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Cow genome map

           
Conread name:
           
Spl1-SPL01F070090
        

               
Conread position:
               
59-696
               

               
Cow position:
               
chr20:29806135-29805492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
654
               

               
Alignm identity:
               
428
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 218
               

               
Conread position:
               
59-697
               

               
Cow position:
               
chr20:34776691-34777348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
674
               

               
Alignm identity:
               
472
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 148
               

               
Conread position:
               
59-766
               

               
Cow position:
               
chr20:14760151-14759433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
737
               

               
Alignm identity:
               
516
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 216
               

               
Conread position:
               
59-767
               

               
Cow position:
               
chr20:20360252-20359561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
724
               

               
Alignm identity:
               
497
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 226
               

               
Conread position:
               
62-523
               

               
Cow position:
               
chr20:5025787-5025308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 40
               

               
Conread position:
               
64-687
               

               
Cow position:
               
chr20:40512224-40511598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
638
               

               
Alignm identity:
               
448
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 24
               

               
Conread position:
               
157-550
               

               
Cow position:
               
chr20:14679235-14679644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
14, 219
               

               
Conread position:
               
216-694
               

               
Cow position:
               
chr20:38768757-38768298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 53
               

               
Conread position:
               
223-767
               

               
Cow position:
               
chr20:8556575-8556029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
554
               

               
Alignm identity:
               
413
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 44
               

               
Conread position:
               
267-523
               

               
Cow position:
               
chr20:34918020-34918268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
71, 34
               

               
Conread position:
               
279-564
               

               
Cow position:
               
chr20:8910675-8910955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
57, 126
               

               
Conread position:
               
281-629
               

               
Cow position:
               
chr20:39019449-39019795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 139
               

               
Conread position:
               
285-570
               

               
Cow position:
               
chr20:26469308-26469028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 140
               

               
Conread position:
               
293-578
               

               
Cow position:
               
chr20:3781661-3781374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 7
               

               
Conread position:
               
293-764
               

               
Cow position:
               
chr20:33532077-33532528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 5
               

               
Conread position:
               
293-767
               

               
Cow position:
               
chr20:15549131-15548651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 5
               

               
Conread position:
               
296-637
               

               
Cow position:
               
chr20:3331525-3331178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
40, 6
               

               
Conread position:
               
297-756
               

               
Cow position:
               
chr20:23792374-23792823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 5
               

               
Conread position:
               
301-765
               

               
Cow position:
               
chr20:28296064-28296537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
35, 7
               

               
Conread position:
               
302-653
               

               
Cow position:
               
chr20:34001622-34001265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
35, 135
               

               
Conread position:
               
302-691
               

               
Cow position:
               
chr20:6096711-6096333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 72
               

               
Conread position:
               
303-757
               

               
Cow position:
               
chr20:13752016-13752444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 117
               

               
Conread position:
               
304-702
               

               
Cow position:
               
chr20:39728225-39728624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 124
               

               
Conread position:
               
305-767
               

               
Cow position:
               
chr20:11741526-11741075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 237
               

               
Conread position:
               
305-767
               

               
Cow position:
               
chr20:16935527-16935065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 217
               

               
Conread position:
               
307-766
               

               
Cow position:
               
chr20:19236869-19237311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 33
               

               
Conread position:
               
309-612
               

               
Cow position:
               
chr20:22704069-22704377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 284
               

               
Conread position:
               
309-687
               

               
Cow position:
               
chr20:40127555-40127185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
26, 126
               

               
Conread position:
               
310-764
               

               
Cow position:
               
chr20:28604988-28605444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 117
               

               
Conread position:
               
311-764
               

               
Cow position:
               
chr20:14806669-14807121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 110
               

               
Conread position:
               
314-687
               

               
Cow position:
               
chr20:40781759-40782119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
56, 24
               

               
Conread position:
               
314-708
               

               
Cow position:
               
chr20:11550152-11550548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 109
               

               
Conread position:
               
314-762
               

               
Cow position:
               
chr20:40177038-40177480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 110
               

               
Conread position:
               
315-509
               

               
Cow position:
               
chr20:23679359-23679165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
25, 96
               

               
Conread position:
               
315-512
               

               
Cow position:
               
chr20:17733986-17733789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
143, 26
               

               
Conread position:
               
315-524
               

               
Cow position:
               
chr20:11614256-11614045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
21, 154
               

               
Conread position:
               
315-531
               

               
Cow position:
               
chr20:11923453-11923238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
25, 94
               

               
Conread position:
               
