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Cow genome map

           
Conread name:
           
Spl1-SPL01E050073
        

               
Conread position:
               
8-230
               

               
Cow position:
               
chr5:46421858-46421628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
32, 13
               

               
Conread position:
               
20-365
               

               
Cow position:
               
chr5:30233157-30232802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
42, 34
               

               
Conread position:
               
26-260
               

               
Cow position:
               
chr5:3743569-3743334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
30, 24
               

               
Conread position:
               
27-728
               

               
Cow position:
               
chr5:32394843-32394140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
726
               

               
Alignm identity:
               
485
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 78
               

               
Conread position:
               
34-397
               

               
Cow position:
               
chr5:44028072-44028433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 21
               

               
Conread position:
               
34-717
               

               
Cow position:
               
chr5:57934886-57935563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
712
               

               
Alignm identity:
               
525
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 74
               

               
Conread position:
               
35-276
               

               
Cow position:
               
chr5:22795440-22795213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
20, 42
               

               
Conread position:
               
35-276
               

               
Cow position:
               
chr5:60514792-60515031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
26, 89
               

               
Conread position:
               
35-283
               

               
Cow position:
               
chr5:45186883-45187127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
43, 98
               

               
Conread position:
               
35-285
               

               
Cow position:
               
chr5:34914822-34915064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
45, 74
               

               
Conread position:
               
35-286
               

               
Cow position:
               
chr5:39036015-39035768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
27, 112
               

               
Conread position:
               
35-296
               

               
Cow position:
               
chr5:52108026-52108296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
26, 19
               

               
Conread position:
               
35-300
               

               
Cow position:
               
chr5:26548911-26549175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
27, 19
               

               
Conread position:
               
35-371
               

               
Cow position:
               
chr5:36038768-36039107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
21, 59
               

               
Conread position:
               
35-380
               

               
Cow position:
               
chr5:42670640-42670968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
27, 62
               

               
Conread position:
               
35-380
               

               
Cow position:
               
chr5:60016396-60016055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
152, 80
               

               
Conread position:
               
35-468
               

               
Cow position:
               
chr5:35969773-35969328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 204
               

               
Conread position:
               
35-496
               

               
Cow position:
               
chr5:58144371-58144848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
27, 36
               

               
Conread position:
               
35-588
               

               
Cow position:
               
chr5:61726189-61725639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
582
               

               
Alignm identity:
               
409
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 13
               

               
Conread position:
               
35-589
               

               
Cow position:
               
chr5:43858185-43858761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
588
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 83
               

               
Conread position:
               
35-613
               

               
Cow position:
               
chr5:9893892-9894481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
604
               

               
Alignm identity:
               
428
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 49
               

               
Conread position:
               
35-716
               

               
Cow position:
               
chr5:35208495-35207801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
711
               

               
Alignm identity:
               
488
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 19
               

               
Conread position:
               
35-728
               

               
Cow position:
               
chr5:26467860-26467150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
726
               

               
Alignm identity:
               
523
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
35-728
               

               
Cow position:
               
chr5:64321994-64321283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
730
               

               
Alignm identity:
               
519
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 154
               

               
Conread position:
               
36-203
               

               
Cow position:
               
chr5:32975995-32975827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
27, 40
               

               
Conread position:
               
36-384
               

               
Cow position:
               
chr5:55956142-55955793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
26, 73
               

               
Conread position:
               
36-399
               

               
Cow position:
               
chr5:41009780-41010127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
26, 9
               

               
Conread position:
               
36-511
               

               
Cow position:
               
chr5:5856091-5855623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
26, 12
               

               
Conread position:
               
38-186
               

               
Cow position:
               
chr5:74050053-74049911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
24, 16
               

               
Conread position:
               
38-248
               

               
Cow position:
               
chr5:35190335-35190134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
146, 70
               

               
Conread position:
               
38-385
               

               
Cow position:
               
chr5:33560508-33560851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
24, 71
               

               
Conread position:
               
38-651
               

               
Cow position:
               
chr5:14550351-14550982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
639
               

               
Alignm identity:
               
443
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 93
               

               
Conread position:
               
38-728
               

               
Cow position:
               
chr5:74643453-74644132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
701
               

               
Alignm identity:
               
507
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 66
               

               
Conread position:
               
39-404
               

               
Cow position:
               
chr5:3549576-3549923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
23, 64
               

               
Conread position:
               
39-487
               

               
Cow position:
               
chr5:41165311-41164855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 72
               

               
Conread position:
               
39-496
               

               
Cow position:
               
chr5:35685166-35684692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 30
               

               
Conread position:
               
40-308
               

               
Cow position:
               
chr5:49341807-49342090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
22, 273
               

               
Conread position:
               
40-344
               

               
Cow position:
               
chr5:19752529-19752229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
22, 69
               

               
Conread position:
               
40-372
               

               
Cow position:
               
chr5:12557059-12557396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
22, 69
               

               
Conread position:
               
40-397
               

               
Cow position:
               
chr5:42050772-42050419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
22, 38
               

