Cow genome map

Conread name: Spl1-SPL01E050073

Conread position: 33-594
Cow position: chr24:42103545-42102981 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 22

Conread position: 34-397
Cow position: chr24:19187115-19186780 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 249
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 30, 75

Conread position: 34-523
Cow position: chr24:40301343-40300837 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 92

Conread position: 34-598
Cow position: chr24:3166002-3165433 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 78

Conread position: 34-728
Cow position: chr24:33098289-33099009 (view UCSC Genome Browser custom track)
Alignm length: 736
Alignm identity: 503
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 75

Conread position: 35-310
Cow position: chr24:27285006-27284727 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 205
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 15, 176

Conread position: 35-322
Cow position: chr24:230461-230172 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 210
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 152, 68

Conread position: 35-382
Cow position: chr24:18281454-18281800 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 236
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 17, 24

Conread position: 35-384
Cow position: chr24:16510154-16509804 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 241
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 7, 74

Conread position: 35-385
Cow position: chr24:19000224-18999880 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 237
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 27, 19

Conread position: 35-399
Cow position: chr24:34762077-34761713 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 242
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 26, 19

Conread position: 35-487
Cow position: chr24:30229655-30229183 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 314
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 27, 20

Conread position: 35-497
Cow position: chr24:21606495-21606932 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 306
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 27, 19

Conread position: 35-556
Cow position: chr24:34533318-34532773 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 363
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 27, 13

Conread position: 35-725
Cow position: chr24:31812365-31811668 (view UCSC Genome Browser custom track)
Alignm length: 721
Alignm identity: 513
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 10

Conread position: 35-728
Cow position: chr24:27906620-27905907 (view UCSC Genome Browser custom track)
Alignm length: 727
Alignm identity: 502
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 52

Conread position: 35-728
Cow position: chr24:32204605-32205325 (view UCSC Genome Browser custom track)
Alignm length: 727
Alignm identity: 487
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 15

Conread position: 36-244
Cow position: chr24:6887187-6886989 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 150
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 26, 73

Conread position: 36-249
Cow position: chr24:3412862-3412656 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 153
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 27, 78

Conread position: 36-399
Cow position: chr24:17284803-17285178 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 247
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 29, 18

Conread position: 36-400
Cow position: chr24:19801019-19800661 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 259
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 26, 18

Conread position: 36-498
Cow position: chr24:31159811-31159334 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 139

Conread position: 36-554
Cow position: chr24:43028146-43028680 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 96

Conread position: 36-661
Cow position: chr24:44987190-44987828 (view UCSC Genome Browser custom track)
Alignm length: 650
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 83

Conread position: 38-389
Cow position: chr24:35576357-35576706 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 240
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 23, 40

Conread position: 38-573
Cow position: chr24:15289006-15288490 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 74

Conread position: 40-555
Cow position: chr24:34742926-34742401 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 370
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 22, 36

Conread position: 40-627
Cow position: chr24:28496406-28497009 (view UCSC Genome Browser custom track)
Alignm length: 617
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 68

Conread position: 42-385
Cow position: chr24:18356881-18357220 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 31

Conread position: 56-481
Cow position: chr24:30313869-30314313 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 52

Conread position: 58-495
Cow position: chr24:17860104-17860542 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 54

Conread position: 61-253
Cow position: chr24:7757924-7757741 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 137
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 126, 47

Conread position: 61-259
Cow position: chr24:2992725-2992916 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 140
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 125, 54

Conread position: 61-275
Cow position: chr24:22133320-22133118 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 154
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 126, 16

Conread position: 61-284
Cow position: chr24:20364261-20364473 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 158
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 127, 33

Conread position: 61-285
Cow position: chr24:5360866-5360657 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 165
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 125, 47

Conread position: 61-287
Cow position: chr24:21834808-21835022 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 157
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 127, 47

Conread position: 61-292
Cow position: chr24:28510946-28510728 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 167
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 49, 0

Conread position: 61-303
Cow position: chr24:25122492-25122267 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 176
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 125, 47

