Cow genome map

Conread name: Spl1-SPL01E050073

Conread position: 26-360
Cow position: chr9:4263272-4262946 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 218
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 160, 18

Conread position: 33-308
Cow position: chr9:17840857-17840579 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 212
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 29, 21

Conread position: 34-276
Cow position: chr9:5104587-5104344 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 167
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 102, 166

Conread position: 34-385
Cow position: chr9:40215070-40215415 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 238
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 27, 12

Conread position: 34-486
Cow position: chr9:13670459-13670924 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 313
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 154, 77

Conread position: 35-234
Cow position: chr9:5068660-5068858 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 139
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 27, 81

Conread position: 35-244
Cow position: chr9:19771183-19771393 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 155
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 27, 47

Conread position: 35-244
Cow position: chr9:59897419-59897616 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 151
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 27, 74

Conread position: 35-265
Cow position: chr9:55354416-55354659 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 171
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 65, 0

Conread position: 35-283
Cow position: chr9:57131321-57131559 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 178
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 23, 43

Conread position: 35-300
Cow position: chr9:34024522-34024789 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 192
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 27, 86

Conread position: 35-338
Cow position: chr9:6189543-6189247 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 220
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 21, 10

Conread position: 35-398
Cow position: chr9:9573143-9573520 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 251
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 34, 77

Conread position: 35-399
Cow position: chr9:4341333-4340981 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 69

Conread position: 35-434
Cow position: chr9:35028344-35027938 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 284
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 27, 66

Conread position: 35-461
Cow position: chr9:34375103-34374667 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 19

Conread position: 35-467
Cow position: chr9:33597797-33598249 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 11

Conread position: 35-487
Cow position: chr9:20579765-20579338 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 297
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 27, 68

Conread position: 35-490
Cow position: chr9:20090882-20091329 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 39

Conread position: 35-529
Cow position: chr9:10118843-10118336 (view UCSC Genome Browser custom track)
Alignm length: 517
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 112

Conread position: 35-582
Cow position: chr9:45141777-45141246 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 78

Conread position: 35-658
Cow position: chr9:8998176-8998810 (view UCSC Genome Browser custom track)
Alignm length: 652
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 52

Conread position: 35-707
Cow position: chr9:55795581-55796241 (view UCSC Genome Browser custom track)
Alignm length: 702
Alignm identity: 465
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 73

Conread position: 36-399
Cow position: chr9:19067593-19067968 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 268
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 26, 141

Conread position: 36-399
Cow position: chr9:52638346-52637971 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 258
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 26, 72

Conread position: 36-399
Cow position: chr9:58448301-58447938 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 236
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 26, 18

Conread position: 36-457
Cow position: chr9:58979229-58979659 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 308
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 26, 84

Conread position: 36-502
Cow position: chr9:10144658-10144170 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 14

Conread position: 36-567
Cow position: chr9:6397961-6397422 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 18

Conread position: 37-235
Cow position: chr9:40984329-40984523 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 144
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 25, 72

Conread position: 37-717
Cow position: chr9:28772967-28773634 (view UCSC Genome Browser custom track)
Alignm length: 694
Alignm identity: 504
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 17

Conread position: 38-444
Cow position: chr9:43757371-43757768 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 293
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 24, 10

Conread position: 38-514
Cow position: chr9:55256723-55256235 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 71

Conread position: 38-697
Cow position: chr9:61022446-61023104 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 480
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 78

Conread position: 39-517
Cow position: chr9:13169838-13169355 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 70

Conread position: 40-371
Cow position: chr9:11098623-11098327 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 227
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 22, 69

Conread position: 40-383
Cow position: chr9:50202382-50202739 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 232
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 22, 275

Conread position: 40-385
Cow position: chr9:25556811-25557137 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 241
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 22, 69

Conread position: 40-405
Cow position: chr9:1937931-1938323 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 273
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 22, 296

Conread position: 40-480
Cow position: chr9:1751157-1751616 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 47

Conread position: 40-481
Cow position: chr9:41282839-41283310 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 320
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 7, 76

Conread position: 40-496
Cow position: chr9:32307406-32306943 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 316
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 22, 90

Conread position: 40-515
Cow position: chr9:26345134-26344669 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 68

Conread position: 40-564
Cow position: chr9:33219132-33218590 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 110

Conread position: 41-399
Cow position: chr9:33120060-33119697 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 27

