• Home
• Research
• Resources
• Publications
• About
• People
• Events
• Jobs
• News
• Contact

Cow genome map

           
Conread name:
           
Spl1-SPL01E050073
        

               
Conread position:
               
11-261
               

               
Cow position:
               
chr25:20203133-20202896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
51, 7
               

               
Conread position:
               
11-717
               

               
Cow position:
               
chr25:14833444-14834150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
738
               

               
Alignm identity:
               
483
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 18
               

               
Conread position:
               
26-308
               

               
Cow position:
               
chr25:36073786-36074069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
16, 105
               

               
Conread position:
               
33-259
               

               
Cow position:
               
chr25:3744526-3744760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
11, 113
               

               
Conread position:
               
34-259
               

               
Cow position:
               
chr25:28667841-28668066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
22, 73
               

               
Conread position:
               
34-373
               

               
Cow position:
               
chr25:11051731-11051397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
22, 82
               

               
Conread position:
               
34-487
               

               
Cow position:
               
chr25:19679556-19679081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 77
               

               
Conread position:
               
34-559
               

               
Cow position:
               
chr25:26524171-26523648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 82
               

               
Conread position:
               
35-248
               

               
Cow position:
               
chr25:11060343-11060128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
21, 82
               

               
Conread position:
               
35-248
               

               
Cow position:
               
chr25:31657076-31657281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
27, 74
               

               
Conread position:
               
35-257
               

               
Cow position:
               
chr25:36872852-36873069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
123, 73
               

               
Conread position:
               
35-281
               

               
Cow position:
               
chr25:9025329-9025089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
9, 75
               

               
Conread position:
               
35-302
               

               
Cow position:
               
chr25:33555811-33555545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
27, 19
               

               
Conread position:
               
35-306
               

               
Cow position:
               
chr25:1840525-1840254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
27, 73
               

               
Conread position:
               
35-325
               

               
Cow position:
               
chr25:12305482-12305191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
152, 73
               

               
Conread position:
               
35-367
               

               
Cow position:
               
chr25:4489104-4488793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
12, 38
               

               
Conread position:
               
35-383
               

               
Cow position:
               
chr25:30619282-30618923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
35, 15
               

               
Conread position:
               
35-385
               

               
Cow position:
               
chr25:7750655-7750311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
21, 46
               

               
Conread position:
               
35-399
               

               
Cow position:
               
chr25:26136617-26136983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
27, 19
               

               
Conread position:
               
35-400
               

               
Cow position:
               
chr25:447953-448332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
19, 46
               

               
Conread position:
               
35-478
               

               
Cow position:
               
chr25:24669248-24669682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 74
               

               
Conread position:
               
35-649
               

               
Cow position:
               
chr25:2415005-2414412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
631
               

               
Alignm identity:
               
439
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 78
               

               
Conread position:
               
35-695
               

               
Cow position:
               
chr25:18720924-18721550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
681
               

               
Alignm identity:
               
468
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 73
               

               
Conread position:
               
35-714
               

               
Cow position:
               
chr25:8120984-8120291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
708
               

               
Alignm identity:
               
500
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 80
               

               
Conread position:
               
35-717
               

               
Cow position:
               
chr25:11957008-11956340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
691
               

               
Alignm identity:
               
452
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 74
               

               
Conread position:
               
36-388
               

               
Cow position:
               
chr25:12609545-12609197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
26, 18
               

               
Conread position:
               
36-657
               

               
Cow position:
               
chr25:7217022-7216393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
651
               

               
Alignm identity:
               
454
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 12
               

               
Conread position:
               
36-716
               

               
Cow position:
               
chr25:10407209-10407906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
711
               

               
Alignm identity:
               
482
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 18
               

               
Conread position:
               
36-728
               

               
Cow position:
               
chr25:3992986-3992290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
724
               

               
Alignm identity:
               
523
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 76
               

               
Conread position:
               
38-350
               

               
Cow position:
               
chr25:1823891-1824205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
84, 109
               

               
Conread position:
               
40-385
               

               
Cow position:
               
chr25:21668447-21668101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 75
               

               
Conread position:
               
40-387
               

               
Cow position:
               
chr25:13272768-13272426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
10, 15
               