               
Conread position:
               
40-399
               

               
Cow position:
               
chr5:991702-991332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 60
               

               
Conread position:
               
40-399
               

               
Cow position:
               
chr5:34562237-34561878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
22, 54
               

               
Conread position:
               
40-399
               

               
Cow position:
               
chr5:74581015-74580662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
15, 86
               

               
Conread position:
               
40-564
               

               
Cow position:
               
chr5:65941022-65941560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
553
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 73
               

               
Conread position:
               
40-703
               

               
Cow position:
               
chr5:17086789-17087468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
699
               

               
Alignm identity:
               
512
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 72
               

               
Conread position:
               
40-717
               

               
Cow position:
               
chr5:21617683-21617007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
704
               

               
Alignm identity:
               
506
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 68
               

               
Conread position:
               
41-493
               

               
Cow position:
               
chr5:13537385-13536918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
17, 239
               

               
Conread position:
               
42-394
               

               
Cow position:
               
chr5:49474328-49474671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
20, 67
               

               
Conread position:
               
51-398
               

               
Cow position:
               
chr5:64026799-64027141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 89
               

               
Conread position:
               
51-399
               

               
Cow position:
               
chr5:65967516-65967862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
7, 45
               

               
Conread position:
               
53-528
               

               
Cow position:
               
chr5:52905282-52905762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
8, 50
               

               
Conread position:
               
58-243
               

               
Cow position:
               
chr5:54312810-54312630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
129, 61
               

               
Conread position:
               
58-400
               

               
Cow position:
               
chr5:60175696-60175334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
49, 111
               

               
Conread position:
               
58-475
               

               
Cow position:
               
chr5:15721879-15722275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
132, 20
               

               
Conread position:
               
59-259
               

               
Cow position:
               
chr5:46704092-46704286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
129, 47
               

               
Conread position:
               
59-523
               

               
Cow position:
               
chr5:12351606-12352051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 9
               

               
Conread position:
               
60-399
               

               
Cow position:
               
chr5:35246901-35247244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
126, 55
               

               
Conread position:
               
60-523
               

               
Cow position:
               
chr5:57328004-57327519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
121, 48
               

               
Conread position:
               
60-735
               

               
Cow position:
               
chr5:12322604-12323274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
694
               

               
Alignm identity:
               
472
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 48
               

               
Conread position:
               
61-243
               

               
Cow position:
               
chr5:34288048-34288221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
125, 47
               

               
Conread position:
               
61-257
               

               
Cow position:
               
chr5:26147795-26147606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
127, 7
               

               
Conread position:
               
61-260
               

               
Cow position:
               
chr5:2240783-2240977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
123, 60
               

               
Conread position:
               
61-276
               

               
Cow position:
               
chr5:51298509-51298717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
126, 47
               

               
Conread position:
               
61-280
               

               
Cow position:
               
chr5:69383457-69383247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
127, 54
               

               
Conread position:
               
61-281
               

               
Cow position:
               
chr5:49501612-49501832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
125, 215
               

               
Conread position:
               
61-284
               

               
Cow position:
               
chr5:17105051-17104841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
125, 47
               

               
Conread position:
               
61-284
               

               
Cow position:
               
chr5:60523933-60523721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
125, 47
               

               
Conread position:
               
61-305
               

               
Cow position:
               
chr5:20288052-20288302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
91, 61
               

               
Conread position:
               
61-305
               

               
Cow position:
               
chr5:31052594-31052347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
65, 32
               

               
Conread position:
               
61-308
               

               
Cow position:
               
chr5:69099925-69099677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
127, 47
               

               
Conread position:
               
61-330
               

               
Cow position:
               
chr5:59626766-59627036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 47
               

               
Conread position:
               
61-351
               

               
Cow position:
               
chr5:43403115-43402817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
55, 61
               

               
Conread position:
               
61-365
               

               
Cow position:
               
chr5:33834246-33833948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
125, 47
               

               
Conread position:
               
61-367
               

               
Cow position:
               
chr5:56548772-56548479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
123, 40
               

               
Conread position:
               
61-373
               

               
Cow position:
               
chr5:53947105-53946790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
94, 54
               

               
Conread position:
               
61-375
               

               
Cow position:
               
chr5:43370987-43371305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
85, 54
               

               
Conread position:
               
61-376
               

               
Cow position:
               
chr5:12434741-12434427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
125, 47
               

               
Conread position:
               
61-376
               

               
Cow position:
               
chr5:64697994-64697676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
70, 49
               

               
Conread position:
               
61-381
               

               
Cow position:
               
chr5:31475890-31475568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
92, 54
               

               
Conread position:
               
61-385
               

               
Cow position:
               
chr5:19335571-19335904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
99, 50
               

               
Conread position:
               
61-385
               

               
Cow position:
               
chr5:32338754-32339081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
50, 35
               

               
Conread position:
               
61-386
               

               
Cow position:
               
chr5:22667276-22666975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 50
               

               
Conread position:
               
61-391
               

               
Cow position:
               
chr5:35826804-35826479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 64
               

               
Conread position:
               