Conread position: 41-479
Cow position: chr9:24887034-24887477 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 74

Conread position: 42-241
Cow position: chr9:40603497-40603692 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 140
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 20, 66

Conread position: 42-371
Cow position: chr9:52267932-52267599 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 234
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 11, 168

Conread position: 54-677
Cow position: chr9:8936990-8937625 (view UCSC Genome Browser custom track)
Alignm length: 647
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 58

Conread position: 55-659
Cow position: chr9:9551936-9552543 (view UCSC Genome Browser custom track)
Alignm length: 627
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 24

Conread position: 55-717
Cow position: chr9:23388836-23388163 (view UCSC Genome Browser custom track)
Alignm length: 688
Alignm identity: 505
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 88

Conread position: 58-467
Cow position: chr9:9753556-9753128 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 103

Conread position: 58-487
Cow position: chr9:17872260-17871820 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 50

Conread position: 60-385
Cow position: chr9:8901379-8901052 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 221
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 128, 8

Conread position: 61-237
Cow position: chr9:1712858-1712686 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 128
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 125, 47

Conread position: 61-243
Cow position: chr9:12773544-12773716 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 138
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 125, 47

Conread position: 61-243
Cow position: chr9:34707460-34707286 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 137
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 46, 0

Conread position: 61-257
Cow position: chr9:27345739-27345544 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 137
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 57, 86

Conread position: 61-258
Cow position: chr9:4241257-4241447 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 147
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 108, 47

Conread position: 61-260
Cow position: chr9:22165867-22165670 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 145
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 123, 70

Conread position: 61-281
Cow position: chr9:12337750-12337965 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 152
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 127, 48

Conread position: 61-281
Cow position: chr9:61351495-61351275 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 151
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 10, 87

Conread position: 61-304
Cow position: chr9:37198977-37199215 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 180
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 127, 50

Conread position: 61-312
Cow position: chr9:9459839-9460075 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 178
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 125, 46

Conread position: 61-312
Cow position: chr9:29195182-29194923 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 181
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 79, 243

Conread position: 61-312
Cow position: chr9:43159605-43159841 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 182
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 125, 11

Conread position: 61-325
Cow position: chr9:23956127-23955872 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 191
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 127, 75

Conread position: 61-330
Cow position: chr9:33584834-33584566 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 204
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 125, 50

Conread position: 61-330
Cow position: chr9:58132098-58131847 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 194
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 130, 8

Conread position: 61-331
Cow position: chr9:54492988-54493255 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 192
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 123, 52

Conread position: 61-343
Cow position: chr9:60080743-60081035 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 195
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 73, 100

Conread position: 61-350
Cow position: chr9:40005327-40005612 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 199
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 126, 14

Conread position: 61-351
Cow position: chr9:36627972-36628241 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 202
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 125, 47

Conread position: 61-353
Cow position: chr9:32815502-32815781 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 198
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 88, 55

Conread position: 61-377
Cow position: chr9:19034204-19034504 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 218
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 90, 40

Conread position: 61-384
Cow position: chr9:26477062-26477387 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 229
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 125, 62

Conread position: 61-385
Cow position: chr9:43623115-43623428 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 218
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 85, 60

Conread position: 61-385
Cow position: chr9:64105753-64106079 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 229
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 128, 47

Conread position: 61-387
Cow position: chr9:60395199-60394877 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 45

Conread position: 61-389
Cow position: chr9:12910550-12910225 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 46

Conread position: 61-397
Cow position: chr9:12226135-12225800 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 227
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 74, 107

Conread position: 61-399
Cow position: chr9:17799485-17799816 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 244
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 127, 47

Conread position: 61-399
Cow position: chr9:25804678-25805023 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 231
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 93, 46

Conread position: 61-399
Cow position: chr9:30123780-30124109 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 243
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 127, 41

Conread position: 61-399
Cow position: chr9:48627873-48628216 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 37

Conread position: 61-399
Cow position: chr9:61302853-61303192 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 47

Conread position: 61-426
Cow position: chr9:62150961-62151315 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 242
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 94, 25

Conread position: 61-461
Cow position: chr9:38846491-38846087 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 267
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 70, 149

Conread position: 61-464
Cow position: chr9:23541550-23541153 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 281
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 106, 149

Conread position: 61-466
Cow position: chr9:9596100-9595686 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 46

Conread position: 61-467
Cow position: chr9:34286648-34287062 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 47

