Cow genome map

Conread name: Spl1-SPL01E050073

Conread position: 11-399
Cow position: chr6:62670139-62669754 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 262
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 116, 47

Conread position: 22-674
Cow position: chr6:33302654-33302007 (view UCSC Genome Browser custom track)
Alignm length: 671
Alignm identity: 469
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 32

Conread position: 29-283
Cow position: chr6:67451117-67451367 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 179
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 29, 16

Conread position: 34-556
Cow position: chr6:6201679-6201162 (view UCSC Genome Browser custom track)
Alignm length: 540
Alignm identity: 351
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 77, 232

Conread position: 35-253
Cow position: chr6:5601946-5601735 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 154
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 27, 75

Conread position: 35-284
Cow position: chr6:42035015-42034775 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 177
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 27, 19

Conread position: 35-325
Cow position: chr6:2078572-2078863 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 214
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 10, 29

Conread position: 35-328
Cow position: chr6:3351275-3350973 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 212
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 5, 71

Conread position: 35-348
Cow position: chr6:23353802-23353487 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 213
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 27, 138

Conread position: 35-366
Cow position: chr6:13565331-13565000 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 219
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 16, 24

Conread position: 35-374
Cow position: chr6:52478165-52478506 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 91

Conread position: 35-388
Cow position: chr6:23401749-23402095 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 236
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 27, 71

Conread position: 35-397
Cow position: chr6:5330665-5330306 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 250
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 14, 96

Conread position: 35-399
Cow position: chr6:11247015-11246643 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 251
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 20, 83

Conread position: 35-399
Cow position: chr6:46282746-46283116 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 249
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 18, 297

Conread position: 35-404
Cow position: chr6:25614844-25615227 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 271
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 27, 72

Conread position: 35-487
Cow position: chr6:15300594-15301036 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 316
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 27, 74

Conread position: 35-487
Cow position: chr6:55282046-55282508 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 30

Conread position: 35-495
Cow position: chr6:51581008-51581486 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 78

Conread position: 35-505
Cow position: chr6:68376065-68376539 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 325
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 21, 68

Conread position: 35-542
Cow position: chr6:54365087-54365595 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 12

Conread position: 35-717
Cow position: chr6:13687570-13688258 (view UCSC Genome Browser custom track)
Alignm length: 714
Alignm identity: 520
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 103

Conread position: 35-728
Cow position: chr6:67187930-67187238 (view UCSC Genome Browser custom track)
Alignm length: 717
Alignm identity: 476
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 77

Conread position: 36-344
Cow position: chr6:14166448-14166762 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 202
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 80, 251

Conread position: 36-386
Cow position: chr6:60273767-60274110 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 251
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 152, 18

Conread position: 36-399
Cow position: chr6:44566670-44566296 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 249
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 26, 18

Conread position: 36-443
Cow position: chr6:59798893-59798493 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 280
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 115, 37

Conread position: 36-451
Cow position: chr6:12669342-12668921 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 287
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 26, 18

Conread position: 36-463
Cow position: chr6:21456432-21456885 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 311
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 26, 134

Conread position: 36-470
Cow position: chr6:10399663-10400097 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 304
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 22, 130

Conread position: 36-485
Cow position: chr6:38441425-38440965 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 306
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 26, 131

Conread position: 36-485
Cow position: chr6:50090889-50090423 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 311
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 115, 66

Conread position: 36-490
Cow position: chr6:13040698-13040230 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 331
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 26, 53

Conread position: 36-714
Cow position: chr6:27239762-27240407 (view UCSC Genome Browser custom track)
Alignm length: 686
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 13

Conread position: 36-728
Cow position: chr6:13367527-13366841 (view UCSC Genome Browser custom track)
Alignm length: 712
Alignm identity: 480
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 73

Conread position: 37-360
Cow position: chr6:33510032-33509712 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 215
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 27, 11

Conread position: 37-399
Cow position: chr6:17313981-17313614 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 245
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 216, 85

Conread position: 37-400
Cow position: chr6:15243505-15243135 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 38

Conread position: 37-498
Cow position: chr6:34251055-34251505 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 298
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 27, 17

Conread position: 37-516
Cow position: chr6:15243083-15242588 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 79