61-397
               

               
Cow position:
               
chr5:46512562-46512895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 15
               

               
Conread position:
               
61-398
               

               
Cow position:
               
chr5:30628947-30629291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 76
               

               
Conread position:
               
61-399
               

               
Cow position:
               
chr5:7044500-7044841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 49
               

               
Conread position:
               
61-399
               

               
Cow position:
               
chr5:12673274-12673594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
127, 47
               

               
Conread position:
               
61-399
               

               
Cow position:
               
chr5:17767947-17768277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
98, 18
               

               
Conread position:
               
61-399
               

               
Cow position:
               
chr5:45397771-45397444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
199, 15
               

               
Conread position:
               
61-399
               

               
Cow position:
               
chr5:70951687-70952010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
17, 43
               

               
Conread position:
               
61-399
               

               
Cow position:
               
chr5:73167808-73168132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
125, 54
               

               
Conread position:
               
61-403
               

               
Cow position:
               
chr5:7057191-7057541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
125, 94
               

               
Conread position:
               
61-404
               

               
Cow position:
               
chr5:35459090-35459430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
128, 50
               

               
Conread position:
               
61-405
               

               
Cow position:
               
chr5:34976633-34976982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
73, 41
               

               
Conread position:
               
61-437
               

               
Cow position:
               
chr5:60598981-60599346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
49, 104
               

               
Conread position:
               
61-461
               

               
Cow position:
               
chr5:51053442-51053855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
127, 60
               

               
Conread position:
               
61-466
               

               
Cow position:
               
chr5:48154257-48154685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
82, 46
               

               
Conread position:
               
61-475
               

               
Cow position:
               
chr5:40152693-40152254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
90, 46
               

               
Conread position:
               
61-476
               

               
Cow position:
               
chr5:56028339-56028752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 47
               

               
Conread position:
               
61-479
               

               
Cow position:
               
chr5:64175924-64176346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 47
               

               
Conread position:
               
61-483
               

               
Cow position:
               
chr5:56071064-56070624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 41
               

               
Conread position:
               
61-485
               

               
Cow position:
               
chr5:11229465-11229905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 28
               

               
Conread position:
               
61-485
               

               
Cow position:
               
chr5:20779193-20779611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
127, 71
               

               
Conread position:
               
61-486
               

               
Cow position:
               
chr5:20128260-20127822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
92, 47
               

               
Conread position:
               
61-487
               

               
Cow position:
               
chr5:17062873-17063327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
90, 40
               

               
Conread position:
               
61-487
               

               
Cow position:
               
chr5:24996015-24996457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 35
               

               
Conread position:
               
61-493
               

               
Cow position:
               
chr5:11667978-11668417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 47
               

               
Conread position:
               
61-494
               

               
Cow position:
               
chr5:25035048-25035467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 79
               

               
Conread position:
               
61-495
               

               
Cow position:
               
chr5:25495145-25495580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 9
               

               
Conread position:
               
61-496
               

               
Cow position:
               
chr5:40109690-40109259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 47
               

               
Conread position:
               
61-511
               

               
Cow position:
               
chr5:19278497-19278950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 71
               

               
Conread position:
               
61-576
               

               
Cow position:
               
chr5:68719073-68718570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 28
               

               
Conread position:
               
61-582
               

               
Cow position:
               
chr5:65753066-65752534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
547
               

               
Alignm identity:
               
390
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 51
               

               
Conread position:
               
61-595
               

               
Cow position:
               
chr5:39937323-39936764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
570
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 50
               

               
Conread position:
               
61-604
               

               
Cow position:
               
chr5:62107278-62107837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
573
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
127, 50
               

               
Conread position:
               
61-619
               

               
Cow position:
               
chr5:44993834-44994408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
592
               

               
Alignm identity:
               
397
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 90
               

               
Conread position:
               
61-693
               

               
Cow position:
               
chr5:69338020-69337377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
669
               

               
Alignm identity:
               
461
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 30
               

               
Conread position:
               
61-711
               

               
Cow position:
               
chr5:30276893-30276247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
673
               

               
Alignm identity:
               
477
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 48
               

               
Conread position:
               
61-711
               

               
Cow position:
               
chr5:63647271-63647922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
673
               

               
Alignm identity:
               
459
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 46
               

               
Conread position:
               
61-712
               

               
Cow position:
               
chr5:37941601-37942245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
674
               

               
Alignm identity:
               
472
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 46
               

               
Conread position:
               
61-714
               

               
Cow position:
               
chr5:30303087-30302440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
674
               

               
Alignm identity:
               
504
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 47
               

               
Conread position:
               
61-714
               

               
Cow position:
               
chr5:35145541-35144885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
676
               

               
Alignm identity:
               
463
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 157
               

               
Conread position:
               
61-717
               

               
Cow position:
               
chr5:3582761-3582116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
677
               

               
Alignm identity:
               
469
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 55
               

               
Conread position:
               
61-717
               

               
Cow position:
               
chr5:50600252-50599610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
663
               

               
Alignm identity:
               