Conread position: 61-470
Cow position: chr9:54716767-54716351 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 288
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 50, 152

Conread position: 61-471
Cow position: chr9:55117932-55118350 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 288
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 97, 61

Conread position: 61-472
Cow position: chr9:51620294-51620708 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 47

Conread position: 61-479
Cow position: chr9:55288039-55287611 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 303
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 127, 55

Conread position: 61-485
Cow position: chr9:59013488-59013049 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 309
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 127, 47

Conread position: 61-486
Cow position: chr9:56453196-56453619 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 40

Conread position: 61-487
Cow position: chr9:26279323-26278889 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 62

Conread position: 61-489
Cow position: chr9:3070567-3070133 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 296
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 56, 62

Conread position: 61-492
Cow position: chr9:18342564-18343015 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 213

Conread position: 61-492
Cow position: chr9:34689755-34689319 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 140

Conread position: 61-496
Cow position: chr9:15215840-15215384 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 54

Conread position: 61-496
Cow position: chr9:36410500-36410055 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 303
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 90, 46

Conread position: 61-498
Cow position: chr9:10010662-10011101 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 308
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 196, 54

Conread position: 61-511
Cow position: chr9:36491054-36490583 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 42

Conread position: 61-542
Cow position: chr9:6934231-6933731 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 144

Conread position: 61-552
Cow position: chr9:4268153-4267642 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 252

Conread position: 61-555
Cow position: chr9:14975079-14974573 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 50

Conread position: 61-555
Cow position: chr9:38792865-38793373 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 61

Conread position: 61-591
Cow position: chr9:34958202-34957662 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 47

Conread position: 61-598
Cow position: chr9:25964990-25964427 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 99

Conread position: 61-636
Cow position: chr9:42497678-42498263 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 39

Conread position: 61-654
Cow position: chr9:9516898-9516318 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 45

Conread position: 61-654
Cow position: chr9:56772911-56773538 (view UCSC Genome Browser custom track)
Alignm length: 634
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 158

Conread position: 61-683
Cow position: chr9:6192607-6191982 (view UCSC Genome Browser custom track)
Alignm length: 646
Alignm identity: 465
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 54

Conread position: 61-695
Cow position: chr9:20942769-20942119 (view UCSC Genome Browser custom track)
Alignm length: 664
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 44

Conread position: 61-696
Cow position: chr9:61738771-61739395 (view UCSC Genome Browser custom track)
Alignm length: 653
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 67

Conread position: 61-710
Cow position: chr9:45285689-45285035 (view UCSC Genome Browser custom track)
Alignm length: 680
Alignm identity: 500
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 63

Conread position: 61-716
Cow position: chr9:52689764-52689127 (view UCSC Genome Browser custom track)
Alignm length: 676
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 42

Conread position: 61-717
Cow position: chr9:22152232-22151588 (view UCSC Genome Browser custom track)
Alignm length: 680
Alignm identity: 473
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 44

Conread position: 61-717
Cow position: chr9:29006409-29007083 (view UCSC Genome Browser custom track)
Alignm length: 686
Alignm identity: 504
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 50

Conread position: 61-718
Cow position: chr9:20815716-20816358 (view UCSC Genome Browser custom track)
Alignm length: 665
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 49

Conread position: 61-728
Cow position: chr9:20318724-20318059 (view UCSC Genome Browser custom track)
Alignm length: 688
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 50

Conread position: 61-728
Cow position: chr9:21460303-21459635 (view UCSC Genome Browser custom track)
Alignm length: 694
Alignm identity: 498
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 24

Conread position: 61-728
Cow position: chr9:33822967-33823636 (view UCSC Genome Browser custom track)
Alignm length: 701
Alignm identity: 494
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 9

Conread position: 61-729
Cow position: chr9:28726879-28726201 (view UCSC Genome Browser custom track)
Alignm length: 698
Alignm identity: 499
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 45

Conread position: 61-729
Cow position: chr9:30402579-30401888 (view UCSC Genome Browser custom track)
Alignm length: 697
Alignm identity: 482
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 62

Conread position: 62-245
Cow position: chr9:26394497-26394322 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 139
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 124, 46

Conread position: 62-487
Cow position: chr9:52578687-52578245 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 20

Conread position: 62-518
Cow position: chr9:29824867-29825344 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 328
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 49, 154

