
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 26, 19

Conread position: 36-397
Cow position: chr13:20360057-20360413 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 245
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 119, 86

Conread position: 36-398
Cow position: chr13:49023085-49022730 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 239
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 20, 72

Conread position: 36-498
Cow position: chr13:32282908-32283382 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 318
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 152, 18

Conread position: 36-498
Cow position: chr13:52893930-52894397 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 323
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 26, 18

Conread position: 36-588
Cow position: chr13:2773897-2774461 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 18

Conread position: 36-604
Cow position: chr13:21275637-21276215 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 53

Conread position: 36-678
Cow position: chr13:34261016-34261687 (view UCSC Genome Browser custom track)
Alignm length: 688
Alignm identity: 470
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 68

Conread position: 36-695
Cow position: chr13:16247426-16248106 (view UCSC Genome Browser custom track)
Alignm length: 696
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 71

Conread position: 36-719
Cow position: chr13:52057343-52058003 (view UCSC Genome Browser custom track)
Alignm length: 696
Alignm identity: 489
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 12

Conread position: 37-285
Cow position: chr13:55494741-55494501 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 180
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 19, 43

Conread position: 37-301
Cow position: chr13:20534680-20534939 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 191
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 12, 38

Conread position: 38-276
Cow position: chr13:1462508-1462282 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 168
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 24, 16

Conread position: 38-325
Cow position: chr13:6860958-6861250 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 196
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 28, 96

Conread position: 38-485
Cow position: chr13:17114599-17114138 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 102

Conread position: 38-486
Cow position: chr13:55674426-55673962 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 73

Conread position: 38-490
Cow position: chr13:57475634-57475171 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 315
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 24, 150

Conread position: 38-498
Cow position: chr13:21288302-21287835 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 17

Conread position: 39-282
Cow position: chr13:45439316-45439541 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 176
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 23, 70

Conread position: 39-375
Cow position: chr13:21136128-21135782 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 74

Conread position: 39-465
Cow position: chr13:45074119-45073713 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 299
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 25, 70

Conread position: 40-289
Cow position: chr13:37621594-37621332 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 187
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 16, 184

Conread position: 40-305
Cow position: chr13:17611766-17611501 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 197
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 22, 69

Conread position: 40-325
Cow position: chr13:52881099-52880815 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 207
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 10, 15

Conread position: 40-380
Cow position: chr13:60375703-60375365 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 226
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 22, 69

Conread position: 40-384
Cow position: chr13:17821473-17821141 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 248
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 25, 72

Conread position: 40-399
Cow position: chr13:26742910-26743268 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 239
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 26, 107

Conread position: 40-474
Cow position: chr13:20497427-20497883 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 302
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 22, 68

Conread position: 40-496
Cow position: chr13:26262006-26261541 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 66

Conread position: 40-545
Cow position: chr13:25817314-25817813 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 81

Conread position: 40-576
Cow position: chr13:46525644-46525110 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 69

Conread position: 40-728
Cow position: chr13:34281466-34282166 (view UCSC Genome Browser custom track)
Alignm length: 718
Alignm identity: 520
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 61

Conread position: 45-260
Cow position: chr13:6926302-6926516 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 147
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 20, 62

Conread position: 45-462
Cow position: chr13:17004810-17004373 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 291
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 22, 116

Conread position: 45-487
Cow position: chr13:11808372-11808786 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 31

Conread position: 50-284
Cow position: chr13:15083455-15083682 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 171
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 6, 73

Conread position: 52-600
Cow position: chr13:15289121-15288578 (view UCSC Genome Browser custom track)
Alignm length: 577
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 63

Conread position: 58-443
Cow position: chr13:24230013-24230413 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 278
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 128, 66

Conread position: 58-483
Cow position: chr13:44322696-44323143 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 113

Conread position: 58-728
Cow position: chr13:21235864-21235207 (view UCSC Genome Browser custom track)
Alignm length: 691
Alignm identity: 506
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 59