467
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 45
               

               
Conread position:
               
61-717
               

               
Cow position:
               
chr5:66257840-66257187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
676
               

               
Alignm identity:
               
496
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 42
               

               
Conread position:
               
61-728
               

               
Cow position:
               
chr5:8024009-8024665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
692
               

               
Alignm identity:
               
461
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
189, 15
               

               
Conread position:
               
61-728
               

               
Cow position:
               
chr5:16893572-16894241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
694
               

               
Alignm identity:
               
493
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 47
               

               
Conread position:
               
61-728
               

               
Cow position:
               
chr5:18574388-18573698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
701
               

               
Alignm identity:
               
489
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 92
               

               
Conread position:
               
61-728
               

               
Cow position:
               
chr5:29828254-29827581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
682
               

               
Alignm identity:
               
487
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 75
               

               
Conread position:
               
61-728
               

               
Cow position:
               
chr5:45845484-45846164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
699
               

               
Alignm identity:
               
496
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 47
               

               
Conread position:
               
61-728
               

               
Cow position:
               
chr5:52164967-52165651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
697
               

               
Alignm identity:
               
487
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 109
               

               
Conread position:
               
61-728
               

               
Cow position:
               
chr5:55756207-55756911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
716
               

               
Alignm identity:
               
482
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 60
               

               
Conread position:
               
61-728
               

               
Cow position:
               
chr5:67932260-67932941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
692
               

               
Alignm identity:
               
464
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 195
               

               
Conread position:
               
61-731
               

               
Cow position:
               
chr5:39447319-39448009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
695
               

               
Alignm identity:
               
483
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 245
               

               
Conread position:
               
61-731
               

               
Cow position:
               
chr5:53835927-53835220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
713
               

               
Alignm identity:
               
514
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
201, 71
               

               
Conread position:
               
62-259
               

               
Cow position:
               
chr5:55942172-55942366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
127, 67
               

               
Conread position:
               
62-300
               

               
Cow position:
               
chr5:8736072-8736323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
124, 49
               

               
Conread position:
               
62-301
               

               
Cow position:
               
chr5:73253610-73253381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
215, 46
               

               
Conread position:
               
62-304
               

               
Cow position:
               
chr5:66466518-66466281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
153, 12
               

               
Conread position:
               
62-340
               

               
Cow position:
               
chr5:6438820-6439105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
160, 46
               

               
Conread position:
               
62-366
               

               
Cow position:
               
chr5:17554830-17555126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
127, 46
               

               
Conread position:
               
62-378
               

               
Cow position:
               
chr5:14920721-14921040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
125, 46
               

               
Conread position:
               
62-383
               

               
Cow position:
               
chr5:12902124-12901800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
96, 40
               

               
Conread position:
               
62-400
               

               
Cow position:
               
chr5:66582175-66581828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
68, 99
               

               
Conread position:
               
62-403
               

               
Cow position:
               
chr5:56014927-56014598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
127, 49
               

               
Conread position:
               
62-406
               

               
Cow position:
               
chr5:50858141-50857796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
87, 45
               

               
Conread position:
               
62-458
               

               
Cow position:
               
chr5:50942957-50943359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
127, 46
               

               
Conread position:
               
62-484
               

               
Cow position:
               
chr5:30253945-30253515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 43
               

               
Conread position:
               
62-496
               

               
Cow position:
               
chr5:55966668-55967125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 95
               

               
Conread position:
               
62-585
               

               
Cow position:
               
chr5:44796531-44797044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 35
               

               
Conread position:
               
63-518
               

               
Cow position:
               
chr5:64139761-64139299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 23
               

               
Conread position:
               
63-618
               

               
Cow position:
               
chr5:66339277-66338724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
577
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 44
               

               
Conread position:
               
63-717
               

               
Cow position:
               
chr5:66366713-66366073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
668
               

               
Alignm identity:
               
482
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 75
               

               
Conread position:
               
64-569
               

               
Cow position:
               
chr5:53055356-53055866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 52
               

               
Conread position:
               
64-717
               

               
Cow position:
               
chr5:52040118-52040771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
677
               

               
Alignm identity:
               
434
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 47
               

               
Conread position:
               
64-728
               

               
Cow position:
               
chr5:48829358-48828674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
702
               

               
Alignm identity:
               
470
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 47
               

               
Conread position:
               
65-397
               

               
Cow position:
               
chr5:56877672-56877356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
123, 38
               

               
Conread position:
               
66-399
               

               
Cow position:
               
chr5:65136460-65136154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
120, 35
               

               
Conread position:
               
66-481
               

               
Cow position:
               
chr5:72895887-72895465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
122, 45
               

               
Conread position:
               
68-676
               

               
Cow position:
               
chr5:33414209-33414825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
632
               

               
Alignm identity:
               
435
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 42
               

               
Conread position:
               
68-726
               

               
Cow position:
               
chr5:47602007-47601343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
684
               

               
Alignm identity:
               
488
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 28
               

               
Conread position:
               