Conread position: 62-717
Cow position: chr9:18380719-18381373 (view UCSC Genome Browser custom track)
Alignm length: 683
Alignm identity: 477
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 45

Conread position: 62-728
Cow position: chr9:28747667-28746999 (view UCSC Genome Browser custom track)
Alignm length: 686
Alignm identity: 510
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 46

Conread position: 62-729
Cow position: chr9:11299822-11299163 (view UCSC Genome Browser custom track)
Alignm length: 693
Alignm identity: 508
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 75

Conread position: 63-349
Cow position: chr9:13744082-13743797 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 189
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 123, 48

Conread position: 63-399
Cow position: chr9:56088226-56087882 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 228
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 51, 103

Conread position: 64-399
Cow position: chr9:53762552-53762886 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 236
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 122, 44

Conread position: 67-404
Cow position: chr9:41728116-41728447 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 41

Conread position: 69-399
Cow position: chr9:58614355-58614678 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 239
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 9, 40

Conread position: 69-677
Cow position: chr9:31640470-31639841 (view UCSC Genome Browser custom track)
Alignm length: 638
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 46

Conread position: 71-384
Cow position: chr9:39011610-39011306 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 231
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 117, 35

Conread position: 77-249
Cow position: chr9:43202201-43202366 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 131
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 111, 30

Conread position: 77-382
Cow position: chr9:5263368-5263669 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 226
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 197, 50

Conread position: 77-393
Cow position: chr9:9815276-9815596 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 219
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 109, 31

Conread position: 77-473
Cow position: chr9:9403309-9402911 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 31

Conread position: 77-487
Cow position: chr9:9406198-9405767 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 11

Conread position: 77-591
Cow position: chr9:13205706-13205183 (view UCSC Genome Browser custom track)
Alignm length: 539
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 41

Conread position: 77-728
Cow position: chr9:16300711-16300043 (view UCSC Genome Browser custom track)
Alignm length: 674
Alignm identity: 462
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 376

Conread position: 77-728
Cow position: chr9:17741075-17740421 (view UCSC Genome Browser custom track)
Alignm length: 672
Alignm identity: 490
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 29

Conread position: 79-267
Cow position: chr9:59699689-59699497 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 141
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 35, 0

Conread position: 79-485
Cow position: chr9:41513505-41513905 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 286
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 52, 66

Conread position: 79-697
Cow position: chr9:42446127-42445477 (view UCSC Genome Browser custom track)
Alignm length: 659
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 250

Conread position: 80-729
Cow position: chr9:29185271-29184610 (view UCSC Genome Browser custom track)
Alignm length: 674
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 49

Conread position: 81-523
Cow position: chr9:41416200-41416674 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 329
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 72, 21

Conread position: 83-492
Cow position: chr9:51204594-51205013 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 288
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 104, 7

Conread position: 90-487
Cow position: chr9:9416517-9416119 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 283
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 33, 22

Conread position: 104-358
Cow position: chr9:6596340-6596090 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 182
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 168, 28

Conread position: 104-545
Cow position: chr9:9199891-9199441 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 316
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 116, 36

Conread position: 104-695
Cow position: chr9:30477887-30477282 (view UCSC Genome Browser custom track)
Alignm length: 622
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 34

Conread position: 107-456
Cow position: chr9:3782255-3782620 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 257
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 15, 66

Conread position: 107-488
Cow position: chr9:11319745-11319355 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 255
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 81, 196

Conread position: 109-570
Cow position: chr9:62357639-62357159 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 102

Conread position: 111-399
Cow position: chr9:767257-766964 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 208
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 26, 61

Conread position: 111-711
Cow position: chr9:5433527-5434121 (view UCSC Genome Browser custom track)
Alignm length: 625
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 52

Conread position: 112-269
Cow position: chr9:6293490-6293647 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 122
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 76, 26

Conread position: 112-399
Cow position: chr9:18217203-18216915 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 198
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 75, 36

Conread position: 112-400
Cow position: chr9:9654413-9654122 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 214
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 77, 97

Conread position: 112-483
Cow position: chr9:17310666-17310278 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 271
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 76, 26

Conread position: 112-486
Cow position: chr9:8288514-8288904 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 261
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 165, 34

Conread position: 112-498
Cow position: chr9:22696119-22696515 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 272
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 74, 36

Conread position: 112-516
Cow position: chr9:8562718-8563157 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 302
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 76, 28

