Cow genome map
| Conread name: | Spl1-SPL01E050073 |
| Conread position: | 7-387 |
| Cow position: | chr18:39624006-39623621 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 263 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 16, 54 |
| Conread position: | 10-732 |
| Cow position: | chr18:26939171-26938453 (view UCSC Genome Browser custom track) |
| Alignm length: | 751 |
| Alignm identity: | 518 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 68 |
| Conread position: | 17-517 |
| Cow position: | chr18:4884327-4884836 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 9 |
| Conread position: | 21-728 |
| Cow position: | chr18:55782247-55782956 (view UCSC Genome Browser custom track) |
| Alignm length: | 731 |
| Alignm identity: | 505 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 167, 78 |
| Conread position: | 30-377 |
| Cow position: | chr18:55710206-55709863 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 231 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 16, 80 |
| Conread position: | 34-280 |
| Cow position: | chr18:51383226-51383462 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 28, 11 |
| Conread position: | 34-493 |
| Cow position: | chr18:10905021-10904549 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 75 |
| Conread position: | 34-728 |
| Cow position: | chr18:37023363-37024088 (view UCSC Genome Browser custom track) |
| Alignm length: | 731 |
| Alignm identity: | 487 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 296 |
| Conread position: | 35-237 |
| Cow position: | chr18:50004533-50004726 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 27, 74 |
| Conread position: | 35-241 |
| Cow position: | chr18:49602869-49603071 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 27, 82 |
| Conread position: | 35-242 |
| Cow position: | chr18:34444564-34444762 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 27, 67 |
| Conread position: | 35-248 |
| Cow position: | chr18:41724638-41724853 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 21, 15 |
| Conread position: | 35-265 |
| Cow position: | chr18:44917927-44917705 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 162 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 27, 58 |
| Conread position: | 35-280 |
| Cow position: | chr18:6470265-6470028 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 167 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 27, 74 |
| Conread position: | 35-282 |
| Cow position: | chr18:9040530-9040777 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 27, 79 |
| Conread position: | 35-305 |
| Cow position: | chr18:8949627-8949890 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 186 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 151, 12 |
| Conread position: | 35-323 |
| Cow position: | chr18:51178540-51178830 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 200 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 27, 230 |
| Conread position: | 35-350 |
| Cow position: | chr18:10214014-10214336 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 218 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 23, 71 |
| Conread position: | 35-384 |
| Cow position: | chr18:45453880-45453532 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 235 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 30, 19 |
| Conread position: | 35-405 |
| Cow position: | chr18:42431439-42431805 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 264 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 21, 14 |
| Conread position: | 35-410 |
| Cow position: | chr18:7109305-7108926 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 262 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 27, 92 |
| Conread position: | 35-490 |
| Cow position: | chr18:9558139-9557687 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 324 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 27, 54 |
| Conread position: | 35-570 |
| Cow position: | chr18:45104258-45104819 (view UCSC Genome Browser custom track) |
| Alignm length: | 573 |
| Alignm identity: | 389 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 23 |
| Conread position: | 35-717 |
| Cow position: | chr18:20641329-20641997 (view UCSC Genome Browser custom track) |
| Alignm length: | 695 |
| Alignm identity: | 482 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 67 |
| Conread position: | 35-717 |
| Cow position: | chr18:22789917-22790586 (view UCSC Genome Browser custom track) |
| Alignm length: | 692 |
| Alignm identity: | 493 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 74 |
| Conread position: | 35-728 |
| Cow position: | chr18:12117680-12118374 (view UCSC Genome Browser custom track) |
| Alignm length: | 719 |
| Alignm identity: | 508 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 74 |
| Conread position: | 35-728 |
| Cow position: | chr18:16227733-16227037 (view UCSC Genome Browser custom track) |
| Alignm length: | 722 |
| Alignm identity: | 484 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 73 |
| Conread position: | 36-385 |
| Cow position: | chr18:18369180-18369538 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 246 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 91, 18 |
| Conread position: | 36-398 |
| Cow position: | chr18:8170919-8171273 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 256 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 26, 73 |
| Conread position: | 37-291 |
| Cow position: | chr18:14225565-14225314 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 179 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 13, 75 |
| Conread position: | 38-399 |