71-259
               

               
Cow position:
               
chr5:38169089-38168907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
102, 37
               

               
Conread position:
               
71-444
               

               
Cow position:
               
chr5:69461531-69461144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
117, 45
               

               
Conread position:
               
71-630
               

               
Cow position:
               
chr5:47316776-47317342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
577
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 33
               

               
Conread position:
               
71-711
               

               
Cow position:
               
chr5:21829063-21828401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
672
               

               
Alignm identity:
               
494
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
203, 55
               

               
Conread position:
               
72-484
               

               
Cow position:
               
chr5:57074137-57074565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 38
               

               
Conread position:
               
76-351
               

               
Cow position:
               
chr5:17602014-17602281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
111, 32
               

               
Conread position:
               
77-493
               

               
Cow position:
               
chr5:38833307-38832878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 27
               

               
Conread position:
               
77-571
               

               
Cow position:
               
chr5:5110867-5111392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 256
               

               
Conread position:
               
77-717
               

               
Cow position:
               
chr5:55232629-55233230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
647
               

               
Alignm identity:
               
459
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 34
               

               
Conread position:
               
78-464
               

               
Cow position:
               
chr5:71495011-71494606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
78, 30
               

               
Conread position:
               
79-440
               

               
Cow position:
               
chr5:57767797-57768151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
107, 29
               

               
Conread position:
               
79-494
               

               
Cow position:
               
chr5:32975370-32975791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
74, 29
               

               
Conread position:
               
79-602
               

               
Cow position:
               
chr5:42845405-42845946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
554
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 29
               

               
Conread position:
               
87-443
               

               
Cow position:
               
chr5:7755383-7755742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 25
               

               
Conread position:
               
88-400
               

               
Cow position:
               
chr5:14473220-14473550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
42, 18
               

               
Conread position:
               
100-322
               

               
Cow position:
               
chr5:35982563-35982793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
21, 220
               

               
Conread position:
               
100-457
               

               
Cow position:
               
chr5:23168653-23169022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 222
               

               
Conread position:
               
102-484
               

               
Cow position:
               
chr5:22242596-22243015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
20, 5
               

               
Conread position:
               
103-305
               

               
Cow position:
               
chr5:66531087-66530879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
180, 41
               

               
Conread position:
               
104-717
               

               
Cow position:
               
chr5:55177052-55176425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
649
               

               
Alignm identity:
               
442
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 10
               

               
Conread position:
               
106-385
               

               
Cow position:
               
chr5:19524067-19523780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
47, 55
               

               
Conread position:
               
107-380
               

               
Cow position:
               
chr5:7698166-7697893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
73, 207
               

               
Conread position:
               
107-399
               

               
Cow position:
               
chr5:25230852-25231138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
5, 63
               

               
Conread position:
               
107-717
               

               
Cow position:
               
chr5:4166808-4166211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
623
               

               
Alignm identity:
               
464
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 68
               

               
Conread position:
               
108-385
               

               
Cow position:
               
chr5:49440708-49440989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
80, 14
               

               
Conread position:
               
108-398
               

               
Cow position:
               
chr5:63865955-63865662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
80, 33
               

               
Conread position:
               
108-493
               

               
Cow position:
               
chr5:30845273-30844873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
74, 38
               

               
Conread position:
               
109-398
               

               
Cow position:
               
chr5:30949747-30950049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
30, 210
               

               
Conread position:
               
111-386
               

               
Cow position:
               
chr5:64591935-64592212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
78, 35
               

               
Conread position:
               
111-399
               

               
Cow position:
               
chr5:4221137-4220850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
77, 26
               

               
Conread position:
               
111-498
               

               
Cow position:
               
chr5:50533228-50533628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 29
               

               
Conread position:
               
111-728
               

               
Cow position:
               
chr5:4031824-4032483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
662
               

               
Alignm identity:
               
443
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 215
               

               
Conread position:
               
112-326
               

               
Cow position:
               
chr5:40242201-40241984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
136, 17
               

               
Conread position:
               
112-381
               

               
Cow position:
               
chr5:13717411-13717684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
11, 29
               

               
Conread position:
               
112-383
               

               
Cow position:
               
chr5:44726172-44726441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
20, 153
               

               
Conread position:
               
112-399
               

               
Cow position:
               
chr5:54060437-54060143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
76, 122
               

               
Conread position:
               
112-487
               

               
Cow position:
               
chr5:34301079-34300692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 102
               

               
Conread position:
               
112-487
               

               
Cow position:
               
chr5:57626950-57626576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
30, 76
               

               
Conread position:
               
112-496
               

               
Cow position:
               
chr5:26476859-26477235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
74, 34
               

               
Conread position:
               
112-523
               

               
Cow position:
               
chr5:43992483-43992056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
76, 34
               

               
Conread position:
               
112-694
               

               
Cow position:
               
chr5:46509705-46510306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
608
               

               
Alignm identity:
               
437
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 30
               

               
Conread position:
               
112-696
               

               
Cow position:
               
chr5:50821946-50821349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
604
               

               
Alignm identity:
               