315-531
               

               
Cow position:
               
chr20:19265944-19266159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
21, 132
               

               
Conread position:
               
315-533
               

               
Cow position:
               
chr20:12334169-12334382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
25, 88
               

               
Conread position:
               
315-568
               

               
Cow position:
               
chr20:5269281-5269031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
33, 16
               

               
Conread position:
               
315-568
               

               
Cow position:
               
chr20:19146657-19146916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
21, 229
               

               
Conread position:
               
315-585
               

               
Cow position:
               
chr20:23936628-23936348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
23, 36
               

               
Conread position:
               
315-586
               

               
Cow position:
               
chr20:17903943-17904216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
33, 97
               

               
Conread position:
               
315-586
               

               
Cow position:
               
chr20:40256757-40257027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
25, 75
               

               
Conread position:
               
315-588
               

               
Cow position:
               
chr20:20312950-20312688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
25, 81
               

               
Conread position:
               
315-589
               

               
Cow position:
               
chr20:27339854-27340121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
25, 78
               

               
Conread position:
               
315-615
               

               
Cow position:
               
chr20:13967471-13967171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 108
               

               
Conread position:
               
315-615
               

               
Cow position:
               
chr20:14735464-14735754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
25, 97
               

               
Conread position:
               
315-636
               

               
Cow position:
               
chr20:35958436-35958754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
109, 18
               

               
Conread position:
               
315-641
               

               
Cow position:
               
chr20:11482352-11482023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 230
               

               
Conread position:
               
315-648
               

               
Cow position:
               
chr20:35797393-35797729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 132
               

               
Conread position:
               
315-654
               

               
Cow position:
               
chr20:20471577-20471909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
21, 61
               

               
Conread position:
               
315-672
               

               
Cow position:
               
chr20:33363307-33363661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 88
               

               
Conread position:
               
315-676
               

               
Cow position:
               
chr20:26076872-26077227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
25, 109
               

               
Conread position:
               
315-682
               

               
Cow position:
               
chr20:18321010-18320641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 248
               

               
Conread position:
               
315-682
               

               
Cow position:
               
chr20:19459857-19459512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
153, 26
               

               
Conread position:
               
315-695
               

               
Cow position:
               
chr20:39517800-39518172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 8
               

               
Conread position:
               
315-696
               

               
Cow position:
               
chr20:19363575-19363198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 75
               

               
Conread position:
               
315-697
               

               
Cow position:
               
chr20:3321347-3320976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
16, 30
               

               
Conread position:
               
315-699
               

               
Cow position:
               
chr20:9412283-9412658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 25
               

               
Conread position:
               
315-702
               

               
Cow position:
               
chr20:4621552-4621180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
25, 100
               

               
Conread position:
               
315-702
               

               
Cow position:
               
chr20:9536921-9537305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
21, 90
               

               
Conread position:
               
315-702
               

               
Cow position:
               
chr20:19751096-19751480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 115
               

               
Conread position:
               
315-702
               

               
Cow position:
               
chr20:21714538-21714941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
22, 87
               

               
Conread position:
               
315-702
               

               
Cow position:
               
chr20:23065045-23064662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
25, 113
               

               
Conread position:
               
315-703
               

               
Cow position:
               
chr20:17845747-17846134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 114
               

               
Conread position:
               
315-727
               

               
Cow position:
               
chr20:20203003-20203415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 106
               

               
Conread position:
               
315-745
               

               
Cow position:
               
chr20:9433389-9433801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 25
               

               
Conread position:
               
315-751
               

               
Cow position:
               
chr20:6258276-6257850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 197
               

               
Conread position:
               
315-754
               

               
Cow position:
               
chr20:4205750-4206185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 281
               

               
Conread position:
               
315-756
               

               
Cow position:
               
chr20:22959554-22959113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 105
               

               
Conread position:
               
315-757
               

               
Cow position:
               
chr20:7426402-7425967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 110
               

               
Conread position:
               
315-758
               

               
Cow position:
               
chr20:28982485-28982930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 86
               

               
Conread position:
               
315-763
               

               
Cow position:
               
chr20:14879573-14880023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 93
               

               
Conread position:
               
315-764
               

               
Cow position:
               
chr20:6240742-6240282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 242
               

               
Conread position:
               
315-764
               

               
Cow position:
               
chr20:12582160-12581718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 81
               

               
Conread position:
               
315-765
               

               
Cow position:
               
chr20:4945458-4945011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 85
               

               
Conread position:
               