               
Conread position:
               
40-449
               

               
Cow position:
               
chr25:7008123-7007693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 284
               

               
Conread position:
               
40-717
               

               
Cow position:
               
chr25:14791953-14791269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
706
               

               
Alignm identity:
               
505
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 15
               

               
Conread position:
               
40-728
               

               
Cow position:
               
chr25:16921594-16922293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
714
               

               
Alignm identity:
               
496
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 81
               

               
Conread position:
               
42-366
               

               
Cow position:
               
chr25:33457926-33457604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
16, 67
               

               
Conread position:
               
48-399
               

               
Cow position:
               
chr25:26338655-26338287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
7, 66
               

               
Conread position:
               
50-325
               

               
Cow position:
               
chr25:12807232-12806959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
12, 89
               

               
Conread position:
               
50-717
               

               
Cow position:
               
chr25:23828942-23829604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
695
               

               
Alignm identity:
               
492
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 71
               

               
Conread position:
               
53-305
               

               
Cow position:
               
chr25:35339004-35339250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
9, 55
               

               
Conread position:
               
58-243
               

               
Cow position:
               
chr25:8347833-8347653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
124, 57
               

               
Conread position:
               
60-391
               

               
Cow position:
               
chr25:36835255-36835575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
126, 8
               

               
Conread position:
               
60-463
               

               
Cow position:
               
chr25:13380420-13380853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
91, 42
               

               
Conread position:
               
61-221
               

               
Cow position:
               
chr25:18934459-18934612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
125, 40
               

               
Conread position:
               
61-223
               

               
Cow position:
               
chr25:7684722-7684877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
61-234
               

               
Cow position:
               
chr25:22734183-22734018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
61-240
               

               
Cow position:
               
chr25:24115138-24115312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
125, 47
               

               
Conread position:
               
61-268
               

               
Cow position:
               
chr25:36873160-36873357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
122, 40
               

               
Conread position:
               
61-280
               

               
Cow position:
               
chr25:18288593-18288805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
125, 39
               

               
Conread position:
               
61-285
               

               
Cow position:
               
chr25:22348281-22348504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
127, 79
               

               
Conread position:
               
61-290
               

               
Cow position:
               
chr25:13223075-13222854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
127, 64
               

               
Conread position:
               
61-301
               

               
Cow position:
               
chr25:40682914-40682676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
125, 47
               

               
Conread position:
               
61-305
               

               
Cow position:
               
chr25:12195043-12195283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
73, 140
               

               
Conread position:
               
61-359
               

               
Cow position:
               
chr25:11432775-11433072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
127, 40
               

               
Conread position:
               
61-375
               

               
Cow position:
               
chr25:22756789-22756474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
90, 41
               

               
Conread position:
               
61-379
               

               
Cow position:
               
chr25:4245842-4245551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
226, 48
               

               
Conread position:
               
61-380
               

               
Cow position:
               
chr25:20523061-20523370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
119, 15
               

               
Conread position:
               
61-380
               

               
Cow position:
               
chr25:33557443-33557135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
199, 47
               

               
Conread position:
               
61-384
               

               
Cow position:
               
chr25:26134223-26133894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
85, 46
               

               
Conread position:
               
61-385
               

               
Cow position:
               
chr25:7380661-7380985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
125, 13
               

               
Conread position:
               
61-388
               

               
Cow position:
               
chr25:7673484-7673132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
17, 77
               

               
Conread position:
               
61-397
               

               
Cow position:
               
chr25:6292746-6292410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
99, 41
               

               
Conread position:
               
61-398
               

               
Cow position:
               
chr25:12509844-12510164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
127, 47
               

               
Conread position:
               
61-399
               

               
Cow position:
               
chr25:2624971-2624647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 62
               

               
Conread position:
               
61-399
               

               
Cow position:
               
chr25:13443230-13443566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
125, 50
               

               
Conread position:
               
61-399
               

               
Cow position:
               
chr25:17342638-17342291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
91, 46
               

               
Conread position:
               
61-399
               

               
Cow position:
               
chr25:21893511-21893180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
126, 40
               

               
Conread position:
               