445
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 148
               

               
Conread position:
               
112-727
               

               
Cow position:
               
chr5:9089867-9090476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
636
               

               
Alignm identity:
               
424
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
165, 68
               

               
Conread position:
               
112-728
               

               
Cow position:
               
chr5:16205994-16206614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
629
               

               
Alignm identity:
               
441
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 119
               

               
Conread position:
               
113-312
               

               
Cow position:
               
chr5:56338861-56339065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
113-496
               

               
Cow position:
               
chr5:29352968-29353371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
74, 26
               

               
Conread position:
               
113-496
               

               
Cow position:
               
chr5:43929578-43929976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 27
               

               
Conread position:
               
114-631
               

               
Cow position:
               
chr5:43457374-43457883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
44, 24
               

               
Conread position:
               
114-723
               

               
Cow position:
               
chr5:4709991-4710602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
635
               

               
Alignm identity:
               
417
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 102
               

               
Conread position:
               
115-282
               

               
Cow position:
               
chr5:9233832-9234000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
42, 23
               

               
Conread position:
               
115-399
               

               
Cow position:
               
chr5:20422035-20422313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
49, 45
               

               
Conread position:
               
116-380
               

               
Cow position:
               
chr5:58446963-58446691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
72, 26
               

               
Conread position:
               
117-373
               

               
Cow position:
               
chr5:62378934-62378686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
47, 23
               

               
Conread position:
               
117-377
               

               
Cow position:
               
chr5:60183960-60183692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
117-487
               

               
Cow position:
               
chr5:36855360-36854979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
71, 21
               

               
Conread position:
               
117-659
               

               
Cow position:
               
chr5:62172564-62172003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
572
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 22
               

               
Conread position:
               
118-344
               

               
Cow position:
               
chr5:69636377-69636159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
70, 31
               

               
Conread position:
               
118-696
               

               
Cow position:
               
chr5:14314683-14314083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
608
               

               
Alignm identity:
               
437
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 24
               

               
Conread position:
               
118-723
               

               
Cow position:
               
chr5:41545740-41546359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
635
               

               
Alignm identity:
               
452
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 28
               

               
Conread position:
               
120-717
               

               
Cow position:
               
chr5:6045447-6044825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
628
               

               
Alignm identity:
               
465
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 18
               

               
Conread position:
               
121-728
               

               
Cow position:
               
chr5:28224602-28223990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
629
               

               
Alignm identity:
               
422
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 25
               

               
Conread position:
               
122-372
               

               
Cow position:
               
chr5:54375353-54375611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
66, 18
               

               
Conread position:
               
122-399
               

               
Cow position:
               
chr5:44446716-44447002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 18
               

               
Conread position:
               
122-404
               

               
Cow position:
               
chr5:45574771-45574480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
66, 203
               

               
Conread position:
               
122-481
               

               
Cow position:
               
chr5:8820864-8821239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
68, 24
               

               
Conread position:
               
122-496
               

               
Cow position:
               
chr5:54350212-54350603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 41
               

               
Conread position:
               
122-728
               

               
Cow position:
               
chr5:37378003-37377397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
627
               

               
Alignm identity:
               
427
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 20
               

               
Conread position:
               
123-399
               

               
Cow position:
               
chr5:47696300-47696573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
139, 65
               

               
Conread position:
               
123-399
               

               
Cow position:
               
chr5:57101635-57101910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
62, 14
               

               
Conread position:
               
123-485
               

               
Cow position:
               
chr5:64758615-64758998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
8, 199
               

               
Conread position:
               
123-505
               

               
Cow position:
               
chr5:67244068-67243674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
66, 87
               

               
Conread position:
               
123-676
               

               
Cow position:
               
chr5:56524322-56523754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
581
               

               
Alignm identity:
               
417
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 23
               

               
Conread position:
               
124-451
               

               
Cow position:
               
chr5:69731647-69731320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
64, 16
               

               
Conread position:
               
125-717
               

               
Cow position:
               
chr5:15364028-15363433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
612
               

               
Alignm identity:
               
433
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 15
               

               
Conread position:
               
126-496
               

               
Cow position:
               
chr5:57737244-57736871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
62, 22
               

               
Conread position:
               
126-714
               

               
Cow position:
               
chr5:74016087-74015485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
613
               

               
Alignm identity:
               
419
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 34
               

               
Conread position:
               
134-399
               

               
Cow position:
               
chr5:14629666-14629947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
44, 194
               

               
Conread position:
               
136-496
               

               
Cow position:
               
chr5:52000355-51999977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
126, 67
               

               
Conread position:
               
137-604
               

               
Cow position:
               
chr5:58793470-58793962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 5
               

               
Conread position:
               
138-487
               

               
Cow position:
               
chr5:37814761-37814390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 219
               

               
Conread position:
               
138-591
               

               
Cow position:
               
chr5:20783757-20783292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 95
               

               
Conread position:
               
141-398
               

               
Cow position:
               
chr5:6286301-6286557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
47, 130
               

               
Conread position:
               