| Cow position: | chr18:1954406-1954778 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 63 |
| Conread position: | 38-486 |
| Cow position: | chr18:42479409-42479870 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 105 |
| Conread position: | 39-487 |
| Cow position: | chr18:18918794-18919244 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 63 |
| Conread position: | 40-311 |
| Cow position: | chr18:53039017-53038724 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 202 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 40-385 |
| Cow position: | chr18:7414866-7415204 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 234 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 22, 82 |
| Conread position: | 40-399 |
| Cow position: | chr18:1399184-1399544 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 247 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 24, 86 |
| Conread position: | 40-485 |
| Cow position: | chr18:10891679-10891238 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 317 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 23, 44 |
| Conread position: | 40-566 |
| Cow position: | chr18:10954632-10954114 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 366 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 22, 82 |
| Conread position: | 40-717 |
| Cow position: | chr18:11791090-11790425 (view UCSC Genome Browser custom track) |
| Alignm length: | 699 |
| Alignm identity: | 451 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 73 |
| Conread position: | 41-717 |
| Cow position: | chr18:31672351-31673027 (view UCSC Genome Browser custom track) |
| Alignm length: | 701 |
| Alignm identity: | 480 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 67 |
| Conread position: | 43-268 |
| Cow position: | chr18:52649174-52649402 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 162 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 50-490 |
| Cow position: | chr18:55788836-55789286 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 309 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 109, 69 |
| Conread position: | 54-716 |
| Cow position: | chr18:28657762-28658426 (view UCSC Genome Browser custom track) |
| Alignm length: | 686 |
| Alignm identity: | 495 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 14 |
| Conread position: | 58-379 |
| Cow position: | chr18:24266254-24266582 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 220 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 131, 69 |
| Conread position: | 60-399 |
| Cow position: | chr18:18961685-18962029 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 234 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 121, 51 |
| Conread position: | 61-217 |
| Cow position: | chr18:49440989-49440837 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 116 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 125, 64 |
| Conread position: | 61-245 |
| Cow position: | chr18:28322799-28322625 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 123, 41 |
| Conread position: | 61-253 |
| Cow position: | chr18:11672199-11672003 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 43, 138 |
| Conread position: | 61-259 |
| Cow position: | chr18:50632299-50632488 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 127, 42 |
| Conread position: | 61-268 |
| Cow position: | chr18:2773241-2773447 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 146 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 125, 50 |
| Conread position: | 61-268 |
| Cow position: | chr18:2776744-2776950 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 81, 50 |
| Conread position: | 61-284 |
| Cow position: | chr18:32252019-32252239 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 127, 20 |
| Conread position: | 61-284 |
| Cow position: | chr18:52251708-52251926 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 125, 54 |
| Conread position: | 61-305 |
| Cow position: | chr18:22568922-22569164 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 127, 27 |
| Conread position: | 61-312 |
| Cow position: | chr18:25598087-25598345 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 125, 47 |
| Conread position: | 61-319 |
| Cow position: | chr18:4626644-4626892 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 125, 47 |
| Conread position: | 61-321 |
| Cow position: | chr18:43796813-43797065 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 187 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 127, 41 |
| Conread position: | 61-323 |
| Cow position: | chr18:41950359-41950103 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 55, 7 |
| Conread position: | 61-330 |
| Cow position: | chr18:50959635-50959365 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 113, 46 |
| Conread position: | 61-344 |
| Cow position: | chr18:3085361-3085649 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 192 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 63, 217 |
| Conread position: | 61-350 |
| Cow position: | chr18:42751442-42751752 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 213 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 61-363 |
| Cow position: | chr18:50095263-50095547 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 217 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 163, 47 |
| Conread position: | 61-372 |
| Cow position: | chr18:19641120-19640817 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 217 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 114, 11 |
| Conread position: | 61-385 |
| Cow position: | chr18:32873741-32873418 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 217 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 90, 40 |