Conread position: 38-282
Cow position: chr6:29775861-29775626 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 171
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 27, 132

Conread position: 38-399
Cow position: chr6:45388562-45388210 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 240
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 210, 10

Conread position: 39-385
Cow position: chr6:59602973-59603310 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 247
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 23, 70

Conread position: 39-399
Cow position: chr6:5113803-5114165 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 251
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 16, 93

Conread position: 39-728
Cow position: chr6:15937610-15938302 (view UCSC Genome Browser custom track)
Alignm length: 713
Alignm identity: 477
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 91

Conread position: 40-407
Cow position: chr6:6965154-6965515 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 254
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 22, 31

Conread position: 40-551
Cow position: chr6:21535281-21534778 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 69

Conread position: 40-618
Cow position: chr6:35989997-35990574 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 73

Conread position: 40-646
Cow position: chr6:55609987-55610614 (view UCSC Genome Browser custom track)
Alignm length: 633
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 68

Conread position: 40-667
Cow position: chr6:11192239-11192847 (view UCSC Genome Browser custom track)
Alignm length: 637
Alignm identity: 465
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 75

Conread position: 40-667
Cow position: chr6:56850258-56849599 (view UCSC Genome Browser custom track)
Alignm length: 672
Alignm identity: 457
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 59

Conread position: 40-717
Cow position: chr6:32122136-32121449 (view UCSC Genome Browser custom track)
Alignm length: 716
Alignm identity: 526
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 69

Conread position: 41-284
Cow position: chr6:21470193-21470426 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 173
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 145, 74

Conread position: 41-474
Cow position: chr6:6098009-6098488 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 325
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 20, 118

Conread position: 42-304
Cow position: chr6:26155388-26155128 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 184
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 14, 77

Conread position: 42-490
Cow position: chr6:46859932-46860389 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 61

Conread position: 42-504
Cow position: chr6:60143960-60144412 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 67

Conread position: 51-286
Cow position: chr6:1870966-1871197 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 170
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 11, 62

Conread position: 54-305
Cow position: chr6:62056838-62056588 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 179
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 11, 52

Conread position: 56-312
Cow position: chr6:60265943-60266213 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 190
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 8, 0

Conread position: 58-487
Cow position: chr6:66434176-66433729 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 297
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 123, 64

Conread position: 58-525
Cow position: chr6:3952743-3952268 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 62

Conread position: 60-385
Cow position: chr6:54035920-54036238 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 224
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 84, 47

Conread position: 60-622
Cow position: chr6:35842880-35842309 (view UCSC Genome Browser custom track)
Alignm length: 585
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 56

Conread position: 61-236
Cow position: chr6:60186435-60186613 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 125
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 72, 0

Conread position: 61-241
Cow position: chr6:21350812-21350988 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 133
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 51, 0

Conread position: 61-241
Cow position: chr6:36537144-36537316 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 133
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 125, 41

Conread position: 61-248
Cow position: chr6:21083322-21083503 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 138
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 125, 50

Conread position: 61-252
Cow position: chr6:3937006-3936818 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 139
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 125, 76

Conread position: 61-259
Cow position: chr6:12761499-12761306 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 147
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 16, 0

Conread position: 61-283
Cow position: chr6:61110001-61109790 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 156
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 47, 0

Conread position: 61-283
Cow position: chr6:63066056-63065829 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 169
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 78, 0

Conread position: 61-298
Cow position: chr6:58725586-58725358 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 169
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 127, 66

Conread position: 61-325
Cow position: chr6:50504675-50504409 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 193
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 127, 47

Conread position: 61-344
Cow position: chr6:18117832-18118114 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 204
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 125, 40

Conread position: 61-358
Cow position: chr6:693926-694223 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 222
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 110, 64

Conread position: 61-385
Cow position: chr6:48988653-48988334 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 214
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 83, 49

Conread position: 61-387
Cow position: chr6:19264282-19264601 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 14

Conread position: 61-387
Cow position: chr6:19446472-19446154 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 219
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 127, 45

Conread position: 61-397
Cow position: chr6:22850033-22850363 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 227
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 88, 46

Conread position: 61-398
Cow position: chr6:55209779-55209441 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 223
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 92, 50

Conread position: 61-399
Cow position: chr6:7128185-7128520 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 252
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 127, 50