Conread position: 61-312
Cow position: chr24:28043149-28042877 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 196
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 41, 0

Conread position: 61-312
Cow position: chr24:37823679-37823433 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 193
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 126, 47

Conread position: 61-344
Cow position: chr24:29561424-29561700 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 208
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 126, 16

Conread position: 61-344
Cow position: chr24:39523295-39523573 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 209
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 125, 47

Conread position: 61-350
Cow position: chr24:27713255-27713536 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 214
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 127, 45

Conread position: 61-360
Cow position: chr24:28234196-28233907 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 214
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 17, 44

Conread position: 61-381
Cow position: chr24:37038046-37037736 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 232
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 127, 60

Conread position: 61-392
Cow position: chr24:27630554-27630231 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 213
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 126, 46

Conread position: 61-398
Cow position: chr24:39143767-39143429 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 221
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 92, 50

Conread position: 61-399
Cow position: chr24:352449-352789 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 223
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 127, 55

Conread position: 61-399
Cow position: chr24:10499373-10499030 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 61

Conread position: 61-399
Cow position: chr24:22079618-22079280 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 235
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 90, 46

Conread position: 61-399
Cow position: chr24:22689418-22689766 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 232
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 73, 41

Conread position: 61-399
Cow position: chr24:25194421-25194086 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 224
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 127, 47

Conread position: 61-399
Cow position: chr24:27219933-27220275 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 236
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 90, 41

Conread position: 61-403
Cow position: chr24:7476195-7476541 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 238
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 88, 40

Conread position: 61-403
Cow position: chr24:41756005-41755676 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 235
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 126, 48

Conread position: 61-404
Cow position: chr24:29539775-29540095 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 250
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 125, 47

Conread position: 61-461
Cow position: chr24:20801190-20801590 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 271
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 73, 41

Conread position: 61-463
Cow position: chr24:27040205-27039779 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 282
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 125, 56

Conread position: 61-481
Cow position: chr24:17294040-17294464 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 286
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 127, 61

Conread position: 61-485
Cow position: chr24:43371398-43370966 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 47

Conread position: 61-487
Cow position: chr24:6102982-6102550 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 303
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 125, 30

Conread position: 61-487
Cow position: chr24:25884993-25885441 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 154

Conread position: 61-489
Cow position: chr24:16995033-16994610 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 295
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 125, 41

Conread position: 61-493
Cow position: chr24:1269932-1269515 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 47

Conread position: 61-528
Cow position: chr24:26928786-26929273 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 321
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 125, 54

Conread position: 61-567
Cow position: chr24:24490870-24491371 (view UCSC Genome Browser custom track)
Alignm length: 535
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 47

Conread position: 61-573
Cow position: chr24:39849737-39850244 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 47

Conread position: 61-574
Cow position: chr24:25321140-25320624 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 58

Conread position: 61-582
Cow position: chr24:39483618-39483100 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 47

Conread position: 61-584
Cow position: chr24:37650830-37650301 (view UCSC Genome Browser custom track)
Alignm length: 550
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 51

Conread position: 61-602
Cow position: chr24:2402222-2402773 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 25

Conread position: 61-608
Cow position: chr24:2675491-2674930 (view UCSC Genome Browser custom track)
Alignm length: 572
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 204

Conread position: 61-617
Cow position: chr24:30236027-30235467 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 50

Conread position: 61-655
Cow position: chr24:18484838-18485448 (view UCSC Genome Browser custom track)
Alignm length: 621
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 50

Conread position: 61-695
Cow position: chr24:18741410-18742059 (view UCSC Genome Browser custom track)
Alignm length: 655
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 256

Conread position: 61-706
Cow position: chr24:5142093-5141432 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 487
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 15

Conread position: 61-710
Cow position: chr24:11119449-11118783 (view UCSC Genome Browser custom track)
Alignm length: 682
Alignm identity: 473
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 213

Conread position: 61-711
Cow position: chr24:36173624-36174280 (view UCSC Genome Browser custom track)
Alignm length: 679
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 41