| Conread position: | 61-385 |
| Cow position: | chr18:43555367-43555700 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 225 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 58, 263 |
| Conread position: | 61-392 |
| Cow position: | chr18:55747834-55747501 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 221 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 149, 47 |
| Conread position: | 61-397 |
| Cow position: | chr18:48713688-48713359 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 245 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 127, 47 |
| Conread position: | 61-398 |
| Cow position: | chr18:3212026-3211680 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 240 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 87, 55 |
| Conread position: | 61-398 |
| Cow position: | chr18:55759321-55759667 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 230 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 125, 41 |
| Conread position: | 61-399 |
| Cow position: | chr18:178891-179219 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 228 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 127, 53 |
| Conread position: | 61-399 |
| Cow position: | chr18:247551-247871 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 227 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 125, 42 |
| Conread position: | 61-405 |
| Cow position: | chr18:52171012-52170681 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 225 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 85, 49 |
| Conread position: | 61-438 |
| Cow position: | chr18:17390844-17391216 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 47 |
| Conread position: | 61-448 |
| Cow position: | chr18:17649593-17649988 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 260 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 127, 46 |
| Conread position: | 61-456 |
| Cow position: | chr18:12023493-12023893 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 46 |
| Conread position: | 61-466 |
| Cow position: | chr18:33159089-33158693 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 66 |
| Conread position: | 61-466 |
| Cow position: | chr18:42431946-42432362 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 47 |
| Conread position: | 61-475 |
| Cow position: | chr18:17956231-17956654 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 279 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 123, 50 |
| Conread position: | 61-477 |
| Cow position: | chr18:11691260-11691691 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 64 |
| Conread position: | 61-479 |
| Cow position: | chr18:41024972-41025433 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 305 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 56, 280 |
| Conread position: | 61-485 |
| Cow position: | chr18:55499216-55498777 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 307 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 201, 41 |
| Conread position: | 61-486 |
| Cow position: | chr18:38985837-38985397 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 50 |
| Conread position: | 61-487 |
| Cow position: | chr18:15613718-15614135 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 47 |
| Conread position: | 61-494 |
| Cow position: | chr18:50382396-50381959 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 310 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 48, 72 |
| Conread position: | 61-495 |
| Cow position: | chr18:54572142-54572595 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 313 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 90, 46 |
| Conread position: | 61-497 |
| Cow position: | chr18:39875099-39875561 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 123 |
| Conread position: | 61-510 |
| Cow position: | chr18:12113222-12113682 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 318 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 127, 43 |
| Conread position: | 61-514 |
| Cow position: | chr18:3132627-3133060 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 62 |
| Conread position: | 61-528 |
| Cow position: | chr18:56181313-56181787 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 56 |
| Conread position: | 61-576 |
| Cow position: | chr18:12775635-12776151 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 48 |
| Conread position: | 61-591 |
| Cow position: | chr18:39662927-39662384 (view UCSC Genome Browser custom track) |
| Alignm length: | 554 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 41 |
| Conread position: | 61-592 |
| Cow position: | chr18:55505549-55505010 (view UCSC Genome Browser custom track) |
| Alignm length: | 558 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 22 |
| Conread position: | 61-617 |
| Cow position: | chr18:9010851-9010313 (view UCSC Genome Browser custom track) |
| Alignm length: | 563 |
| Alignm identity: | 415 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 42 |
| Conread position: | 61-620 |
| Cow position: | chr18:9029759-9029205 (view UCSC Genome Browser custom track) |
| Alignm length: | 583 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 46 |
| Conread position: | 61-649 |
| Cow position: | chr18:30359997-30360574 (view UCSC Genome Browser custom track) |
| Alignm length: | 595 |
| Alignm identity: | 439 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 55 |
| Conread position: | 61-667 |
| Cow position: | chr18:3158437-3159068 (view UCSC Genome Browser custom track) |
| Alignm length: | 640 |
| Alignm identity: | 430 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 269 |
| Conread position: | 61-667 |