141-728
               

               
Cow position:
               
chr5:29903391-29903993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
609
               

               
Alignm identity:
               
445
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 173
               

               
Conread position:
               
148-305
               

               
Cow position:
               
chr5:61102841-61102676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
41, 91
               

               
Conread position:
               
148-399
               

               
Cow position:
               
chr5:57575898-57575633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
40, 177
               

               
Conread position:
               
148-403
               

               
Cow position:
               
chr5:39875249-39874985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
38, 150
               

               
Conread position:
               
148-443
               

               
Cow position:
               
chr5:48009734-48010036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
38, 99
               

               
Conread position:
               
148-472
               

               
Cow position:
               
chr5:62142801-62142452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
40, 192
               

               
Conread position:
               
148-702
               

               
Cow position:
               
chr5:19813095-19813667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
583
               

               
Alignm identity:
               
395
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 158
               

               
Conread position:
               
148-710
               

               
Cow position:
               
chr5:15598113-15598687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
581
               

               
Alignm identity:
               
423
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 35
               

               
Conread position:
               
148-711
               

               
Cow position:
               
chr5:56467815-56467250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
580
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 97
               

               
Conread position:
               
148-719
               

               
Cow position:
               
chr5:4218982-4218420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
586
               

               
Alignm identity:
               
412
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 23
               

               
Conread position:
               
149-399
               

               
Cow position:
               
chr5:72951968-72951705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
39, 174
               

               
Conread position:
               
150-467
               

               
Cow position:
               
chr5:45804182-45803847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
37, 19
               

               
Conread position:
               
153-728
               

               
Cow position:
               
chr5:35763384-35762819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
584
               

               
Alignm identity:
               
431
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 60
               

               
Conread position:
               
154-708
               

               
Cow position:
               
chr5:20407559-20408110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
571
               

               
Alignm identity:
               
409
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 117
               

               
Conread position:
               
156-508
               

               
Cow position:
               
chr5:31640542-31640173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
32, 157
               

               
Conread position:
               
163-399
               

               
Cow position:
               
chr5:46425745-46425985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
24, 153
               

               
Conread position:
               
163-486
               

               
Cow position:
               
chr5:41636977-41636641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
99, 53
               

               
Conread position:
               
165-398
               

               
Cow position:
               
chr5:62639012-62638774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
23, 91
               

               
Conread position:
               
165-493
               

               
Cow position:
               
chr5:43737855-43738187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
23, 103
               

               
Conread position:
               
165-595
               

               
Cow position:
               
chr5:52644972-52645419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 154
               

               
Conread position:
               
166-375
               

               
Cow position:
               
chr5:56636002-56635793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
23, 98
               

               
Conread position:
               
169-719
               

               
Cow position:
               
chr5:32696719-32697248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
564
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 151
               

               
Conread position:
               
172-487
               

               
Cow position:
               
chr5:33537970-33537661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
7, 91
               

               
Conread position:
               
172-672
               

               
Cow position:
               
chr5:61840289-61839772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 94
               

               
Conread position:
               
174-487
               

               
Cow position:
               
chr5:73080304-73079979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
14, 74
               

               
Conread position:
               
184-396
               

               
Cow position:
               
chr5:33552335-33552539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
203, 86
               

               
Conread position:
               
184-464
               

               
Cow position:
               
chr5:18899063-18898773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
85, 19
               

               
Conread position:
               
184-505
               

               
Cow position:
               
chr5:66297302-66296986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
5, 43
               

               
Conread position:
               
185-482
               

               
Cow position:
               
chr5:71454525-71454824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
202, 60
               

               
Conread position:
               
185-498
               

               
Cow position:
               
chr5:65601544-65601216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
69, 57
               

               
Conread position:
               
185-717
               

               
Cow position:
               
chr5:34528634-34528117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
550
               

               
Alignm identity:
               
384
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 23
               

               
Conread position:
               
187-621
               

               
Cow position:
               
chr5:46122268-46122694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
75, 129
               

               
Conread position:
               
189-717
               

               
Cow position:
               
chr5:34638967-34638432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
547
               

               
Alignm identity:
               
410
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 129
               

               
Conread position:
               
191-398
               

               
Cow position:
               
chr5:25447645-25447431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
47, 129
               

               
Conread position:
               
193-709
               

               
Cow position:
               
chr5:27155096-27154571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
392
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 78
               

               
Conread position:
               
194-497
               

               
Cow position:
               
chr5:43474923-43474604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
39, 22
               

               
Conread position:
               
195-397
               

               
Cow position:
               
chr5:38647431-38647227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
79, 32
               

               
Conread position:
               
198-388
               

               
Cow position:
               
chr5:6670119-6670314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
74, 124
               

               
Conread position:
               
200-481
               

               
Cow position:
               
chr5:56820189-56820487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
50, 38
               

               
Conread position:
               
210-485
               

               
Cow position:
               
chr5:40387811-40388097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
40, 14
               

               
Conread position:
               
210-486
               

               
Cow position:
               
chr5:21964351-21964059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
70, 111
               