Conread position: 112-518
Cow position: chr9:57897214-57896808 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 25

Conread position: 112-541
Cow position: chr9:33092852-33093284 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 290
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 40, 100

Conread position: 112-638
Cow position: chr9:20847830-20848374 (view UCSC Genome Browser custom track)
Alignm length: 554
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 26

Conread position: 112-660
Cow position: chr9:64091575-64092142 (view UCSC Genome Browser custom track)
Alignm length: 577
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 44

Conread position: 112-714
Cow position: chr9:1520843-1520216 (view UCSC Genome Browser custom track)
Alignm length: 636
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 26

Conread position: 113-450
Cow position: chr9:50139182-50139532 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 246
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 75, 33

Conread position: 117-385
Cow position: chr9:11168632-11168902 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 197
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 41, 20

Conread position: 117-399
Cow position: chr9:3738325-3738033 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 206
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 12, 31

Conread position: 117-399
Cow position: chr9:19555275-19555563 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 211
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 70, 80

Conread position: 117-659
Cow position: chr9:31079180-31078626 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 31

Conread position: 118-714
Cow position: chr9:5245754-5246359 (view UCSC Genome Browser custom track)
Alignm length: 624
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 29

Conread position: 119-317
Cow position: chr9:19758620-19758812 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 144
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 17, 133

Conread position: 119-397
Cow position: chr9:30652806-30652522 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 194
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 70, 29

Conread position: 119-405
Cow position: chr9:28354418-28354715 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 203
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 68, 207

Conread position: 119-655
Cow position: chr9:44832154-44831602 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 71

Conread position: 120-490
Cow position: chr9:40542040-40542404 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 267
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 66, 26

Conread position: 122-644
Cow position: chr9:8636570-8637097 (view UCSC Genome Browser custom track)
Alignm length: 537
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 234

Conread position: 122-717
Cow position: chr9:44467434-44466837 (view UCSC Genome Browser custom track)
Alignm length: 616
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 20

Conread position: 122-728
Cow position: chr9:5500758-5501366 (view UCSC Genome Browser custom track)
Alignm length: 625
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 19

Conread position: 123-717
Cow position: chr9:6952008-6952600 (view UCSC Genome Browser custom track)
Alignm length: 615
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 17

Conread position: 123-717
Cow position: chr9:44921499-44920897 (view UCSC Genome Browser custom track)
Alignm length: 616
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 18

Conread position: 124-377
Cow position: chr9:49293237-49292982 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 189
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 64, 192

Conread position: 124-535
Cow position: chr9:64155943-64155520 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 287
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 62, 19

Conread position: 127-602
Cow position: chr9:63745726-63746202 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 21

Conread position: 129-553
Cow position: chr9:5219259-5218828 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 24

Conread position: 129-595
Cow position: chr9:19902995-19903446 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 9

Conread position: 131-578
Cow position: chr9:5763717-5763253 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 30

Conread position: 133-496
Cow position: chr9:18073181-18072821 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 261
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 55, 79

Conread position: 134-717
Cow position: chr9:38961512-38960920 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 27

Conread position: 141-322
Cow position: chr9:32982152-32981963 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 143
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 47, 181

Conread position: 141-409
Cow position: chr9:60027120-60027396 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 201
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 47, 96

Conread position: 141-717
Cow position: chr9:46316858-46316273 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 67

Conread position: 144-397
Cow position: chr9:24872762-24873015 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 183
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 44, 67

Conread position: 148-385
Cow position: chr9:19493536-19493291 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 174
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 40, 0

Conread position: 148-399
Cow position: chr9:5209513-5209769 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 173
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 40, 7

Conread position: 148-498
Cow position: chr9:32371821-32371461 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 256
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 135, 39

Conread position: 148-525
Cow position: chr9:5319552-5319955 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 288
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 40, 49

Conread position: 148-573
Cow position: chr9:50607015-50606581 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 57

Conread position: 148-607
Cow position: chr9:41679677-41680137 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 127

Conread position: 148-632
Cow position: chr9:23431217-23430718 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 67

Conread position: 148-717
Cow position: chr9:44915167-44914598 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 63

Conread position: 148-728
Cow position: chr9:5509655-5510251 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 13

Conread position: 155-365
Cow position: chr9:43936882-43937091 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 144
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 33, 116

Conread position: 155-550
Cow position: chr9:5227235-5226816 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 74