315-765
               

               
Cow position:
               
chr20:6054725-6054268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 80
               

               
Conread position:
               
315-765
               

               
Cow position:
               
chr20:10200128-10200589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 112
               

               
Conread position:
               
315-765
               

               
Cow position:
               
chr20:12996222-12995754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 107
               

               
Conread position:
               
315-765
               

               
Cow position:
               
chr20:17251498-17251958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 24
               

               
Conread position:
               
315-765
               

               
Cow position:
               
chr20:19328187-19328637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
21, 84
               

               
Conread position:
               
315-765
               

               
Cow position:
               
chr20:20353127-20352671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
21, 41
               

               
Conread position:
               
315-766
               

               
Cow position:
               
chr20:25009856-25009393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 201
               

               
Conread position:
               
315-766
               

               
Cow position:
               
chr20:31740428-31739977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 40
               

               
Conread position:
               
315-767
               

               
Cow position:
               
chr20:1640660-1640226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 186
               

               
Conread position:
               
315-767
               

               
Cow position:
               
chr20:7756842-7756396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 90
               

               
Conread position:
               
315-767
               

               
Cow position:
               
chr20:10235639-10236059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 206
               

               
Conread position:
               
315-767
               

               
Cow position:
               
chr20:13876921-13876468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 133
               

               
Conread position:
               
315-767
               

               
Cow position:
               
chr20:26996321-26996775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 25
               

               
Conread position:
               
315-767
               

               
Cow position:
               
chr20:40423303-40422857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
25, 106
               

               
Conread position:
               
315-768
               

               
Cow position:
               
chr20:21345193-21345681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 251
               

               
Conread position:
               
315-785
               

               
Cow position:
               
chr20:4756038-4755574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 73
               

               
Conread position:
               
316-512
               

               
Cow position:
               
chr20:18185367-18185552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
22, 87
               

               
Conread position:
               
316-586
               

               
Cow position:
               
chr20:9473826-9473555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
24, 137
               

               
Conread position:
               
316-643
               

               
Cow position:
               
chr20:16715188-16715505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
24, 95
               

               
Conread position:
               
316-677
               

               
Cow position:
               
chr20:15235552-15235900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
40, 201
               

               
Conread position:
               
316-701
               

               
Cow position:
               
chr20:39415534-39415922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
20, 42
               

               
Conread position:
               
316-703
               

               
Cow position:
               
chr20:38578966-38578592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 25
               

               
Conread position:
               
316-751
               

               
Cow position:
               
chr20:30817325-30817746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
24, 107
               

               
Conread position:
               
316-762
               

               
Cow position:
               
chr20:13269413-13269850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 198
               

               
Conread position:
               
316-765
               

               
Cow position:
               
chr20:39418106-39417664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 79
               

               
Conread position:
               
316-767
               

               
Cow position:
               
chr20:7442336-7441901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 96
               

               
Conread position:
               
316-767
               

               
Cow position:
               
chr20:8703118-8702689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 71
               

               
Conread position:
               
316-767
               

               
Cow position:
               
chr20:12420833-12420378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 228
               

               
Conread position:
               
316-767
               

               
Cow position:
               
chr20:29844843-29845296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 99
               

               
Conread position:
               
316-767
               

               
Cow position:
               
chr20:38817799-38818230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 94
               

               
Conread position:
               
317-554
               

               
Cow position:
               
chr20:33176971-33177215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
19, 109
               

               
Conread position:
               
317-696
               

               
Cow position:
               
chr20:581131-580753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 109
               

               
Conread position:
               
317-767
               

               
Cow position:
               
chr20:32847141-32847584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 95
               

               
Conread position:
               
319-501
               

               
Cow position:
               
chr20:36997505-36997690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
319-525
               

               
Cow position:
               
chr20:22445843-22445639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
24, 101
               

               
Conread position:
               
319-533
               

               
Cow position:
               
chr20:7600986-7600775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
18, 52
               

               
Conread position:
               
319-533
               

               
Cow position:
               
chr20:9379200-9379416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
21, 102
               

               
Conread position:
               
319-551
               

               
Cow position:
               
chr20:27977919-27977683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
21, 163
               

               
Conread position:
               
319-587
               

               
Cow position:
               
chr20:15593087-15593356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
17, 81
               

               
Conread position:
               
319-633
               

               
Cow position:
               
chr20:23505620-23505931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 107
               

               
Conread position:
               
319-694
               

               
Cow position:
               
chr20:35907255-35906887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
6, 10
               

               
Conread position:
               