Conread position: 61-399
Cow position: chr6:10225431-10225755 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 240
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 58, 81

Conread position: 61-399
Cow position: chr6:38610193-38609848 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 238
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 73, 62

Conread position: 61-399
Cow position: chr6:47356045-47355708 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 234
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 197, 35

Conread position: 61-400
Cow position: chr6:21399535-21399874 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 224
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 86, 25

Conread position: 61-406
Cow position: chr6:19996834-19996492 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 245
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 97, 41

Conread position: 61-420
Cow position: chr6:19293017-19292660 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 252
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 125, 47

Conread position: 61-421
Cow position: chr6:59719030-59718659 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 246
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 70, 161

Conread position: 61-459
Cow position: chr6:63251702-63252114 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 276
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 111, 41

Conread position: 61-463
Cow position: chr6:6401184-6400753 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 17

Conread position: 61-463
Cow position: chr6:52413081-52412659 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 285
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 85, 38

Conread position: 61-464
Cow position: chr6:32268668-32269066 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 271
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 125, 46

Conread position: 61-466
Cow position: chr6:12091767-12092182 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 278
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 67, 58

Conread position: 61-467
Cow position: chr6:55545953-55546359 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 264
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 92, 46

Conread position: 61-471
Cow position: chr6:66131538-66131105 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 297
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 70, 169

Conread position: 61-480
Cow position: chr6:53024592-53025010 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 296
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 127, 47

Conread position: 61-482
Cow position: chr6:59620875-59620455 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 291
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 87, 46

Conread position: 61-483
Cow position: chr6:17997098-17997530 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 47

Conread position: 61-487
Cow position: chr6:24110503-24110085 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 276
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 126, 47

Conread position: 61-487
Cow position: chr6:36203040-36202609 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 52

Conread position: 61-490
Cow position: chr6:41733854-41733405 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 304
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 123, 54

Conread position: 61-492
Cow position: chr6:38207267-38207719 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 16

Conread position: 61-495
Cow position: chr6:24468180-24468617 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 47

Conread position: 61-496
Cow position: chr6:4383693-4383265 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 51

Conread position: 61-496
Cow position: chr6:67951176-67950731 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 9

Conread position: 61-508
Cow position: chr6:9736426-9736879 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 158

Conread position: 61-513
Cow position: chr6:38853437-38853903 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 47

Conread position: 61-514
Cow position: chr6:53460352-53460816 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 48

Conread position: 61-542
Cow position: chr6:48282214-48281723 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 335
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 82, 42

Conread position: 61-550
Cow position: chr6:22332176-22332678 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 325
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 67, 41

Conread position: 61-559
Cow position: chr6:7130642-7131160 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 220

Conread position: 61-570
Cow position: chr6:47520273-47519751 (view UCSC Genome Browser custom track)
Alignm length: 537
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 45

Conread position: 61-578
Cow position: chr6:611762-611260 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 357
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 127, 47

Conread position: 61-581
Cow position: chr6:46558273-46557747 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 47

Conread position: 61-584
Cow position: chr6:12338209-12337671 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 58

Conread position: 61-584
Cow position: chr6:60859079-60859617 (view UCSC Genome Browser custom track)
Alignm length: 550
Alignm identity: 360
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 92, 46

Conread position: 61-604
Cow position: chr6:28483236-28482680 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 41

Conread position: 61-618
Cow position: chr6:47305561-47304980 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 49

Conread position: 61-619
Cow position: chr6:15305790-15305240 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 47

Conread position: 61-630
Cow position: chr6:31535354-31535916 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 76

Conread position: 61-660
Cow position: chr6:45690399-45690999 (view UCSC Genome Browser custom track)
Alignm length: 634
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 11

Conread position: 61-678
Cow position: chr6:32126271-32125659 (view UCSC Genome Browser custom track)
Alignm length: 635
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 226, 62

Conread position: 61-693
Cow position: chr6:65871250-65870604 (view UCSC Genome Browser custom track)
Alignm length: 665
Alignm identity: 484
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 39

Conread position: 61-695
Cow position: chr6:29485302-29484687 (view UCSC Genome Browser custom track)
Alignm length: 652
Alignm identity: 470
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 50