| Cow position: | chr18:5189545-5190148 (view UCSC Genome Browser custom track) |
| Alignm length: | 621 |
| Alignm identity: | 436 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 33 |
| Conread position: | 61-687 |
| Cow position: | chr18:3180556-3179931 (view UCSC Genome Browser custom track) |
| Alignm length: | 643 |
| Alignm identity: | 432 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 55 |
| Conread position: | 61-706 |
| Cow position: | chr18:11184085-11183431 (view UCSC Genome Browser custom track) |
| Alignm length: | 673 |
| Alignm identity: | 476 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 64 |
| Conread position: | 61-707 |
| Cow position: | chr18:7952356-7951706 (view UCSC Genome Browser custom track) |
| Alignm length: | 676 |
| Alignm identity: | 466 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 132 |
| Conread position: | 61-714 |
| Cow position: | chr18:49655827-49655205 (view UCSC Genome Browser custom track) |
| Alignm length: | 668 |
| Alignm identity: | 449 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 46 |
| Conread position: | 61-717 |
| Cow position: | chr18:3417312-3416656 (view UCSC Genome Browser custom track) |
| Alignm length: | 678 |
| Alignm identity: | 459 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 67 |
| Conread position: | 61-717 |
| Cow position: | chr18:9366068-9365371 (view UCSC Genome Browser custom track) |
| Alignm length: | 705 |
| Alignm identity: | 511 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 64 |
| Conread position: | 61-717 |
| Cow position: | chr18:11779799-11779149 (view UCSC Genome Browser custom track) |
| Alignm length: | 672 |
| Alignm identity: | 467 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 64 |
| Conread position: | 61-717 |
| Cow position: | chr18:11867484-11866830 (view UCSC Genome Browser custom track) |
| Alignm length: | 680 |
| Alignm identity: | 472 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 131, 47 |
| Conread position: | 61-717 |
| Cow position: | chr18:29356487-29357158 (view UCSC Genome Browser custom track) |
| Alignm length: | 693 |
| Alignm identity: | 483 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 49 |
| Conread position: | 61-717 |
| Cow position: | chr18:43283610-43284268 (view UCSC Genome Browser custom track) |
| Alignm length: | 679 |
| Alignm identity: | 468 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 35 |
| Conread position: | 61-717 |
| Cow position: | chr18:45903750-45904416 (view UCSC Genome Browser custom track) |
| Alignm length: | 683 |
| Alignm identity: | 500 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 47 |
| Conread position: | 61-728 |
| Cow position: | chr18:37002783-37002105 (view UCSC Genome Browser custom track) |
| Alignm length: | 692 |
| Alignm identity: | 489 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 35 |
| Conread position: | 61-728 |
| Cow position: | chr18:42747744-42747046 (view UCSC Genome Browser custom track) |
| Alignm length: | 713 |
| Alignm identity: | 488 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 151 |
| Conread position: | 61-728 |
| Cow position: | chr18:44262769-44262085 (view UCSC Genome Browser custom track) |
| Alignm length: | 706 |
| Alignm identity: | 502 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 47 |
| Conread position: | 61-728 |
| Cow position: | chr18:55692964-55692281 (view UCSC Genome Browser custom track) |
| Alignm length: | 697 |
| Alignm identity: | 461 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 43 |
| Conread position: | 61-729 |
| Cow position: | chr18:9974184-9974856 (view UCSC Genome Browser custom track) |
| Alignm length: | 687 |
| Alignm identity: | 500 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 47 |
| Conread position: | 61-731 |
| Cow position: | chr18:43950974-43950307 (view UCSC Genome Browser custom track) |
| Alignm length: | 688 |
| Alignm identity: | 468 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 61 |
| Conread position: | 62-268 |
| Cow position: | chr18:22516391-22516589 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 148 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 125, 46 |
| Conread position: | 62-282 |
| Cow position: | chr18:38937965-38937755 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 157 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 126, 46 |
| Conread position: | 62-349 |
| Cow position: | chr18:25006361-25006628 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 200 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 126, 46 |
| Conread position: | 62-396 |
| Cow position: | chr18:15517029-15517351 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 222 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 268, 46 |
| Conread position: | 62-397 |
| Cow position: | chr18:12270657-12270325 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 225 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 56, 156 |
| Conread position: | 62-453 |
| Cow position: | chr18:22055717-22056111 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 268 |
| Conread position: | 62-463 |
| Cow position: | chr18:37381946-37382365 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 276 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 125, 49 |
| Conread position: | 62-482 |
| Cow position: | chr18:5578440-5578018 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 311 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 126, 46 |
| Conread position: | 62-656 |
| Cow position: | chr18:12242422-12241813 (view UCSC Genome Browser custom track) |
| Alignm length: | 630 |
| Alignm identity: | 442 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 28 |