319-698
               

               
Cow position:
               
chr20:42469557-42469926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 41
               

               
Conread position:
               
319-709
               

               
Cow position:
               
chr20:6890496-6890888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
21, 72
               

               
Conread position:
               
319-749
               

               
Cow position:
               
chr20:31746832-31746413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 75
               

               
Conread position:
               
319-754
               

               
Cow position:
               
chr20:6423755-6424182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
19, 81
               

               
Conread position:
               
319-759
               

               
Cow position:
               
chr20:34597317-34596870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
22, 278
               

               
Conread position:
               
319-764
               

               
Cow position:
               
chr20:33170083-33169634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
30, 101
               

               
Conread position:
               
319-767
               

               
Cow position:
               
chr20:13493529-13493967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
21, 84
               

               
Conread position:
               
319-767
               

               
Cow position:
               
chr20:20983798-20984238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 73
               

               
Conread position:
               
319-767
               

               
Cow position:
               
chr20:39398280-39398723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 73
               

               
Conread position:
               
320-509
               

               
Cow position:
               
chr20:15582244-15582055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
16, 95
               

               
Conread position:
               
320-564
               

               
Cow position:
               
chr20:36331636-36331387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
20, 207
               

               
Conread position:
               
320-753
               

               
Cow position:
               
chr20:20967134-20967546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
164, 65
               

               
Conread position:
               
320-763
               

               
Cow position:
               
chr20:382335-381897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 210
               

               
Conread position:
               
320-763
               

               
Cow position:
               
chr20:14572564-14572140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 107
               

               
Conread position:
               
321-533
               

               
Cow position:
               
chr20:19845796-19846020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
325-654
               

               
Cow position:
               
chr20:3607154-3606835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 10
               

               
Conread position:
               
325-702
               

               
Cow position:
               
chr20:15566034-15565656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 205
               

               
Conread position:
               
325-765
               

               
Cow position:
               
chr20:39325182-39325631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 176
               

               
Conread position:
               
325-766
               

               
Cow position:
               
chr20:8578043-8578495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 206
               

               
Conread position:
               
325-780
               

               
Cow position:
               
chr20:22064867-22065314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 104
               

               
Conread position:
               
326-701
               

               
Cow position:
               
chr20:5826735-5827112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 258
               

               
Conread position:
               
327-767
               

               
Cow position:
               
chr20:22235113-22235540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 81
               

               
Conread position:
               
327-767
               

               
Cow position:
               
chr20:24069611-24070043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 28
               

               
Conread position:
               
329-767
               

               
Cow position:
               
chr20:7659412-7658984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 39
               

               
Conread position:
               
329-767
               

               
Cow position:
               
chr20:10208605-10209048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 202
               

               
Conread position:
               
330-693
               

               
Cow position:
               
chr20:33144753-33144389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
9, 75
               

               
Conread position:
               
334-533
               

               
Cow position:
               
chr20:13994617-13994819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
90, 188
               

               
Conread position:
               
334-768
               

               
Cow position:
               
chr20:35176962-35176532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
9, 37
               

               
Conread position:
               
335-509
               

               
Cow position:
               
chr20:9988392-9988570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
17, 88
               

               
Conread position:
               
335-514
               

               
Cow position:
               
chr20:11043687-11043515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
129, 67
               

               
Conread position:
               
335-530
               

               
Cow position:
               
chr20:35760480-35760673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
128, 92
               

               
Conread position:
               
335-558
               

               
Cow position:
               
chr20:19410560-19410332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
71, 111
               

               
Conread position:
               
335-559
               

               
Cow position:
               
chr20:38415162-38414942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
135, 86
               

               
Conread position:
               
335-679
               

               
Cow position:
               
chr20:11542474-11542137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 90
               

               
Conread position:
               
335-693
               

               
Cow position:
               
chr20:28067617-28067260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 88
               

               
Conread position:
               
335-696
               

               
Cow position:
               
chr20:21928714-21929070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
89, 19
               

               
Conread position:
               
335-735
               

               
Cow position:
               
chr20:12239871-12239477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 123
               

               
Conread position:
               
335-750
               

               
Cow position:
               
chr20:6602850-6603255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 72
               

               
Conread position:
               
335-764
               

               
Cow position:
               
chr20:5998855-5998423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
313, 80
               

               
Conread position:
               
335-767
               

               
Cow position:
               
chr20:23846863-23846424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 257
               

               
Conread position:
               
336-767
               

               
Cow position:
               
chr20:32084274-32083858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 22
               

               
Conread position:
               