Conread position: 60-321
Cow position: chr13:15239705-15239456 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 190
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 203, 51

Conread position: 60-398
Cow position: chr13:38548392-38548724 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 232
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 74, 8

Conread position: 60-406
Cow position: chr13:5060544-5060895 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 231
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 42, 112

Conread position: 60-551
Cow position: chr13:14927067-14927543 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 40

Conread position: 60-728
Cow position: chr13:20174544-20175221 (view UCSC Genome Browser custom track)
Alignm length: 690
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 55

Conread position: 61-219
Cow position: chr13:28081523-28081680 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 120
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 125, 82

Conread position: 61-229
Cow position: chr13:16525421-16525255 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 120
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 70, 0

Conread position: 61-241
Cow position: chr13:52913683-52913853 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 132
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 125, 47

Conread position: 61-247
Cow position: chr13:33854874-33854698 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 146
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 126, 11

Conread position: 61-248
Cow position: chr13:53850627-53850811 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 140
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 125, 50

Conread position: 61-259
Cow position: chr13:37614391-37614192 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 150
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 127, 50

Conread position: 61-260
Cow position: chr13:13775446-13775244 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 140
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 52, 103

Conread position: 61-269
Cow position: chr13:16908020-16908225 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 142
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 125, 50

Conread position: 61-282
Cow position: chr13:35557304-35557090 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 168
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 127, 50

Conread position: 61-283
Cow position: chr13:28440726-28440516 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 157
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 127, 11

Conread position: 61-284
Cow position: chr13:38035646-38035858 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 154
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 126, 63

Conread position: 61-305
Cow position: chr13:21171765-21171523 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 177
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 127, 30

Conread position: 61-321
Cow position: chr13:20314818-20314555 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 199
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 20, 49

Conread position: 61-325
Cow position: chr13:15756923-15757188 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 187
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 211, 64

Conread position: 61-327
Cow position: chr13:18197801-18197535 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 195
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 125, 38

Conread position: 61-342
Cow position: chr13:52477838-52477561 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 200
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 211, 47

Conread position: 61-356
Cow position: chr13:36876872-36877150 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 210
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 128, 52

Conread position: 61-360
Cow position: chr13:54128791-54128491 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 206
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 128, 32

Conread position: 61-362
Cow position: chr13:12974622-12974907 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 212
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 19, 40

Conread position: 61-376
Cow position: chr13:19278902-19279209 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 25

Conread position: 61-381
Cow position: chr13:20288145-20288454 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 47

Conread position: 61-384
Cow position: chr13:14576022-14576334 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 221
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 127, 58

Conread position: 61-384
Cow position: chr13:47186037-47186351 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 226
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 19, 48

Conread position: 61-385
Cow position: chr13:39233020-39232704 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 220
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 85, 60

Conread position: 61-386
Cow position: chr13:20217591-20217259 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 41

Conread position: 61-386
Cow position: chr13:59170451-59170787 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 215
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 52, 186

Conread position: 61-387
Cow position: chr13:61188335-61188663 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 212
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 127, 61

Conread position: 61-388
Cow position: chr13:6663949-6663620 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 226
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 129, 60

Conread position: 61-395
Cow position: chr13:21280694-21280348 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 230
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 92, 47

Conread position: 61-396
Cow position: chr13:20261527-20261183 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 234
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 90, 46

Conread position: 61-396
Cow position: chr13:48165616-48165283 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 250
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 127, 12

Conread position: 61-399
Cow position: chr13:8374954-8374627 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 249
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 129, 49

Conread position: 61-399
Cow position: chr13:17021918-17021584 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 50

Conread position: 61-399
Cow position: chr13:18696630-18696987 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 116

Conread position: 61-399
Cow position: chr13:19223458-19223790 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 228
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 127, 61

Conread position: 61-399
Cow position: chr13:54582681-54583022 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 243
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 127, 50