Conread position: 61-705
Cow position: chr6:46466037-46465393 (view UCSC Genome Browser custom track)
Alignm length: 658
Alignm identity: 480
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 50

Conread position: 61-707
Cow position: chr6:35181035-35181684 (view UCSC Genome Browser custom track)
Alignm length: 669
Alignm identity: 470
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 49

Conread position: 61-710
Cow position: chr6:32867002-32867645 (view UCSC Genome Browser custom track)
Alignm length: 667
Alignm identity: 482
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 36

Conread position: 61-713
Cow position: chr6:53932626-53933290 (view UCSC Genome Browser custom track)
Alignm length: 675
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 47

Conread position: 61-719
Cow position: chr6:143159-143807 (view UCSC Genome Browser custom track)
Alignm length: 672
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 47

Conread position: 61-721
Cow position: chr6:51835617-51834952 (view UCSC Genome Browser custom track)
Alignm length: 684
Alignm identity: 477
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 43

Conread position: 61-728
Cow position: chr6:18447296-18447971 (view UCSC Genome Browser custom track)
Alignm length: 690
Alignm identity: 469
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 54

Conread position: 61-729
Cow position: chr6:5302183-5302858 (view UCSC Genome Browser custom track)
Alignm length: 693
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 161

Conread position: 61-731
Cow position: chr6:39358124-39358792 (view UCSC Genome Browser custom track)
Alignm length: 698
Alignm identity: 500
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 47

Conread position: 62-225
Cow position: chr6:19936350-19936509 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 120
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 125, 44

Conread position: 62-302
Cow position: chr6:21293280-21293518 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 180
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 162, 40

Conread position: 62-339
Cow position: chr6:60517056-60516769 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 198
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 49, 92

Conread position: 62-405
Cow position: chr6:32287849-32287512 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 49

Conread position: 62-463
Cow position: chr6:63720410-63720004 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 293
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 126, 41

Conread position: 62-485
Cow position: chr6:5609224-5609657 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 49

Conread position: 62-520
Cow position: chr6:54133029-54132567 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 34

Conread position: 63-608
Cow position: chr6:36196419-36195876 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 13

Conread position: 64-308
Cow position: chr6:36920759-36921002 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 179
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 122, 42

Conread position: 64-387
Cow position: chr6:31814530-31814842 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 211
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 86, 46

Conread position: 64-474
Cow position: chr6:38641710-38641292 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 41

Conread position: 65-330
Cow position: chr6:68816386-68816118 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 191
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 121, 72

Conread position: 68-410
Cow position: chr6:1704009-1703691 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 228
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 120, 43

Conread position: 68-717
Cow position: chr6:8637489-8636829 (view UCSC Genome Browser custom track)
Alignm length: 676
Alignm identity: 486
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 40

Conread position: 69-604
Cow position: chr6:44078726-44078183 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 39

Conread position: 70-385
Cow position: chr6:61168975-61168672 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 201

Conread position: 70-498
Cow position: chr6:26915538-26915100 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 38

Conread position: 70-629
Cow position: chr6:2547465-2546885 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 38

Conread position: 71-310
Cow position: chr6:48097391-48097631 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 179
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 114, 37

Conread position: 71-399
Cow position: chr6:50984434-50984108 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 225
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 119, 57

Conread position: 71-399
Cow position: chr6:57546017-57546334 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 223
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 115, 52

Conread position: 71-456
Cow position: chr6:50577727-50577332 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 286
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 117, 34

Conread position: 71-496
Cow position: chr6:44194344-44194773 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 36

Conread position: 71-630
Cow position: chr6:10105771-10106360 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 39

Conread position: 71-714
Cow position: chr6:17414238-17414897 (view UCSC Genome Browser custom track)
Alignm length: 673
Alignm identity: 501
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 23

Conread position: 71-717
Cow position: chr6:5095330-5095997 (view UCSC Genome Browser custom track)
Alignm length: 680
Alignm identity: 472
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 51

Conread position: 72-343
Cow position: chr6:60468444-60468176 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 199
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 59, 90

Conread position: 76-385
Cow position: chr6:21514402-21514722 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 213
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 112, 21

Conread position: 77-391
Cow position: chr6:61524001-61524310 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 226
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 109, 34