Conread position: 155-717
Cow position: chr9:7634208-7634779 (view UCSC Genome Browser custom track)
Alignm length: 580
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 166

Conread position: 160-408
Cow position: chr9:43875777-43875526 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 190
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 28, 164

Conread position: 161-575
Cow position: chr9:22114692-22114267 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 69

Conread position: 165-716
Cow position: chr9:20989511-20988927 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 114

Conread position: 167-493
Cow position: chr9:9823557-9823225 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 226
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 21, 72

Conread position: 167-705
Cow position: chr9:3931911-3932471 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 32

Conread position: 172-549
Cow position: chr9:39152725-39152339 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 266
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 90, 45

Conread position: 172-571
Cow position: chr9:26403739-26404159 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 72

Conread position: 178-696
Cow position: chr9:41789244-41789792 (view UCSC Genome Browser custom track)
Alignm length: 554
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 140

Conread position: 182-546
Cow position: chr9:5441954-5442334 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 272
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 85, 138

Conread position: 186-475
Cow position: chr9:19637659-19637363 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 216
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 86, 30

Conread position: 187-493
Cow position: chr9:35849874-35850192 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 220
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 95, 121

Conread position: 187-560
Cow position: chr9:38343860-38344254 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 21

Conread position: 188-463
Cow position: chr9:36827106-36827389 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 212
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 78, 123

Conread position: 194-397
Cow position: chr9:31270755-31270964 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 146
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 20, 126

Conread position: 196-495
Cow position: chr9:25958396-25958709 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 220
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 41, 118

Conread position: 196-728
Cow position: chr9:22360989-22361540 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 128

Conread position: 197-604
Cow position: chr9:1952290-1951867 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 123

Conread position: 215-397
Cow position: chr9:8524840-8525021 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 139
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 74, 25

Conread position: 217-466
Cow position: chr9:30195214-30195464 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 183
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 56, 103

Conread position: 219-717
Cow position: chr9:19382328-19382852 (view UCSC Genome Browser custom track)
Alignm length: 534
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 95

Conread position: 229-480
Cow position: chr9:1712464-1712207 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 194
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 55, 84

Conread position: 230-374
Cow position: chr9:42509129-42509275 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 117
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 53, 89

Conread position: 233-706
Cow position: chr9:57951305-57950806 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 62

Conread position: 239-553
Cow position: chr9:34666442-34666760 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 81

Conread position: 240-523
Cow position: chr9:22228056-22227761 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 218
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 35, 15

Conread position: 246-467
Cow position: chr9:41652815-41653057 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 178
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 7, 11

Conread position: 246-728
Cow position: chr9:32812378-32812861 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 28

Conread position: 247-717
Cow position: chr9:4928662-4929136 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 10

Conread position: 251-542
Cow position: chr9:3924668-3924959 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 220
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 38, 19

Conread position: 255-466
Cow position: chr9:8546362-8546585 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 172
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 17, 61

Conread position: 263-717
Cow position: chr9:1997192-1997647 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 53

Conread position: 268-487
Cow position: chr9:49403816-49404042 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 179
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 118, 6

Conread position: 271-712
Cow position: chr9:22440451-22440002 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 43

Conread position: 273-709
Cow position: chr9:18110808-18110355 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 319
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 7, 43

Conread position: 274-564
Cow position: chr9:58439719-58439423 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 220
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 15, 26

Conread position: 274-717
Cow position: chr9:59507154-59507587 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 40

Conread position: 274-719
Cow position: chr9:53608333-53607876 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 41

Conread position: 276-492
Cow position: chr9:60037717-60037948 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 174
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 111, 38

Conread position: 277-496
Cow position: chr9:29034966-29034739 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 174
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 111, 37

Conread position: 277-654
Cow position: chr9:33681748-33682127 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 273
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 68, 37

Conread position: 288-714
Cow position: chr9:9490868-9491299 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 19

Conread position: 298-543
Cow position: chr9:34568653-34568413 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 175
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 97, 16

Conread position: 299-662
Cow position: chr9:49279561-49279918 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 15

Conread position: 313-727
Cow position: chr9:35100967-35101405 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 239

Conread position: 320-601
Cow position: chr9:2398521-2398232 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 214

Conread position: 324-711
Cow position: chr9:53109642-53110030 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 141

Conread position: 357-717
Cow position: chr9:13186569-13186211 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 113

Show alignments to all cow chromosomes.