61-399
               

               
Cow position:
               
chr25:22179087-22178759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
127, 41
               

               
Conread position:
               
61-399
               

               
Cow position:
               
chr25:26679404-26679066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 47
               

               
Conread position:
               
61-399
               

               
Cow position:
               
chr25:41150787-41151122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
99, 47
               

               
Conread position:
               
61-418
               

               
Cow position:
               
chr25:34978680-34979043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
57, 25
               

               
Conread position:
               
61-464
               

               
Cow position:
               
chr25:1763261-1762869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
126, 47
               

               
Conread position:
               
61-480
               

               
Cow position:
               
chr25:38135930-38135493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
127, 45
               

               
Conread position:
               
61-485
               

               
Cow position:
               
chr25:19130031-19129594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 39
               

               
Conread position:
               
61-485
               

               
Cow position:
               
chr25:33550688-33550247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 55
               

               
Conread position:
               
61-486
               

               
Cow position:
               
chr25:13099298-13099740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
193, 50
               

               
Conread position:
               
61-487
               

               
Cow position:
               
chr25:17566768-17566326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
80, 30
               

               
Conread position:
               
61-487
               

               
Cow position:
               
chr25:35612123-35612562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
67, 49
               

               
Conread position:
               
61-496
               

               
Cow position:
               
chr25:20023217-20023669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
128, 37
               

               
Conread position:
               
61-523
               

               
Cow position:
               
chr25:16318973-16319423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 30
               

               
Conread position:
               
61-542
               

               
Cow position:
               
chr25:23053740-23053243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 50
               

               
Conread position:
               
61-596
               

               
Cow position:
               
chr25:6682873-6683428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
563
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 86
               

               
Conread position:
               
61-625
               

               
Cow position:
               
chr25:21192764-21193340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
599
               

               
Alignm identity:
               
441
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
222, 47
               

               
Conread position:
               
61-649
               

               
Cow position:
               
chr25:20008311-20007695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
625
               

               
Alignm identity:
               
429
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 47
               

               
Conread position:
               
61-655
               

               
Cow position:
               
chr25:16867422-16866810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
630
               

               
Alignm identity:
               
429
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 53
               

               
Conread position:
               
61-662
               

               
Cow position:
               
chr25:7641278-7641881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
631
               

               
Alignm identity:
               
441
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 51
               

               
Conread position:
               
61-665
               

               
Cow position:
               
chr25:1838420-1837796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
640
               

               
Alignm identity:
               
433
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 47
               

               
Conread position:
               
61-684
               

               
Cow position:
               
chr25:36746271-36746902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
651
               

               
Alignm identity:
               
453
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 47
               

               
Conread position:
               
61-708
               

               
Cow position:
               
chr25:35348083-35347425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
671
               

               
Alignm identity:
               
480
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 50
               

               
Conread position:
               
61-716
               

               
Cow position:
               
chr25:10504158-10504825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
682
               

               
Alignm identity:
               
457
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 41
               

               
Conread position:
               
61-728
               

               
Cow position:
               
chr25:11585706-11585014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
705
               

               
Alignm identity:
               
497
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 263
               

               
Conread position:
               
62-280
               

               
Cow position:
               
chr25:26306027-26306240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
124, 46
               

               
Conread position:
               
62-282
               

               
Cow position:
               
chr25:13826607-13826399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
125, 41
               

               
Conread position:
               
62-359
               

               
Cow position:
               
chr25:17119920-17119626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
124, 53
               

               
Conread position:
               
62-360
               

               
Cow position:
               
chr25:36872539-36872242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
126, 68
               

               
Conread position:
               
62-387
               

               
Cow position:
               
chr25:23244828-23245156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 65
               

               
Conread position:
               
62-453
               

               
Cow position:
               
chr25:34170145-34169727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
45, 163
               

               
Conread position:
               
62-496
               

               
Cow position:
               
chr25:9989926-9990361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 81
               

               
Conread position:
               
62-585
               

               
Cow position:
               
chr25:5846629-5847152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 53
               

               
Conread position:
               
63-375
               

               
Cow position:
               
chr25:19363885-19364193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 62
               

               
Conread position:
               