Conread position: 77-399
Cow position: chr6:38640437-38640111 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 234
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 111, 33

Conread position: 77-628
Cow position: chr6:61269514-61268977 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 26

Conread position: 77-714
Cow position: chr6:18954884-18955477 (view UCSC Genome Browser custom track)
Alignm length: 642
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 29

Conread position: 77-717
Cow position: chr6:23696202-23695551 (view UCSC Genome Browser custom track)
Alignm length: 664
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 26

Conread position: 78-330
Cow position: chr6:31078666-31078920 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 183
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 110, 33

Conread position: 78-711
Cow position: chr6:9750835-9751490 (view UCSC Genome Browser custom track)
Alignm length: 668
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 144

Conread position: 79-399
Cow position: chr6:57571679-57571357 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 235
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 109, 35

Conread position: 79-654
Cow position: chr6:61631404-61631997 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 42

Conread position: 80-659
Cow position: chr6:6060370-6060946 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 31

Conread position: 86-711
Cow position: chr6:46571304-46570685 (view UCSC Genome Browser custom track)
Alignm length: 640
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 13

Conread position: 94-405
Cow position: chr6:48112382-48112076 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 20

Conread position: 103-496
Cow position: chr6:60350105-60350527 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 219

Conread position: 104-717
Cow position: chr6:21590889-21590280 (view UCSC Genome Browser custom track)
Alignm length: 640
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 34

Conread position: 105-685
Cow position: chr6:40774152-40774784 (view UCSC Genome Browser custom track)
Alignm length: 638
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 41

Conread position: 107-602
Cow position: chr6:10176123-10176630 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 5

Conread position: 108-617
Cow position: chr6:66531643-66532149 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 97

Conread position: 109-732
Cow position: chr6:36652599-36651962 (view UCSC Genome Browser custom track)
Alignm length: 654
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 29

Conread position: 111-371
Cow position: chr6:37332285-37332018 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 199
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 77, 30

Conread position: 111-385
Cow position: chr6:582099-582374 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 196
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 47, 37

Conread position: 111-385
Cow position: chr6:58597332-58597607 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 210
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 78, 20

Conread position: 111-399
Cow position: chr6:21235217-21234924 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 206
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 77, 32

Conread position: 111-456
Cow position: chr6:47799469-47799110 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 243
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 75, 209

Conread position: 111-495
Cow position: chr6:21869475-21869872 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 29

Conread position: 112-350
Cow position: chr6:9302547-9302784 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 172
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 76, 34

Conread position: 112-361
Cow position: chr6:23465860-23466108 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 181
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 46, 29

Conread position: 112-399
Cow position: chr6:1499821-1499522 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 213
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 22, 63

Conread position: 112-399
Cow position: chr6:35993758-35993461 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 211
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 76, 49

Conread position: 112-717
Cow position: chr6:8209431-8210028 (view UCSC Genome Browser custom track)
Alignm length: 623
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 30

Conread position: 113-486
Cow position: chr6:16423882-16423481 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 214

Conread position: 113-611
Cow position: chr6:54867691-54867178 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 210

Conread position: 115-475
Cow position: chr6:7989248-7989620 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 256
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 71, 17

Conread position: 116-511
Cow position: chr6:54990832-54991235 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 279
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 72, 24

Conread position: 116-717
Cow position: chr6:222287-222885 (view UCSC Genome Browser custom track)
Alignm length: 616
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 25

Conread position: 117-325
Cow position: chr6:30024053-30023849 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 154
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 71, 23

Conread position: 117-356
Cow position: chr6:17068479-17068723 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 175
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 70, 21

Conread position: 117-450
Cow position: chr6:47575072-47574723 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 15

Conread position: 117-467
Cow position: chr6:59069450-59069827 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 249
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 69, 202

Conread position: 117-716
Cow position: chr6:40032360-40031748 (view UCSC Genome Browser custom track)
Alignm length: 625
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 111

Conread position: 119-406
Cow position: chr6:65264378-65264663 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 189
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 34, 54

Conread position: 119-470
Cow position: chr6:528117-528478 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 247
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 69, 19

Conread position: 119-622
Cow position: chr6:26728368-26728878 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 18

Conread position: 121-325
Cow position: chr6:1422652-1422442 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 144
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 67, 0