338-627
               

               
Cow position:
               
chr20:11864324-11864034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
85, 76
               

               
Conread position:
               
338-682
               

               
Cow position:
               
chr20:36207614-36207967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 121
               

               
Conread position:
               
340-753
               

               
Cow position:
               
chr20:7550055-7550461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
119, 85
               

               
Conread position:
               
341-682
               

               
Cow position:
               
chr20:34107931-34108258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
122, 30
               

               
Conread position:
               
342-765
               

               
Cow position:
               
chr20:3141399-3141814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
301, 61
               

               
Conread position:
               
342-767
               

               
Cow position:
               
chr20:14980698-14980266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 6
               

               
Conread position:
               
343-766
               

               
Cow position:
               
chr20:11045495-11045914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
113, 60
               

               
Conread position:
               
344-565
               

               
Cow position:
               
chr20:37200171-37200398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
83, 48
               

               
Conread position:
               
344-765
               

               
Cow position:
               
chr20:3740183-3739770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
11, 70
               

               
Conread position:
               
348-585
               

               
Cow position:
               
chr20:37272538-37272771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
76, 28
               

               
Conread position:
               
348-767
               

               
Cow position:
               
chr20:27408056-27407654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 182
               

               
Conread position:
               
350-512
               

               
Cow position:
               
chr20:41119739-41119897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
112, 71
               

               
Conread position:
               
353-590
               

               
Cow position:
               
chr20:24391807-24392040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
71, 112
               

               
Conread position:
               
356-680
               

               
Cow position:
               
chr20:31080874-31081189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
107, 14
               

               
Conread position:
               
357-586
               

               
Cow position:
               
chr20:28831794-28832028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
33, 191
               

               
Conread position:
               
360-677
               

               
Cow position:
               
chr20:7210869-7211182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 171
               

               
Conread position:
               
361-766
               

               
Cow position:
               
chr20:7439014-7438617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 22
               

               
Conread position:
               
362-767
               

               
Cow position:
               
chr20:3254884-3255275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 108
               

               
Conread position:
               
363-767
               

               
Cow position:
               
chr20:15312496-15312892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
61, 247
               

               
Conread position:
               
364-616
               

               
Cow position:
               
chr20:283091-282839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
57, 165
               

               
Conread position:
               
365-748
               

               
Cow position:
               
chr20:5814409-5814791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
59, 97
               

               
Conread position:
               
365-765
               

               
Cow position:
               
chr20:32523307-32523702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
95, 22
               

               
Conread position:
               
366-572
               

               
Cow position:
               
chr20:9701735-9701525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
57, 19
               

               
Conread position:
               
367-614
               

               
Cow position:
               
chr20:18837320-18837070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
48, 172
               

               
Conread position:
               
370-767
               

               
Cow position:
               
chr20:15569106-15568722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
54, 155
               

               
Conread position:
               
371-687
               

               
Cow position:
               
chr20:5636325-5636639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 159
               

               
Conread position:
               
371-767
               

               
Cow position:
               
chr20:34221319-34221723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
24, 120
               

               
Conread position:
               
372-702
               

               
Cow position:
               
chr20:21761622-21761950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
93, 39
               

               
Conread position:
               
373-568
               

               
Cow position:
               
chr20:41309383-41309579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
50, 153
               

               
Conread position:
               
373-682
               

               
Cow position:
               
chr20:1575946-1576250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
161, 46
               

               
Conread position:
               
373-696
               

               
Cow position:
               
chr20:13025761-13025443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
85, 18
               

               
Conread position:
               
376-745
               

               
Cow position:
               
chr20:36010639-36011007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
48, 158
               

               
Conread position:
               
377-766
               

               
Cow position:
               
chr20:8307864-8308244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 156
               

               
Conread position:
               
378-677
               

               
Cow position:
               
chr20:42197179-42197461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
49, 81
               

               
Conread position:
               
379-764
               

               
Cow position:
               
chr20:4334667-4334300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
91, 44
               

               
Conread position:
               
379-765
               

               
Cow position:
               
chr20:41089941-41089553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
45, 90
               

               
Conread position:
               
380-568
               

               
Cow position:
               
chr20:39247763-39247952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
44, 52
               

               
Conread position:
               
380-767
               

               
Cow position:
               
chr20:18379236-18379618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 18
               

               
Conread position:
               
382-767
               

               
Cow position:
               
chr20:2298926-2298556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 139
               

               
Conread position:
               
384-765
               

               
Cow position:
               
chr20:14433570-14433181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
72, 35
               