Conread position: 61-428
Cow position: chr13:5671779-5671416 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 49

Conread position: 61-450
Cow position: chr13:48597716-48598111 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 275
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 125, 63

Conread position: 61-459
Cow position: chr13:37803686-37804095 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 289
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 72, 208

Conread position: 61-464
Cow position: chr13:5263472-5263065 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 282
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 127, 47

Conread position: 61-466
Cow position: chr13:7059265-7059698 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 292
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 90, 46

Conread position: 61-467
Cow position: chr13:15193081-15192670 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 286
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 127, 44

Conread position: 61-470
Cow position: chr13:51015377-51014954 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 287
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 85, 72

Conread position: 61-472
Cow position: chr13:43479868-43480290 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 48

Conread position: 61-474
Cow position: chr13:19033362-19033778 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 287
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 120, 62

Conread position: 61-481
Cow position: chr13:24585855-24586285 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 52

Conread position: 61-483
Cow position: chr13:43595298-43594876 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 295
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 214, 14

Conread position: 61-485
Cow position: chr13:7076047-7076498 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 312
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 48, 186

Conread position: 61-487
Cow position: chr13:14063714-14063284 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 55

Conread position: 61-487
Cow position: chr13:20881114-20880682 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 312
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 132, 47

Conread position: 61-487
Cow position: chr13:21242269-21241848 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 47

Conread position: 61-487
Cow position: chr13:45023416-45022964 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 154

Conread position: 61-490
Cow position: chr13:17745065-17745485 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 308
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 216, 47

Conread position: 61-493
Cow position: chr13:35659561-35660003 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 43

Conread position: 61-493
Cow position: chr13:42200427-42200868 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 47

Conread position: 61-497
Cow position: chr13:8194903-8195335 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 293
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 123, 46

Conread position: 61-497
Cow position: chr13:20784401-20784842 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 47

Conread position: 61-498
Cow position: chr13:15041668-15041217 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 54

Conread position: 61-498
Cow position: chr13:18166539-18166985 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 46

Conread position: 61-508
Cow position: chr13:54701988-54702455 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 18

Conread position: 61-531
Cow position: chr13:19393103-19393571 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 14

Conread position: 61-544
Cow position: chr13:38873150-38872676 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 321
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 46, 153

Conread position: 61-563
Cow position: chr13:17292321-17291816 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 77

Conread position: 61-564
Cow position: chr13:27525452-27524943 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 11

Conread position: 61-570
Cow position: chr13:2883864-2884375 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 351
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 93, 60

Conread position: 61-579
Cow position: chr13:11260084-11260584 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 47

Conread position: 61-583
Cow position: chr13:6189793-6189293 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 50

Conread position: 61-618
Cow position: chr13:30798517-30799095 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 108

Conread position: 61-628
Cow position: chr13:38329425-38330014 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 47

Conread position: 61-636
Cow position: chr13:52283715-52284298 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 46

Conread position: 61-662
Cow position: chr13:12670645-12670038 (view UCSC Genome Browser custom track)
Alignm length: 633
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 24

Conread position: 61-668
Cow position: chr13:20893837-20893217 (view UCSC Genome Browser custom track)
Alignm length: 633
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 40

Conread position: 61-675
Cow position: chr13:15162829-15162243 (view UCSC Genome Browser custom track)
Alignm length: 624
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 50

Conread position: 61-696
Cow position: chr13:9906535-9907186 (view UCSC Genome Browser custom track)
Alignm length: 666
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 46

Conread position: 61-714
Cow position: chr13:6973969-6974639 (view UCSC Genome Browser custom track)
Alignm length: 684
Alignm identity: 473
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 50

Conread position: 61-714
Cow position: chr13:57770176-57769556 (view UCSC Genome Browser custom track)
Alignm length: 664
Alignm identity: 458
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 46

Conread position: 61-717
Cow position: chr13:19883227-19882575 (view UCSC Genome Browser custom track)
Alignm length: 680
Alignm identity: 498
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 53