Conread position: 122-359
Cow position: chr6:22985690-22985935 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 178
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 17, 37

Conread position: 122-484
Cow position: chr6:53652203-53651824 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 24

Conread position: 122-485
Cow position: chr6:8966260-8965873 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 282
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 66, 18

Conread position: 122-709
Cow position: chr6:38771443-38770864 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 18

Conread position: 123-676
Cow position: chr6:49398456-49399023 (view UCSC Genome Browser custom track)
Alignm length: 572
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 129

Conread position: 123-728
Cow position: chr6:36470398-36471025 (view UCSC Genome Browser custom track)
Alignm length: 633
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 200

Conread position: 124-485
Cow position: chr6:21111112-21110752 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 250
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 64, 19

Conread position: 125-399
Cow position: chr6:60667571-60667301 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 188
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 63, 13

Conread position: 125-482
Cow position: chr6:9452610-9452983 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 261
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 57, 15

Conread position: 125-562
Cow position: chr6:34195989-34196440 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 303
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 57, 24

Conread position: 127-661
Cow position: chr6:9008453-9008990 (view UCSC Genome Browser custom track)
Alignm length: 554
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 15

Conread position: 128-399
Cow position: chr6:50976207-50975942 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 197
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 60, 185

Conread position: 128-658
Cow position: chr6:24004695-24004153 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 145

Conread position: 129-377
Cow position: chr6:66375177-66375425 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 186
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 59, 17

Conread position: 132-400
Cow position: chr6:52901393-52901117 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 187
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 60, 194

Conread position: 132-705
Cow position: chr6:28976885-28977484 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 191

Conread position: 133-556
Cow position: chr6:38218819-38218378 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 9

Conread position: 135-321
Cow position: chr6:32516958-32517139 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 134
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 53, 30

Conread position: 140-497
Cow position: chr6:49002593-49002953 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 253
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 48, 69

Conread position: 141-399
Cow position: chr6:28999794-29000042 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 183
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 45, 14

Conread position: 145-467
Cow position: chr6:21231666-21231337 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 173

Conread position: 148-317
Cow position: chr6:32853326-32853150 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 131
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 40, 66

Conread position: 148-407
Cow position: chr6:47640293-47640561 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 173

Conread position: 148-507
Cow position: chr6:20097820-20098203 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 177

Conread position: 148-651
Cow position: chr6:14958201-14958723 (view UCSC Genome Browser custom track)
Alignm length: 534
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 180

Conread position: 148-695
Cow position: chr6:56843293-56842735 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 61

Conread position: 148-711
Cow position: chr6:24031515-24030934 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 61

Conread position: 148-717
Cow position: chr6:4864408-4864982 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 173

Conread position: 148-728
Cow position: chr6:35613278-35613868 (view UCSC Genome Browser custom track)
Alignm length: 625
Alignm identity: 422
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 40, 182

Conread position: 163-487
Cow position: chr6:899169-899503 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 155

Conread position: 165-495
Cow position: chr6:66874473-66874135 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 79

Conread position: 165-557
Cow position: chr6:57164551-57164140 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 283
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 23, 86

Conread position: 172-409
Cow position: chr6:377240-377001 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 164
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 16, 116

Conread position: 172-461
Cow position: chr6:28318512-28318216 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 209
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 16, 38

Conread position: 173-399
Cow position: chr6:61608626-61608395 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 180
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 15, 147

Conread position: 174-481
Cow position: chr6:56376236-56376560 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 220
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 88, 148

Conread position: 178-373
Cow position: chr6:17245504-17245697 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 143
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 9, 79

Conread position: 184-399
Cow position: chr6:12542828-12543049 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 161
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 81, 138

Conread position: 184-505
Cow position: chr6:130061-130401 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 45

Conread position: 185-349
Cow position: chr6:7170247-7170414 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 123
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 33, 132

Conread position: 185-678
Cow position: chr6:17090700-17090178 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 44

Conread position: 185-711
Cow position: chr6:29210596-29210059 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 58

Conread position: 185-711
Cow position: chr6:48170039-48169504 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 85

Conread position: 185-717
Cow position: chr6:18988309-18987775 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 31

Conread position: 188-344
Cow position: chr6:67615332-67615493 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 120
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 71, 133