63-397
               

               
Cow position:
               
chr25:23779158-23779478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
123, 45
               

               
Conread position:
               
63-485
               

               
Cow position:
               
chr25:7306465-7306039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
125, 45
               

               
Conread position:
               
63-716
               

               
Cow position:
               
chr25:4521666-4522304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
660
               

               
Alignm identity:
               
485
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 45
               

               
Conread position:
               
64-711
               

               
Cow position:
               
chr25:22315378-22314718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
676
               

               
Alignm identity:
               
488
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 44
               

               
Conread position:
               
65-240
               

               
Cow position:
               
chr25:35902920-35902751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
119, 43
               

               
Conread position:
               
66-662
               

               
Cow position:
               
chr25:788429-787839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
616
               

               
Alignm identity:
               
437
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 44
               

               
Conread position:
               
70-584
               

               
Cow position:
               
chr25:16065050-16064542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 16
               

               
Conread position:
               
70-695
               

               
Cow position:
               
chr25:33256533-33255906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
653
               

               
Alignm identity:
               
453
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 102
               

               
Conread position:
               
71-312
               

               
Cow position:
               
chr25:11276718-11276479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
64, 17
               

               
Conread position:
               
71-325
               

               
Cow position:
               
chr25:7799721-7799468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 71
               

               
Conread position:
               
71-379
               

               
Cow position:
               
chr25:9843350-9843039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
26, 43
               

               
Conread position:
               
71-547
               

               
Cow position:
               
chr25:15715039-15714560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 36
               

               
Conread position:
               
71-717
               

               
Cow position:
               
chr25:30279027-30279697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
681
               

               
Alignm identity:
               
480
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 257
               

               
Conread position:
               
77-276
               

               
Cow position:
               
chr25:23473602-23473408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
57, 109
               

               
Conread position:
               
77-570
               

               
Cow position:
               
chr25:21245436-21245948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 198
               

               
Conread position:
               
79-373
               

               
Cow position:
               
chr25:18201767-18202059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
66, 43
               

               
Conread position:
               
79-484
               

               
Cow position:
               
chr25:7581254-7581685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
40, 18
               

               
Conread position:
               
79-495
               

               
Cow position:
               
chr25:20785426-20785852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 30
               

               
Conread position:
               
79-706
               

               
Cow position:
               
chr25:24573221-24572592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
648
               

               
Alignm identity:
               
470
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 31
               

               
Conread position:
               
96-487
               

               
Cow position:
               
chr25:38958102-38957717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
88, 41
               

               
Conread position:
               
98-493
               

               
Cow position:
               
chr25:28187798-28188215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
90, 223
               

               
Conread position:
               
104-317
               

               
Cow position:
               
chr25:23505191-23504970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
84, 39
               

               
Conread position:
               
108-344
               

               
Cow position:
               
chr25:36555553-36555793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
13, 39
               

               
Conread position:
               
111-462
               

               
Cow position:
               
chr25:61784-61421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
14, 35
               

               
Conread position:
               
111-662
               

               
Cow position:
               
chr25:11829796-11830329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
564
               

               
Alignm identity:
               
407
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 30
               

               
Conread position:
               
111-667
               

               
Cow position:
               
chr25:41107893-41107322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
580
               

               
Alignm identity:
               
406
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 112
               

               
Conread position:
               
111-717
               

               
Cow position:
               
chr25:26238995-26238384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
628
               

               
Alignm identity:
               
447
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 33
               

               
Conread position:
               
112-399
               

               
Cow position:
               
chr25:17144569-17144265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
30, 116
               

               
Conread position:
               
112-399
               

               
Cow position:
               
chr25:38569344-38569624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
76, 37
               

               
Conread position:
               
112-407
               

               
Cow position:
               
chr25:36017664-36017367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
74, 38
               

               
Conread position:
               
112-441
               

               
Cow position:
               
chr25:12319218-12319553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
23, 51
               

               
Conread position:
               
112-483
               

               
Cow position:
               
chr25:15254213-15254588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 162
               

               
Conread position:
               
112-687
               

               
Cow position:
               
chr25:22531412-22530829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
597
               

               
Alignm identity:
               
433
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 28
               

               
Conread position:
               