| Conread position: | 62-661 |
| Cow position: | chr18:22120740-22121343 (view UCSC Genome Browser custom track) |
| Alignm length: | 618 |
| Alignm identity: | 427 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 14 |
| Conread position: | 62-728 |
| Cow position: | chr18:20126437-20125778 (view UCSC Genome Browser custom track) |
| Alignm length: | 693 |
| Alignm identity: | 503 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 46 |
| Conread position: | 62-733 |
| Cow position: | chr18:29648925-29648254 (view UCSC Genome Browser custom track) |
| Alignm length: | 694 |
| Alignm identity: | 476 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 44 |
| Conread position: | 63-338 |
| Cow position: | chr18:34834640-34834362 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 123, 62 |
| Conread position: | 63-717 |
| Cow position: | chr18:3193853-3193215 (view UCSC Genome Browser custom track) |
| Alignm length: | 664 |
| Alignm identity: | 447 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 44 |
| Conread position: | 63-728 |
| Cow position: | chr18:31082199-31082865 (view UCSC Genome Browser custom track) |
| Alignm length: | 691 |
| Alignm identity: | 483 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 44 |
| Conread position: | 63-729 |
| Cow position: | chr18:9066844-9066192 (view UCSC Genome Browser custom track) |
| Alignm length: | 678 |
| Alignm identity: | 459 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 45 |
| Conread position: | 64-496 |
| Cow position: | chr18:19143361-19143816 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 305 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 82, 39 |
| Conread position: | 65-574 |
| Cow position: | chr18:6310222-6309718 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 43 |
| Conread position: | 68-689 |
| Cow position: | chr18:28101769-28101135 (view UCSC Genome Browser custom track) |
| Alignm length: | 650 |
| Alignm identity: | 481 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 39 |
| Conread position: | 70-531 |
| Cow position: | chr18:55000600-55001070 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 144, 76 |
| Conread position: | 71-277 |
| Cow position: | chr18:35535011-35535209 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 147 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 115, 52 |
| Conread position: | 71-290 |
| Cow position: | chr18:47547843-47548064 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 41, 95 |
| Conread position: | 71-350 |
| Cow position: | chr18:49841422-49841138 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 212 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 62, 101 |
| Conread position: | 71-399 |
| Cow position: | chr18:10977076-10977399 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 243 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 119, 40 |
| Conread position: | 71-399 |
| Cow position: | chr18:33896275-33896615 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 260 |
| Conread position: | 71-621 |
| Cow position: | chr18:6881220-6881752 (view UCSC Genome Browser custom track) |
| Alignm length: | 558 |
| Alignm identity: | 406 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 39 |
| Conread position: | 71-726 |
| Cow position: | chr18:51405778-51406421 (view UCSC Genome Browser custom track) |
| Alignm length: | 674 |
| Alignm identity: | 474 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 190, 45 |
| Conread position: | 73-330 |
| Cow position: | chr18:52402826-52403092 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 103, 54 |
| Conread position: | 77-312 |
| Cow position: | chr18:35367072-35367290 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 172 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 87, 31 |
| Conread position: | 77-355 |
| Cow position: | chr18:49038589-49038316 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 208 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 111, 31 |
| Conread position: | 77-399 |
| Cow position: | chr18:3017954-3018267 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 228 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 56, 94 |
| Conread position: | 78-398 |
| Cow position: | chr18:8300154-8299822 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 65 |
| Conread position: | 78-559 |
| Cow position: | chr18:54973882-54974351 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 30 |
| Conread position: | 79-280 |
| Cow position: | chr18:52414102-52413898 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 79-523 |
| Cow position: | chr18:29958045-29958473 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 29 |
| Conread position: | 89-717 |
| Cow position: | chr18:7650104-7649474 (view UCSC Genome Browser custom track) |
| Alignm length: | 649 |
| Alignm identity: | 464 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 19 |
| Conread position: | 106-405 |
| Cow position: | chr18:47835932-47835631 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 80, 91 |
| Conread position: | 106-483 |
| Cow position: | chr18:21192307-21192697 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 267 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 18, 43 |
| Conread position: | 107-377 |
| Cow position: | chr18:48633884-48633625 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 38, 96 |
| Conread position: | 107-390 |
| Cow position: | chr18:36201521-36201806 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 205 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 24, 154 |
| Conread position: | 111-312 |