Conread position: 61-716
Cow position: chr24:32609804-32609129 (view UCSC Genome Browser custom track)
Alignm length: 689
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 46

Conread position: 61-717
Cow position: chr24:27844378-27845031 (view UCSC Genome Browser custom track)
Alignm length: 675
Alignm identity: 489
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 50

Conread position: 61-717
Cow position: chr24:28063105-28062437 (view UCSC Genome Browser custom track)
Alignm length: 688
Alignm identity: 491
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 46

Conread position: 61-717
Cow position: chr24:28303207-28303861 (view UCSC Genome Browser custom track)
Alignm length: 671
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 105

Conread position: 61-717
Cow position: chr24:38815129-38814462 (view UCSC Genome Browser custom track)
Alignm length: 680
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 56

Conread position: 61-717
Cow position: chr24:40130291-40129609 (view UCSC Genome Browser custom track)
Alignm length: 702
Alignm identity: 476
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 13

Conread position: 61-728
Cow position: chr24:11887308-11886642 (view UCSC Genome Browser custom track)
Alignm length: 694
Alignm identity: 501
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 14

Conread position: 61-728
Cow position: chr24:33372701-33372036 (view UCSC Genome Browser custom track)
Alignm length: 698
Alignm identity: 469
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 40

Conread position: 61-728
Cow position: chr24:33944561-33943880 (view UCSC Genome Browser custom track)
Alignm length: 696
Alignm identity: 476
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 86

Conread position: 61-729
Cow position: chr24:18374919-18374270 (view UCSC Genome Browser custom track)
Alignm length: 691
Alignm identity: 472
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 47

Conread position: 61-731
Cow position: chr24:35675686-35675031 (view UCSC Genome Browser custom track)
Alignm length: 692
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 55

Conread position: 62-311
Cow position: chr24:13948276-13948027 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 181
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 124, 19

Conread position: 62-429
Cow position: chr24:31036493-31036132 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 275
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 127, 58

Conread position: 62-470
Cow position: chr24:27607957-27608364 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 304
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 213, 46

Conread position: 63-495
Cow position: chr24:31816728-31816294 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 13

Conread position: 63-630
Cow position: chr24:3494034-3493472 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 48

Conread position: 63-725
Cow position: chr24:5651842-5652485 (view UCSC Genome Browser custom track)
Alignm length: 669
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 35

Conread position: 64-549
Cow position: chr24:38347828-38347336 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 335
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 208, 58

Conread position: 65-334
Cow position: chr24:37974832-37975097 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 200
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 13, 44

Conread position: 66-399
Cow position: chr24:16645168-16645510 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 228
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 89, 35

Conread position: 68-398
Cow position: chr24:28990710-28990386 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 236
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 120, 49

Conread position: 69-523
Cow position: chr24:29782311-29781843 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 321
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 119, 48

Conread position: 70-487
Cow position: chr24:20943306-20942894 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 279
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 201, 41

Conread position: 71-399
Cow position: chr24:6131739-6132057 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 243
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 116, 48

Conread position: 71-559
Cow position: chr24:15057532-15057038 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 55

Conread position: 71-696
Cow position: chr24:17104424-17105054 (view UCSC Genome Browser custom track)
Alignm length: 644
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 56

Conread position: 77-308
Cow position: chr24:27349033-27349271 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 174
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 111, 34

Conread position: 77-397
Cow position: chr24:31359457-31359144 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 234
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 111, 31

Conread position: 77-518
Cow position: chr24:17311085-17311523 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 31

Conread position: 77-579
Cow position: chr24:20874819-20874307 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 45

Conread position: 77-714
Cow position: chr24:18731964-18732619 (view UCSC Genome Browser custom track)
Alignm length: 679
Alignm identity: 482
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 34

Conread position: 79-399
Cow position: chr24:16089369-16089052 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 218
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 107, 59

Conread position: 79-399
Cow position: chr24:24457102-24457428 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 228
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 46, 234