Conread position: 61-728
Cow position: chr13:311239-311915 (view UCSC Genome Browser custom track)
Alignm length: 690
Alignm identity: 473
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 45

Conread position: 62-399
Cow position: chr13:18058439-18058104 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 45

Conread position: 62-616
Cow position: chr13:13320605-13321147 (view UCSC Genome Browser custom track)
Alignm length: 572
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 46

Conread position: 62-705
Cow position: chr13:25926596-25927271 (view UCSC Genome Browser custom track)
Alignm length: 685
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 60

Conread position: 62-721
Cow position: chr13:972089-971419 (view UCSC Genome Browser custom track)
Alignm length: 682
Alignm identity: 517
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 49

Conread position: 63-399
Cow position: chr13:55583003-55583340 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 232
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 121, 59

Conread position: 63-456
Cow position: chr13:19022073-19022491 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 84

Conread position: 64-717
Cow position: chr13:21106953-21107609 (view UCSC Genome Browser custom track)
Alignm length: 677
Alignm identity: 476
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 66

Conread position: 64-728
Cow position: chr13:61977148-61976484 (view UCSC Genome Browser custom track)
Alignm length: 683
Alignm identity: 501
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 107

Conread position: 65-405
Cow position: chr13:13954585-13954235 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 229
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 123, 57

Conread position: 65-717
Cow position: chr13:41806587-41807225 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 495
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 16

Conread position: 66-457
Cow position: chr13:15257557-15257164 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 267
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 210, 53

Conread position: 66-717
Cow position: chr13:1155895-1155237 (view UCSC Genome Browser custom track)
Alignm length: 674
Alignm identity: 469
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 35

Conread position: 67-496
Cow position: chr13:15349442-15349017 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 289
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 48, 100

Conread position: 68-399
Cow position: chr13:1363504-1363839 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 224
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 84, 39

Conread position: 70-566
Cow position: chr13:44201825-44202311 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 36

Conread position: 70-717
Cow position: chr13:60509308-60508651 (view UCSC Genome Browser custom track)
Alignm length: 674
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 45

Conread position: 71-360
Cow position: chr13:46329789-46329501 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 214
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 117, 34

Conread position: 71-632
Cow position: chr13:46515873-46516449 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 57

Conread position: 71-717
Cow position: chr13:51528624-51527975 (view UCSC Genome Browser custom track)
Alignm length: 670
Alignm identity: 492
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 20

Conread position: 77-385
Cow position: chr13:49204829-49205104 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 215
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 111, 19

Conread position: 77-495
Cow position: chr13:23478851-23479281 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 43

Conread position: 77-603
Cow position: chr13:151788-152301 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 55

Conread position: 77-658
Cow position: chr13:35526376-35525800 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 42

Conread position: 77-710
Cow position: chr13:20666563-20665926 (view UCSC Genome Browser custom track)
Alignm length: 661
Alignm identity: 502
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 31

Conread position: 79-493
Cow position: chr13:25547761-25547343 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 284
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 50, 27

Conread position: 86-457
Cow position: chr13:53195450-53195078 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 261
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 103, 36

Conread position: 88-487
Cow position: chr13:9246565-9246958 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 268
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 99, 24

Conread position: 96-492
Cow position: chr13:11096015-11096417 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 280
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 20, 72

Conread position: 98-405
Cow position: chr13:5758501-5758192 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 222
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 90, 32

Conread position: 99-368
Cow position: chr13:19320369-19320646 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 194
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 91, 224

Conread position: 100-399
Cow position: chr13:5082487-5082795 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 218
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 36, 113

Conread position: 100-654
Cow position: chr13:56155311-56154756 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 38

Conread position: 103-468
Cow position: chr13:20839408-20839793 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 260
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 85, 11

Conread position: 104-463
Cow position: chr13:18491440-18491814 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 255
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 41, 54

Conread position: 104-475
Cow position: chr13:24369426-24369817 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 10