| Cow position: | chr18:49324335-49324527 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 149 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 14, 33 |
| Conread position: | 111-405 |
| Cow position: | chr18:45637313-45637590 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 201 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 77, 84 |
| Conread position: | 111-489 |
| Cow position: | chr18:28923748-28924125 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 29 |
| Conread position: | 111-490 |
| Cow position: | chr18:56184036-56183644 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 277 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 75, 35 |
| Conread position: | 111-573 |
| Cow position: | chr18:2849166-2849636 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 210 |
| Conread position: | 112-394 |
| Cow position: | chr18:51190491-51190778 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 31, 103 |
| Conread position: | 112-399 |
| Cow position: | chr18:33008168-33007868 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 208 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 76, 83 |
| Conread position: | 112-485 |
| Cow position: | chr18:5766515-5766140 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 102 |
| Conread position: | 112-496 |
| Cow position: | chr18:46727690-46727293 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 276 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 76, 44 |
| Conread position: | 112-509 |
| Cow position: | chr18:25647147-25647561 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 26 |
| Conread position: | 112-659 |
| Cow position: | chr18:15173114-15172584 (view UCSC Genome Browser custom track) |
| Alignm length: | 566 |
| Alignm identity: | 398 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 29 |
| Conread position: | 112-714 |
| Cow position: | chr18:19193265-19193861 (view UCSC Genome Browser custom track) |
| Alignm length: | 610 |
| Alignm identity: | 438 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 26 |
| Conread position: | 113-482 |
| Cow position: | chr18:36230628-36230997 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 24 |
| Conread position: | 115-385 |
| Cow position: | chr18:21740715-21740985 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 196 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 15, 160 |
| Conread position: | 116-399 |
| Cow position: | chr18:18592571-18592284 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 26 |
| Conread position: | 116-581 |
| Cow position: | chr18:15880740-15881237 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 427 |
| Conread position: | 116-728 |
| Cow position: | chr18:29058403-29059010 (view UCSC Genome Browser custom track) |
| Alignm length: | 636 |
| Alignm identity: | 450 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 87 |
| Conread position: | 117-399 |
| Cow position: | chr18:32883396-32883114 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 70, 29 |
| Conread position: | 117-405 |
| Cow position: | chr18:4495789-4496088 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 200 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 73, 200 |
| Conread position: | 117-409 |
| Cow position: | chr18:16686240-16686535 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 209 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 71, 15 |
| Conread position: | 117-553 |
| Cow position: | chr18:56159556-56159104 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 306 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 71, 26 |
| Conread position: | 117-574 |
| Cow position: | chr18:20174036-20174506 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 26 |
| Conread position: | 117-617 |
| Cow position: | chr18:38607316-38606817 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 19 |
| Conread position: | 117-625 |
| Cow position: | chr18:34526999-34527534 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 27 |
| Conread position: | 118-439 |
| Cow position: | chr18:52855152-52854822 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 213 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 7, 206 |
| Conread position: | 119-493 |
| Cow position: | chr18:30794519-30794136 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 272 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 44, 21 |
| Conread position: | 121-484 |
| Cow position: | chr18:25282462-25282843 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 265 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 67, 23 |
| Conread position: | 122-658 |
| Cow position: | chr18:38687170-38686642 (view UCSC Genome Browser custom track) |
| Alignm length: | 554 |
| Alignm identity: | 399 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 22 |
| Conread position: | 123-356 |
| Cow position: | chr18:54130241-54130480 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 58, 17 |
| Conread position: | 123-360 |
| Cow position: | chr18:7963518-7963294 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 168 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 145, 15 |
| Conread position: | 123-380 |
| Cow position: | chr18:30586136-30586390 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 63, 18 |
| Conread position: | 123-592 |
| Cow position: | chr18:14586379-14586870 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 43 |
| Conread position: | 123-678 |
| Cow position: | chr18:19849671-19850225 (view UCSC Genome Browser custom track) |
| Alignm length: | 572 |
| Alignm identity: | 399 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 23 |
| Conread position: | 123-705 |
| Cow position: | chr18:47512095-47511502 (view UCSC Genome Browser custom track) |