Conread position: 79-618
Cow position: chr24:32054790-32054259 (view UCSC Genome Browser custom track)
Alignm length: 550
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 59

Conread position: 80-399
Cow position: chr24:17832684-17832994 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 218
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 107, 31

Conread position: 82-333
Cow position: chr24:43537097-43536838 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 178
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 36, 85

Conread position: 83-490
Cow position: chr24:27725878-27726290 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 42

Conread position: 85-385
Cow position: chr24:6912224-6912518 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 205
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 55, 208

Conread position: 85-637
Cow position: chr24:29181035-29180470 (view UCSC Genome Browser custom track)
Alignm length: 576
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 136

Conread position: 86-710
Cow position: chr24:19465785-19466434 (view UCSC Genome Browser custom track)
Alignm length: 663
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 28

Conread position: 100-258
Cow position: chr24:2588652-2588809 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 114
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 88, 40

Conread position: 104-696
Cow position: chr24:28553449-28554048 (view UCSC Genome Browser custom track)
Alignm length: 622
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 38

Conread position: 108-580
Cow position: chr24:14648246-14648701 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 40

Conread position: 111-385
Cow position: chr24:23186806-23187084 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 201
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 31, 212

Conread position: 111-585
Cow position: chr24:33153887-33153409 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 27

Conread position: 111-717
Cow position: chr24:39159438-39160052 (view UCSC Genome Browser custom track)
Alignm length: 629
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 53

Conread position: 112-343
Cow position: chr24:39791649-39791414 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 179
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 76, 31

Conread position: 112-399
Cow position: chr24:15373514-15373225 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 203
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 76, 34

Conread position: 112-399
Cow position: chr24:33465513-33465789 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 196
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 76, 43

Conread position: 112-478
Cow position: chr24:18390192-18390562 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 269
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 36, 99

Conread position: 112-659
Cow position: chr24:29673629-29673067 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 25

Conread position: 112-728
Cow position: chr24:27290980-27290355 (view UCSC Genome Browser custom track)
Alignm length: 639
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 36

Conread position: 113-550
Cow position: chr24:5754943-5754497 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 33

Conread position: 116-496
Cow position: chr24:18331825-18331444 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 30

Conread position: 117-728
Cow position: chr24:30483835-30484456 (view UCSC Genome Browser custom track)
Alignm length: 638
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 33

Conread position: 117-729
Cow position: chr24:18970399-18971026 (view UCSC Genome Browser custom track)
Alignm length: 637
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 206

Conread position: 121-728
Cow position: chr24:24250822-24250202 (view UCSC Genome Browser custom track)
Alignm length: 627
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 11

Conread position: 123-400
Cow position: chr24:32071059-32070781 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 204
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 65, 23

Conread position: 123-460
Cow position: chr24:43927233-43927577 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 241
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 8, 19

Conread position: 123-483
Cow position: chr24:27748743-27748375 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 258
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 8, 198

Conread position: 125-705
Cow position: chr24:15246545-15247119 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 182

Conread position: 127-482
Cow position: chr24:16268035-16268381 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 243
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 61, 19

Conread position: 132-542
Cow position: chr24:28319118-28319542 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 140

Conread position: 132-711
Cow position: chr24:34396088-34396646 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 119

Conread position: 135-495
Cow position: chr24:8886998-8886625 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 254
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 53, 185

Conread position: 141-467
Cow position: chr24:39227076-39226735 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 236
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 46, 68

Conread position: 146-457
Cow position: chr24:24755524-24755196 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 228
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 43, 177

Conread position: 148-373
Cow position: chr24:43967429-43967656 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 169
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 112, 30

Conread position: 148-385
Cow position: chr24:19736259-19736495 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 171
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 40, 172

Conread position: 148-486
Cow position: chr24:3430808-3430453 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 254
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 10, 15

Conread position: 148-632
Cow position: chr24:212062-211555 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 174

Conread position: 148-705
Cow position: chr24:201562-202132 (view UCSC Genome Browser custom track)
Alignm length: 580
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 61