Conread position: 189-516
Cow position: chr6:20330105-20329773 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 231
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 198, 61

Conread position: 189-556
Cow position: chr6:54368807-54369182 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 270
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 89, 100

Conread position: 189-683
Cow position: chr6:62924899-62925413 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 131

Conread position: 196-397
Cow position: chr6:12829135-12829340 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 156
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 65, 106

Conread position: 196-480
Cow position: chr6:57405035-57405336 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 216
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 60, 49

Conread position: 196-481
Cow position: chr6:24962235-24961932 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 220
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 34, 125

Conread position: 196-640
Cow position: chr6:52248042-52248492 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 316
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 84, 282

Conread position: 196-642
Cow position: chr6:1944803-1944358 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 33

Conread position: 199-385
Cow position: chr6:37376427-37376620 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 145
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 80, 130

Conread position: 207-523
Cow position: chr6:2832799-2833130 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 226
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 28, 55

Conread position: 210-493
Cow position: chr6:21542399-21542095 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 219
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 52, 112

Conread position: 213-717
Cow position: chr6:18961442-18961967 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 108

Conread position: 213-734
Cow position: chr6:28477242-28476702 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 53

Conread position: 216-717
Cow position: chr6:49410627-49411123 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 81

Conread position: 217-695
Cow position: chr6:38234028-38233568 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 103

Conread position: 218-710
Cow position: chr6:12630088-12629579 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 11

Conread position: 219-620
Cow position: chr6:8318093-8318516 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 101

Conread position: 227-485
Cow position: chr6:6460601-6460325 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 209
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 50, 92

Conread position: 229-487
Cow position: chr6:34031718-34031449 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 201
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 40, 91

Conread position: 245-496
Cow position: chr6:37054038-37053787 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 174
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 79, 33

Conread position: 247-717
Cow position: chr6:16411223-16410757 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 23

Conread position: 247-731
Cow position: chr6:9732807-9733292 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 69

Conread position: 251-490
Cow position: chr6:45160263-45160513 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 183
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 40, 64

Conread position: 252-487
Cow position: chr6:10636203-10635958 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 184
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 72, 20

Conread position: 254-508
Cow position: chr6:40138692-40138945 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 14

Conread position: 260-497
Cow position: chr6:32335823-32335588 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 174
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 29, 45

Conread position: 263-496
Cow position: chr6:55143082-55143320 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 161
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 97, 52

Conread position: 269-486
Cow position: chr6:15922987-15923215 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 174
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 118, 45

Conread position: 274-710
Cow position: chr6:12387318-12387765 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 40

Conread position: 274-725
Cow position: chr6:32915915-32916374 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 42

Conread position: 278-717
Cow position: chr6:2013022-2012576 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 36

Conread position: 278-728
Cow position: chr6:32210625-32211083 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 36

Conread position: 278-728
Cow position: chr6:61575612-61575135 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 36

Conread position: 288-471
Cow position: chr6:48425328-48425524 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 142
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 68, 26

Conread position: 288-483
Cow position: chr6:66453792-66453586 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 149
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 98, 20

Conread position: 288-498
Cow position: chr6:2423736-2423519 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 155
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 63, 21

Conread position: 288-645
Cow position: chr6:8804537-8804918 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 27

Conread position: 288-678
Cow position: chr6:24327148-24327549 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 27

Conread position: 288-715
Cow position: chr6:58076222-58075777 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 16

Conread position: 294-716
Cow position: chr6:65910461-65910029 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 20

Conread position: 295-487
Cow position: chr6:9026504-9026298 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 154
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 41, 17

Conread position: 296-490
Cow position: chr6:389155-388949 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 153
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 89, 18

Conread position: 304-567
Cow position: chr6:19508463-19508728 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 188
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 68, 13

Conread position: 313-496
Cow position: chr6:66057602-66057424 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 133
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 60, 0

Conread position: 321-683
Cow position: chr6:10649063-10649437 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 64

Conread position: 323-596
Cow position: chr6:12934180-12934465 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 200
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 67, 210

Conread position: 342-717
Cow position: chr6:25784252-25783859 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 121

Conread position: 364-669
Cow position: chr6:1866590-1866282 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 144

Show alignments to all cow chromosomes.