| Alignm length: | 615 |
| Alignm identity: | 428 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 23 |
| Conread position: | 123-717 |
| Cow position: | chr18:36459020-36458401 (view UCSC Genome Browser custom track) |
| Alignm length: | 629 |
| Alignm identity: | 446 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 25 |
| Conread position: | 125-717 |
| Cow position: | chr18:51443350-51443948 (view UCSC Genome Browser custom track) |
| Alignm length: | 620 |
| Alignm identity: | 406 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 99 |
| Conread position: | 126-404 |
| Cow position: | chr18:38344893-38344612 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 195 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 63, 13 |
| Conread position: | 127-717 |
| Cow position: | chr18:35012230-35012824 (view UCSC Genome Browser custom track) |
| Alignm length: | 607 |
| Alignm identity: | 419 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 176 |
| Conread position: | 128-342 |
| Cow position: | chr18:31711476-31711698 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 59, 20 |
| Conread position: | 128-742 |
| Cow position: | chr18:50082173-50082771 (view UCSC Genome Browser custom track) |
| Alignm length: | 628 |
| Alignm identity: | 454 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 12 |
| Conread position: | 129-523 |
| Cow position: | chr18:19620026-19619623 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 19 |
| Conread position: | 129-714 |
| Cow position: | chr18:55788006-55787415 (view UCSC Genome Browser custom track) |
| Alignm length: | 608 |
| Alignm identity: | 410 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 61 |
| Conread position: | 132-360 |
| Cow position: | chr18:51594722-51594952 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 56, 77 |
| Conread position: | 137-655 |
| Cow position: | chr18:45571089-45570571 (view UCSC Genome Browser custom track) |
| Alignm length: | 535 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 32 |
| Conread position: | 141-371 |
| Cow position: | chr18:11578147-11577927 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 172 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 48, 70 |
| Conread position: | 141-545 |
| Cow position: | chr18:49100295-49100717 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 179 |
| Conread position: | 141-717 |
| Cow position: | chr18:50637400-50637981 (view UCSC Genome Browser custom track) |
| Alignm length: | 598 |
| Alignm identity: | 424 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 245, 44 |
| Conread position: | 143-604 |
| Cow position: | chr18:55461638-55462114 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 26 |
| Conread position: | 144-328 |
| Cow position: | chr18:52406762-52406583 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 46, 60 |
| Conread position: | 147-515 |
| Cow position: | chr18:4381360-4380976 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 252 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 41, 22 |
| Conread position: | 148-395 |
| Cow position: | chr18:3370966-3370717 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 40, 62 |
| Conread position: | 148-490 |
| Cow position: | chr18:11685048-11684696 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 258 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 40, 172 |
| Conread position: | 148-630 |
| Cow position: | chr18:13507674-13508156 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 60 |
| Conread position: | 148-688 |
| Cow position: | chr18:4539816-4540362 (view UCSC Genome Browser custom track) |
| Alignm length: | 555 |
| Alignm identity: | 410 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 82 |
| Conread position: | 148-701 |
| Cow position: | chr18:51212249-51211664 (view UCSC Genome Browser custom track) |
| Alignm length: | 596 |
| Alignm identity: | 422 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 47 |
| Conread position: | 148-714 |
| Cow position: | chr18:33299970-33299392 (view UCSC Genome Browser custom track) |
| Alignm length: | 597 |
| Alignm identity: | 430 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 173 |
| Conread position: | 148-728 |
| Cow position: | chr18:47183227-47183820 (view UCSC Genome Browser custom track) |
| Alignm length: | 604 |
| Alignm identity: | 429 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 113 |
| Conread position: | 152-508 |
| Cow position: | chr18:44483711-44484070 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 165 |
| Conread position: | 152-621 |
| Cow position: | chr18:23766347-23766843 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 169 |
| Conread position: | 164-550 |
| Cow position: | chr18:25206137-25206547 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 279 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 9, 83 |
| Conread position: | 165-407 |
| Cow position: | chr18:21176236-21175990 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 172 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 24, 55 |
| Conread position: | 165-493 |
| Cow position: | chr18:13360103-13359765 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 243 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 21, 76 |
| Conread position: | 165-498 |
| Cow position: | chr18:15025721-15025375 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 237 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 23, 46 |
| Conread position: | 165-593 |
| Cow position: | chr18:29796379-29796828 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 304 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 23, 109 |
| Conread position: | 171-593 |