Conread position: 148-711
Cow position: chr24:32369840-32370421 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 176

Conread position: 149-399
Cow position: chr24:30897464-30897722 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 189
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 38, 6

Conread position: 149-726
Cow position: chr24:31324358-31323769 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 20

Conread position: 165-709
Cow position: chr24:43432848-43432277 (view UCSC Genome Browser custom track)
Alignm length: 577
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 46

Conread position: 172-397
Cow position: chr24:16895386-16895618 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 158
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 16, 147

Conread position: 173-717
Cow position: chr24:6150073-6149522 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 129

Conread position: 178-405
Cow position: chr24:33221895-33222132 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 174
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 9, 145

Conread position: 184-505
Cow position: chr24:36404104-36404448 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 242
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 90, 137

Conread position: 185-467
Cow position: chr24:29389268-29388983 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 200
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 193, 85

Conread position: 186-517
Cow position: chr24:39841813-39842162 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 240
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 79, 14

Conread position: 186-717
Cow position: chr24:7001033-7001579 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 22

Conread position: 188-399
Cow position: chr24:6487950-6487739 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 166
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 84, 20

Conread position: 189-399
Cow position: chr24:39833482-39833696 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 166
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 93, 80

Conread position: 190-380
Cow position: chr24:26455874-26455677 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 143
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 67, 131

Conread position: 196-385
Cow position: chr24:17492324-17492148 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 139
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 17, 0

Conread position: 198-660
Cow position: chr24:27874619-27874152 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 72

Conread position: 208-518
Cow position: chr24:30178255-30177922 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 118

Conread position: 210-537
Cow position: chr24:39808147-39807823 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 226
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 52, 13

Conread position: 212-399
Cow position: chr24:42825488-42825678 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 137
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 77, 103

Conread position: 217-567
Cow position: chr24:634982-634629 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 245
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 162, 53

Conread position: 219-496
Cow position: chr24:35794732-35795033 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 220
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 59, 103

Conread position: 224-688
Cow position: chr24:16267770-16267289 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 46

Conread position: 228-575
Cow position: chr24:29028035-29027684 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 88

Conread position: 229-717
Cow position: chr24:17363655-17364161 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 83

Conread position: 230-453
Cow position: chr24:40673437-40673676 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 171
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 47, 92

Conread position: 233-718
Cow position: chr24:27719771-27720259 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 22

Conread position: 233-729
Cow position: chr24:24136872-24137374 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 51

Conread position: 235-487
Cow position: chr24:27941026-27941291 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 198
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 44, 80

Conread position: 246-399
Cow position: chr24:18695595-18695437 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 118
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 27, 73

Conread position: 247-481
Cow position: chr24:27968052-27967803 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 183
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 15, 72

Conread position: 260-410
Cow position: chr24:885730-885880 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 117
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 19, 12

Conread position: 263-711
Cow position: chr24:27270738-27270291 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 53

Conread position: 264-490
Cow position: chr24:14729350-14729123 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 172
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 88, 23

Conread position: 268-417
Cow position: chr24:17938710-17938563 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 117
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 46, 0

Conread position: 273-665
Cow position: chr24:38267136-38266728 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 275
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 7, 43

Conread position: 274-586
Cow position: chr24:27543534-27543856 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 231
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 107, 11

Conread position: 274-642
Cow position: chr24:3631451-3631081 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 12

Conread position: 276-487
Cow position: chr24:44702918-44702695 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 162
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 13, 21

Conread position: 280-545
Cow position: chr24:27465641-27465904 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 199
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 107, 13

Conread position: 280-657
Cow position: chr24:20969862-20970243 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 34

Conread position: 298-582
Cow position: chr24:20923505-20923226 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 212
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 100, 16

Conread position: 318-461
Cow position: chr24:31757798-31757938 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 110
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 16, 0

Conread position: 332-717
Cow position: chr24:40974886-40974484 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 328

Conread position: 342-667
Cow position: chr24:33730731-33730398 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 223
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 63, 142

Show alignments to all cow chromosomes.