Conread position: 104-717
Cow position: chr13:38284137-38283511 (view UCSC Genome Browser custom track)
Alignm length: 633
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 168

Conread position: 106-350
Cow position: chr13:50751212-50750961 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 172
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 47, 55

Conread position: 106-483
Cow position: chr13:13176493-13176889 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 267
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 21, 13

Conread position: 107-505
Cow position: chr13:23856058-23856474 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 39

Conread position: 108-678
Cow position: chr13:60430227-60429649 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 34

Conread position: 110-523
Cow position: chr13:51822024-51821608 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 287
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 78, 28

Conread position: 111-364
Cow position: chr13:55727751-55728006 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 170
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 47, 55

Conread position: 111-556
Cow position: chr13:56148372-56148851 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 323
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 84, 38

Conread position: 111-621
Cow position: chr13:6087041-6086525 (view UCSC Genome Browser custom track)
Alignm length: 531
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 35

Conread position: 112-385
Cow position: chr13:14771304-14771585 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 188
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 76, 59

Conread position: 112-388
Cow position: chr13:6389246-6389511 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 191
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 15, 36

Conread position: 112-462
Cow position: chr13:18172188-18172559 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 27

Conread position: 112-470
Cow position: chr13:17439916-17439539 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 28

Conread position: 112-488
Cow position: chr13:20679189-20679594 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 207

Conread position: 112-694
Cow position: chr13:36771569-36770973 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 35

Conread position: 112-728
Cow position: chr13:17799927-17800556 (view UCSC Genome Browser custom track)
Alignm length: 643
Alignm identity: 458
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 79

Conread position: 112-731
Cow position: chr13:2413881-2414510 (view UCSC Genome Browser custom track)
Alignm length: 637
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 30

Conread position: 113-486
Cow position: chr13:20706352-20705960 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 27

Conread position: 113-717
Cow position: chr13:40943094-40943715 (view UCSC Genome Browser custom track)
Alignm length: 632
Alignm identity: 466
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 63

Conread position: 113-717
Cow position: chr13:51940583-51941206 (view UCSC Genome Browser custom track)
Alignm length: 630
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 211

Conread position: 114-404
Cow position: chr13:49520971-49520676 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 199
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 29, 53

Conread position: 114-693
Cow position: chr13:24753743-24754338 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 18

Conread position: 115-397
Cow position: chr13:11381871-11381579 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 212
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 13, 78

Conread position: 116-362
Cow position: chr13:8355062-8355302 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 171
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 73, 6

Conread position: 116-387
Cow position: chr13:51116169-51115898 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 182
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 72, 22

Conread position: 116-610
Cow position: chr13:1043106-1042589 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 24

Conread position: 117-357
Cow position: chr13:50568549-50568317 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 167
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 21, 0

Conread position: 117-399
Cow position: chr13:26698644-26698352 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 212
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 25, 97

Conread position: 117-479
Cow position: chr13:55316342-55315953 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 209

Conread position: 117-490
Cow position: chr13:53573826-53574204 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 262
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 71, 15

Conread position: 118-467
Cow position: chr13:37818897-37818536 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 258
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 33, 81

Conread position: 121-480
Cow position: chr13:43185021-43184635 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 268
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 67, 40

Conread position: 123-360
Cow position: chr13:47022227-47022462 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 175
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 58, 18

Conread position: 123-399
Cow position: chr13:20473822-20473546 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 207
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 10, 197

Conread position: 123-518
Cow position: chr13:6079550-6079144 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 278
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 65, 16

Conread position: 123-607
Cow position: chr13:53566464-53566946 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 20

Conread position: 123-656
Cow position: chr13:56686296-56686842 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 15

Conread position: 123-717
Cow position: chr13:12989710-12990316 (view UCSC Genome Browser custom track)
Alignm length: 615
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 149

Conread position: 125-490
Cow position: chr13:11460495-11460870 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 151