| Cow position: | chr18:5487285-5486856 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 38 |
| Conread position: | 172-728 |
| Cow position: | chr18:14815306-14815871 (view UCSC Genome Browser custom track) |
| Alignm length: | 580 |
| Alignm identity: | 413 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 37 |
| Conread position: | 173-554 |
| Cow position: | chr18:35797660-35797265 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 263 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 90, 43 |
| Conread position: | 178-708 |
| Cow position: | chr18:30248103-30248627 (view UCSC Genome Browser custom track) |
| Alignm length: | 550 |
| Alignm identity: | 391 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 31 |
| Conread position: | 187-399 |
| Cow position: | chr18:896056-895839 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 74, 43 |
| Conread position: | 190-579 |
| Cow position: | chr18:11832143-11831762 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 185, 112 |
| Conread position: | 190-728 |
| Cow position: | chr18:33407640-33407108 (view UCSC Genome Browser custom track) |
| Alignm length: | 564 |
| Alignm identity: | 399 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 130 |
| Conread position: | 196-399 |
| Cow position: | chr18:6103080-6103287 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 76, 120 |
| Conread position: | 200-399 |
| Cow position: | chr18:54056563-54056370 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 202-679 |
| Cow position: | chr18:35636335-35636828 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 118 |
| Conread position: | 203-605 |
| Cow position: | chr18:56361593-56362007 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 115 |
| Conread position: | 210-517 |
| Cow position: | chr18:44548909-44549225 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 230 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 61, 111 |
| Conread position: | 219-446 |
| Cow position: | chr18:21205358-21205116 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 59, 101 |
| Conread position: | 232-430 |
| Cow position: | chr18:15340463-15340674 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 30, 88 |
| Conread position: | 247-538 |
| Cow position: | chr18:8104983-8105283 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 7 |
| Conread position: | 255-592 |
| Cow position: | chr18:18340014-18340347 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 64 |
| Conread position: | 260-486 |
| Cow position: | chr18:16847644-16847408 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 175 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 27, 57 |
| Conread position: | 260-487 |
| Cow position: | chr18:52658361-52658129 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 29, 55 |
| Conread position: | 263-714 |
| Cow position: | chr18:29388164-29387721 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 11 |
| Conread position: | 268-493 |
| Cow position: | chr18:37702916-37703141 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 65, 45 |
| Conread position: | 268-589 |
| Cow position: | chr18:23447140-23447469 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 241 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 88, 46 |
| Conread position: | 271-485 |
| Cow position: | chr18:1586863-1587080 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 158 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 21, 44 |
| Conread position: | 272-728 |
| Cow position: | chr18:19159035-19159491 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 43 |
| Conread position: | 274-605 |
| Cow position: | chr18:17380500-17380182 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 248 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 93, 11 |
| Conread position: | 275-678 |
| Cow position: | chr18:56167985-56168397 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 39 |
| Conread position: | 276-715 |
| Cow position: | chr18:13293444-13292992 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 39 |
| Conread position: | 277-486 |
| Cow position: | chr18:54658242-54658011 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 280-487 |
| Cow position: | chr18:4529443-4529229 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 17, 38 |
| Conread position: | 287-595 |
| Cow position: | chr18:4624509-4624826 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 230 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 75, 20 |
| Conread position: | 288-714 |
| Cow position: | chr18:43463487-43463940 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 221 |
| Conread position: | 289-711 |
| Cow position: | chr18:29768836-29768395 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 187 |
| Conread position: | 296-502 |
| Cow position: | chr18:47930952-47931165 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 92, 18 |
| Conread position: | 313-585 |
| Cow position: | chr18:32244123-32244409 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 210 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 22, 233 |
| Conread position: | 327-486 |
| Cow position: | chr18:24048124-24047958 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 127 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 54, 25 |
| Conread position: | 338-515 |
| Cow position: | chr18:46135188-46135001 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 350-474 |
| Cow position: | chr18:7958129-7958001 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 357-571 |
| Cow position: | chr18:49660189-49660413 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 22, 190 |
Show alignments to all cow chromosomes.