               
Conread position:
               
210-487
               

               
Cow position:
               
chr5:40927924-40928206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
67, 39
               

               
Conread position:
               
210-672
               

               
Cow position:
               
chr5:32378908-32378453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
203, 62
               

               
Conread position:
               
210-717
               

               
Cow position:
               
chr5:64823249-64823763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 114
               

               
Conread position:
               
214-399
               

               
Cow position:
               
chr5:3627094-3627287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
57, 92
               

               
Conread position:
               
216-501
               

               
Cow position:
               
chr5:32956038-32956337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
46, 105
               

               
Conread position:
               
219-485
               

               
Cow position:
               
chr5:12709942-12709655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
43, 101
               

               
Conread position:
               
226-647
               

               
Cow position:
               
chr5:44583087-44583505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 6
               

               
Conread position:
               
229-377
               

               
Cow position:
               
chr5:55849701-55849852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
32, 89
               

               
Conread position:
               
229-487
               

               
Cow position:
               
chr5:37713851-37714138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
29, 93
               

               
Conread position:
               
229-567
               

               
Cow position:
               
chr5:4797280-4797624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
155, 43
               

               
Conread position:
               
229-717
               

               
Cow position:
               
chr5:6086517-6087025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 89
               

               
Conread position:
               
229-728
               

               
Cow position:
               
chr5:27015723-27015221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 71
               

               
Conread position:
               
230-585
               

               
Cow position:
               
chr5:34916173-34915812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 64
               

               
Conread position:
               
233-485
               

               
Cow position:
               
chr5:8994526-8994797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
36, 86
               

               
Conread position:
               
236-487
               

               
Cow position:
               
chr5:45037050-45036787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
53, 29
               

               
Conread position:
               
247-613
               

               
Cow position:
               
chr5:34288450-34288825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 10
               

               
Conread position:
               
257-642
               

               
Cow position:
               
chr5:31020125-31020500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 38
               

               
Conread position:
               
259-463
               

               
Cow position:
               
chr5:29212953-29212739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
21, 50
               

               
Conread position:
               
259-728
               

               
Cow position:
               
chr5:34115662-34115170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 59
               

               
Conread position:
               
263-490
               

               
Cow position:
               
chr5:9859710-9859954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
122, 51
               

               
Conread position:
               
263-493
               

               
Cow position:
               
chr5:30638858-30639089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
99, 47
               

               
Conread position:
               
263-717
               

               
Cow position:
               
chr5:24485433-24485875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 9
               

               
Conread position:
               
267-549
               

               
Cow position:
               
chr5:59443252-59443544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
10, 20
               

               
Conread position:
               
267-556
               

               
Cow position:
               
chr5:72150249-72149951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
16, 51
               

               
Conread position:
               
268-594
               

               
Cow position:
               
chr5:60520162-60519837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 47
               

               
Conread position:
               
272-399
               

               
Cow position:
               
chr5:56433801-56433670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
8, 42
               

               
Conread position:
               
272-495
               

               
Cow position:
               
chr5:73253088-73252855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
5, 43
               

               
Conread position:
               
272-695
               

               
Cow position:
               
chr5:49559162-49558723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 22
               

               
Conread position:
               
272-716
               

               
Cow position:
               
chr5:12640241-12640689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 42
               

               
Conread position:
               
272-717
               

               
Cow position:
               
chr5:62826759-62827215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 41
               

               
Conread position:
               
277-460
               

               
Cow position:
               
chr5:72845789-72845979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
12, 38
               

               
Conread position:
               
277-542
               

               
Cow position:
               
chr5:50950544-50950267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
110, 37
               

               
Conread position:
               
277-717
               

               
Cow position:
               
chr5:16185077-16184631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 37
               

               
Conread position:
               
286-477
               

               
Cow position:
               
chr5:5848208-5848410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
288-620
               

               
Cow position:
               
chr5:14538679-14539013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 27
               

               
Conread position:
               
289-714
               

               
Cow position:
               
chr5:33467064-33467505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
47, 25
               

               
Conread position:
               
294-668
               

               
Cow position:
               
chr5:12672057-12672437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 18
               

               
Conread position:
               
294-728
               

               
Cow position:
               
chr5:46103967-46104419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 21
               

               
Conread position:
               
295-496
               

               
Cow position:
               
chr5:48178705-48178918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
90, 21
               

               
Conread position:
               
313-487
               

               
Cow position:
               
chr5:24642771-24642955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
313-728
               

               
Cow position:
               
chr5:64844167-64844591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 16
               

               
Conread position:
               
319-496
               

               
Cow position:
               
chr5:39418840-39419025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
68, 29
               

               
Conread position:
               
326-484
               

               
Cow position:
               
chr5:57156717-57156558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
348-717
               

               
Cow position:
               
chr5:34923193-34923586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
355-716
               

               
Cow position:
               
chr5:26335203-26335584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
33, 192
               

               
Conread position:
               
380-717
               

               
Cow position:
               
chr5:34192820-34192485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
18, 92
               
Show alignments to all cow chromosomes.