115-486
               

               
Cow position:
               
chr25:31230118-31230483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
43, 14
               

               
Conread position:
               
116-305
               

               
Cow position:
               
chr25:7012554-7012362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
50, 25
               

               
Conread position:
               
117-304
               

               
Cow position:
               
chr25:13768096-13767904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
16, 25
               

               
Conread position:
               
117-493
               

               
Cow position:
               
chr25:21894758-21895150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
70, 10
               

               
Conread position:
               
117-496
               

               
Cow position:
               
chr25:14196987-14196585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
41, 29
               

               
Conread position:
               
118-248
               

               
Cow position:
               
chr25:34967384-34967513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
70, 28
               

               
Conread position:
               
118-714
               

               
Cow position:
               
chr25:13569051-13569658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
618
               

               
Alignm identity:
               
425
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 30
               

               
Conread position:
               
121-462
               

               
Cow position:
               
chr25:12840596-12840954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
67, 25
               

               
Conread position:
               
122-487
               

               
Cow position:
               
chr25:26701148-26700779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
66, 16
               

               
Conread position:
               
122-574
               

               
Cow position:
               
chr25:15273796-15273344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 157
               

               
Conread position:
               
123-493
               

               
Cow position:
               
chr25:12116877-12117254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 162
               

               
Conread position:
               
123-628
               

               
Cow position:
               
chr25:4547596-4548123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 20
               

               
Conread position:
               
123-706
               

               
Cow position:
               
chr25:11661696-11662291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
607
               

               
Alignm identity:
               
439
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 18
               

               
Conread position:
               
124-334
               

               
Cow position:
               
chr25:4948081-4947869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
66, 14
               

               
Conread position:
               
124-496
               

               
Cow position:
               
chr25:36081994-36081605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
66, 22
               

               
Conread position:
               
124-696
               

               
Cow position:
               
chr25:26655026-26654440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
599
               

               
Alignm identity:
               
417
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 21
               

               
Conread position:
               
124-707
               

               
Cow position:
               
chr25:27531152-27531744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
603
               

               
Alignm identity:
               
420
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 20
               

               
Conread position:
               
125-373
               

               
Cow position:
               
chr25:14157745-14157489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
5, 17
               

               
Conread position:
               
127-399
               

               
Cow position:
               
chr25:20133199-20133474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
59, 22
               

               
Conread position:
               
132-456
               

               
Cow position:
               
chr25:6961040-6961380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
56, 189
               

               
Conread position:
               
132-547
               

               
Cow position:
               
chr25:25051264-25051703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 190
               

               
Conread position:
               
141-405
               

               
Cow position:
               
chr25:26089709-26089984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
47, 111
               

               
Conread position:
               
141-517
               

               
Cow position:
               
chr25:12778437-12778826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 68
               

               
Conread position:
               
141-678
               

               
Cow position:
               
chr25:21191593-21191039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
565
               

               
Alignm identity:
               
414
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 180
               

               
Conread position:
               
141-711
               

               
Cow position:
               
chr25:2136454-2135882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
594
               

               
Alignm identity:
               
420
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 68
               

               
Conread position:
               
141-717
               

               
Cow position:
               
chr25:11436703-11437291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
596
               

               
Alignm identity:
               
443
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 181
               

               
Conread position:
               
148-385
               

               
Cow position:
               
chr25:8961867-8961629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
40, 72
               

               
Conread position:
               
148-385
               

               
Cow position:
               
chr25:14720841-14720610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
40, 169
               

               
Conread position:
               
148-479
               

               
Cow position:
               
chr25:10156666-10156338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
31, 13
               

               
Conread position:
               
148-487
               

               
Cow position:
               
chr25:14809370-14809049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
38, 123
               

               
Conread position:
               
148-551
               

               
Cow position:
               
chr25:17975281-17975690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 118
               

               
Conread position:
               
148-559
               

               
Cow position:
               
chr25:36036682-36037121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 164
               

               
Conread position:
               
149-473
               

               
Cow position:
               
chr25:18266260-18265917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
38, 176
               

               
Conread position:
               
151-715
               

               
Cow position:
               
chr25:6227129-6226566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
580
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 108
               