Conread position: 125-719
Cow position: chr13:43762034-43762637 (view UCSC Genome Browser custom track)
Alignm length: 621
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 15

Conread position: 127-717
Cow position: chr13:10929123-10928521 (view UCSC Genome Browser custom track)
Alignm length: 618
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 82

Conread position: 128-482
Cow position: chr13:48037491-48037859 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 12

Conread position: 128-603
Cow position: chr13:11820465-11820935 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 44

Conread position: 129-711
Cow position: chr13:31813742-31814325 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 136

Conread position: 130-717
Cow position: chr13:28683229-28683824 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 186

Conread position: 133-717
Cow position: chr13:25435252-25434653 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 190

Conread position: 134-484
Cow position: chr13:15885148-15884773 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 269
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 54, 12

Conread position: 134-594
Cow position: chr13:21176447-21175974 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 33

Conread position: 134-729
Cow position: chr13:37484408-37483780 (view UCSC Genome Browser custom track)
Alignm length: 634
Alignm identity: 462
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 187

Conread position: 141-376
Cow position: chr13:15194856-15194613 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 184
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 47, 183

Conread position: 141-465
Cow position: chr13:9593385-9593727 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 241
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 47, 24

Conread position: 141-470
Cow position: chr13:12202241-12202591 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 247
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 46, 184

Conread position: 141-621
Cow position: chr13:18835083-18835562 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 76

Conread position: 141-717
Cow position: chr13:57494310-57493712 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 76

Conread position: 144-585
Cow position: chr13:6153902-6153439 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 102

Conread position: 147-399
Cow position: chr13:15529152-15528887 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 193
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 35, 180

Conread position: 148-362
Cow position: chr13:7265234-7265020 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 157
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 40, 77

Conread position: 148-399
Cow position: chr13:15110200-15110465 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 181
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 38, 178

Conread position: 148-399
Cow position: chr13:15902910-15903161 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 186
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 40, 165

Conread position: 148-400
Cow position: chr13:17966324-17966063 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 194
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 15, 173

Conread position: 148-481
Cow position: chr13:6061122-6060770 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 249
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 38, 160

Conread position: 148-705
Cow position: chr13:7663536-7662973 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 169

Conread position: 148-710
Cow position: chr13:22085860-22085294 (view UCSC Genome Browser custom track)
Alignm length: 579
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 173

Conread position: 148-721
Cow position: chr13:15166704-15167294 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 61

Conread position: 149-344
Cow position: chr13:48862208-48862009 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 149
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 39, 60

Conread position: 149-496
Cow position: chr13:54094697-54095057 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 240
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 6, 19

Conread position: 150-375
Cow position: chr13:34555940-34555714 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 156
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 38, 89

Conread position: 154-487
Cow position: chr13:8524724-8524377 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 257
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 34, 9

Conread position: 160-520
Cow position: chr13:18243760-18244131 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 115

Conread position: 163-387
Cow position: chr13:62518429-62518202 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 166
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 25, 140

Conread position: 163-490
Cow position: chr13:8201582-8201238 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 243
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 25, 74

Conread position: 163-717
Cow position: chr13:47356552-47357086 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 48

Conread position: 164-387
Cow position: chr13:15144464-15144242 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 164
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 23, 159

Conread position: 165-399
Cow position: chr13:8652539-8652293 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 175
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 23, 81

Conread position: 165-667
Cow position: chr13:25531887-25531368 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 63

Conread position: 166-504
Cow position: chr13:15233830-15234171 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 143

Conread position: 166-577
Cow position: chr13:17622192-17622616 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 128

Conread position: 167-474
Cow position: chr13:11955212-11954883 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 234
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 20, 203

Conread position: 172-485
Cow position: chr13:20180324-20180639 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 221
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 87, 149

Conread position: 173-487
Cow position: chr13:54344691-54345021 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 235
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 15, 32

Conread position: 178-382
Cow position: chr13:2803388-2803594 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 149
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 11, 141

Conread position: 178-705
Cow position: chr13:25062329-25062878 (view UCSC Genome Browser custom track)
Alignm length: 557
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 34

Conread position: 185-464
Cow position: chr13:60329683-60329971 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 193
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 68, 13

Conread position: 185-483
Cow position: chr13:20466361-20466055 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 208
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 73, 53

Conread position: 185-717
Cow position: chr13:890245-889702 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 40

Conread position: 185-728
Cow position: chr13:46324865-46324308 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 130

Conread position: 186-468
Cow position: chr13:37795383-37795660 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 208
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 201, 69

Conread position: 188-399
Cow position: chr13:12619188-12618968 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 161
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 86, 133

Conread position: 189-403
Cow position: chr13:17346738-17346954 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 153
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 73, 19

Conread position: 189-486
Cow position: chr13:24376421-24376733 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 233
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 80, 134

Conread position: 189-508
Cow position: chr13:55295698-55295361 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 24

Conread position: 189-704
Cow position: chr13:41253549-41254085 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 131

Conread position: 198-463
Cow position: chr13:26151035-26150771 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 184
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 31, 100

Conread position: 199-392
Cow position: chr13:10099050-10098853 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 151
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 63, 97

Conread position: 202-546
Cow position: chr13:30693655-30694003 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 243
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 75, 114

Conread position: 205-399
Cow position: chr13:28652747-28652944 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 154
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 56, 19

Conread position: 210-393
Cow position: chr13:32826509-32826318 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 140
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 64, 111

Conread position: 210-711
Cow position: chr13:20440632-20440134 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 106

Conread position: 211-490
Cow position: chr13:46312068-46311789 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 193
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 165, 61

Conread position: 213-479
Cow position: chr13:17815730-17816007 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 199
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 174, 57

Conread position: 213-588
Cow position: chr13:13265759-13266144 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 13

Conread position: 216-492
Cow position: chr13:37521421-37521131 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 207
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 60, 100

Conread position: 216-717
Cow position: chr13:52922050-52922573 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 100

Conread position: 220-463
Cow position: chr13:48372946-48372718 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 172
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 168, 53

Conread position: 223-689
Cow position: chr13:12682584-12682097 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 90

Conread position: 224-657
Cow position: chr13:18215407-18215842 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 42

Conread position: 228-486
Cow position: chr13:41155067-41154803 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 187
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 49, 94

Conread position: 230-735
Cow position: chr13:3701408-3701923 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 5

Conread position: 236-470
Cow position: chr13:20536477-20536727 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 179
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 12, 65

Conread position: 247-496
Cow position: chr13:21209853-21210115 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 195
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 140, 23

Conread position: 247-717
Cow position: chr13:24060343-24059859 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 26

Conread position: 260-547
Cow position: chr13:34113528-34113229 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 211
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 101, 53

Conread position: 267-495
Cow position: chr13:5713311-5713546 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 164
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 12, 5

Conread position: 271-711
Cow position: chr13:19426681-19426232 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 41

Conread position: 272-710
Cow position: chr13:37517121-37516675 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 42

Conread position: 274-606
Cow position: chr13:43629759-43629402 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 251
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 67, 40

Conread position: 275-556
Cow position: chr13:55843496-55843795 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 219
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 5, 41

Conread position: 277-696
Cow position: chr13:47312941-47313348 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 39

Conread position: 277-717
Cow position: chr13:19178295-19178753 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 37

Conread position: 288-509
Cow position: chr13:21904695-21904923 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 171
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 68, 26

Conread position: 327-709
Cow position: chr13:26098214-26098606 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 145

Conread position: 341-493
Cow position: chr13:29122752-29122593 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 125
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 49, 149

Conread position: 357-711
Cow position: chr13:21989006-21988640 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 167

Conread position: 402-717
Cow position: chr13:21135570-21135251 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 46

Show alignments to all cow chromosomes.