               
Conread position:
               
163-518
               

               
Cow position:
               
chr25:14118173-14117817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 30
               

               
Conread position:
               
165-487
               

               
Cow position:
               
chr25:4681310-4681002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
23, 49
               

               
Conread position:
               
165-599
               

               
Cow position:
               
chr25:40956905-40957357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
85, 157
               

               
Conread position:
               
172-487
               

               
Cow position:
               
chr25:11131657-11131324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
16, 30
               

               
Conread position:
               
174-467
               

               
Cow position:
               
chr25:15377397-15377092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
14, 37
               

               
Conread position:
               
174-702
               

               
Cow position:
               
chr25:8576765-8576218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
561
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 95
               

               
Conread position:
               
178-376
               

               
Cow position:
               
chr25:24052033-24051827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
10, 139
               

               
Conread position:
               
178-714
               

               
Cow position:
               
chr25:14570440-14569876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
572
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
39, 33
               

               
Conread position:
               
184-485
               

               
Cow position:
               
chr25:12081262-12081574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
97, 45
               

               
Conread position:
               
184-643
               

               
Cow position:
               
chr25:32191720-32191251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
203, 28
               

               
Conread position:
               
185-361
               

               
Cow position:
               
chr25:26642646-26642462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
32, 136
               

               
Conread position:
               
185-373
               

               
Cow position:
               
chr25:7449859-7449675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
95, 87
               

               
Conread position:
               
186-728
               

               
Cow position:
               
chr25:13333464-13332919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
567
               

               
Alignm identity:
               
384
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 22
               

               
Conread position:
               
210-502
               

               
Cow position:
               
chr25:14266484-14266778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
176, 54
               

               
Conread position:
               
213-657
               

               
Cow position:
               
chr25:7801172-7800707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 109
               

               
Conread position:
               
213-687
               

               
Cow position:
               
chr25:6891504-6891989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 50
               

               
Conread position:
               
214-723
               

               
Cow position:
               
chr25:20496562-20496038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 116
               

               
Conread position:
               
223-487
               

               
Cow position:
               
chr25:35333177-35332912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
58, 12
               

               
Conread position:
               
227-456
               

               
Cow position:
               
chr25:36033455-36033206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
37, 92
               

               
Conread position:
               
232-716
               

               
Cow position:
               
chr25:11054916-11054442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 85
               

               
Conread position:
               
233-484
               

               
Cow position:
               
chr25:16001514-16001779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
29, 85
               

               
Conread position:
               
235-620
               

               
Cow position:
               
chr25:12234752-12235146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
15, 84
               

               
Conread position:
               
247-399
               

               
Cow position:
               
chr25:12899749-12899596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
137, 67
               

               
Conread position:
               
247-556
               

               
Cow position:
               
chr25:15694972-15694655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 10
               

               
Conread position:
               
248-528
               

               
Cow position:
               
chr25:8347500-8347207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 7
               

               
Conread position:
               
264-487
               

               
Cow position:
               
chr25:10448734-10448960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
21, 37
               

               
Conread position:
               
267-729
               

               
Cow position:
               
chr25:33839353-33838888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 48
               

               
Conread position:
               
276-670
               

               
Cow position:
               
chr25:15319882-15319488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 34
               

               
Conread position:
               
277-460
               

               
Cow position:
               
chr25:6255974-6256172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
31, 19
               

               
Conread position:
               
277-608
               

               
Cow position:
               
chr25:9634868-9634551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 37
               

               
Conread position:
               
279-728
               

               
Cow position:
               
chr25:12204431-12203969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 36
               

               
Conread position:
               
279-728
               

               
Cow position:
               
chr25:26112229-26111784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 37
               

               
Conread position:
               
288-700
               

               
Cow position:
               
chr25:12824068-12824501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 26
               

               
Conread position:
               
294-493
               

               
Cow position:
               
chr25:10746843-10746636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
92, 20
               

               
Conread position:
               
318-739
               

               
Cow position:
               
chr25:2110999-2110575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 221
               

               
Conread position:
               
353-585
               

               
Cow position:
               
chr25:14104172-14103940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
48, 77
               
Show alignments to all cow chromosomes.