               
Conread position:
               
388-702
               

               
Cow position:
               
chr20:40446191-40446503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
35, 23
               

               
Conread position:
               
392-767
               

               
Cow position:
               
chr20:31289368-31289744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
65, 17
               

               
Conread position:
               
395-702
               

               
Cow position:
               
chr20:7362835-7363136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
29, 14
               

               
Conread position:
               
398-704
               

               
Cow position:
               
chr20:22484727-22485034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
11, 140
               

               
Conread position:
               
400-762
               

               
Cow position:
               
chr20:25162258-25161895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 130
               

               
Conread position:
               
403-654
               

               
Cow position:
               
chr20:13794864-13795103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
404-702
               

               
Cow position:
               
chr20:36633691-36633985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
19, 126
               

               
Conread position:
               
405-682
               

               
Cow position:
               
chr20:35407738-35408004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
19, 124
               

               
Conread position:
               
411-735
               

               
Cow position:
               
chr20:32463640-32463317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 120
               

               
Conread position:
               
413-753
               

               
Cow position:
               
chr20:33067488-33067132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
42, 14
               

               
Conread position:
               
415-729
               

               
Cow position:
               
chr20:11188920-11188611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
9, 130
               

               
Conread position:
               
421-682
               

               
Cow position:
               
chr20:39267067-39266805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 142
               

               
Conread position:
               
421-752
               

               
Cow position:
               
chr20:10188167-10188501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
54, 119
               

               
Conread position:
               
423-765
               

               
Cow position:
               
chr20:35710065-35710398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
11, 90
               

               
Conread position:
               
425-687
               

               
Cow position:
               
chr20:16491970-16492231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
38, 14
               

               
Conread position:
               
426-655
               

               
Cow position:
               
chr20:19616383-19616619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
34, 167
               

               
Conread position:
               
426-764
               

               
Cow position:
               
chr20:11611578-11611919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
29, 107
               

               
Conread position:
               
426-765
               

               
Cow position:
               
chr20:24711732-24712079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
34, 167
               

               
Conread position:
               
432-639
               

               
Cow position:
               
chr20:23103123-23103332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
35, 159
               

               
Conread position:
               
432-767
               

               
Cow position:
               
chr20:7738323-7737993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 99
               

               
Conread position:
               
433-753
               

               
Cow position:
               
chr20:22265341-22265040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
29, 96
               

               
Conread position:
               
434-753
               

               
Cow position:
               
chr20:15822457-15822777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
34, 101
               

               
Conread position:
               
440-702
               

               
Cow position:
               
chr20:41883647-41883901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
23, 93
               

               
Conread position:
               
441-736
               

               
Cow position:
               
chr20:32866275-32865989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
30, 38
               

               
Conread position:
               
441-764
               

               
Cow position:
               
chr20:38868557-38868859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
21, 10
               

               
Conread position:
               
451-756
               

               
Cow position:
               
chr20:33976405-33976719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
17, 7
               

               
Conread position:
               
454-679
               

               
Cow position:
               
chr20:38670684-38670900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
16, 70
               

               
Conread position:
               
455-767
               

               
Cow position:
               
chr20:21428094-21428399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
126, 25
               

               
Conread position:
               
459-755
               

               
Cow position:
               
chr20:354964-354669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
184, 79
               

               
Conread position:
               
462-704
               

               
Cow position:
               
chr20:23506534-23506298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
107, 77
               

               
Conread position:
               
462-763
               

               
Cow position:
               
chr20:7624311-7624022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
176, 48
               

               
Conread position:
               
462-764
               

               
Cow position:
               
chr20:35192713-35192997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
126, 79
               

               
Conread position:
               
462-766
               

               
Cow position:
               
chr20:5078559-5078876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
73, 141
               

               
Conread position:
               
462-767
               

               
Cow position:
               
chr20:5009674-5009973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
217, 41
               

               
Conread position:
               
462-767
               

               
Cow position:
               
chr20:11548786-11548487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
116, 66
               

               
Conread position:
               
462-767
               

               
Cow position:
               
chr20:38089847-38090158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 66
               

               
Conread position:
               
463-757
               

               
Cow position:
               
chr20:16548341-16548040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
180, 70
               

               
Conread position:
               
467-767
               

               
Cow position:
               
chr20:38514722-38515030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
174, 62
               

               
Conread position:
               
469-718
               

               
Cow position:
               
chr20:17100303-17100550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
57, 71
               

               
Conread position:
               
469-765
               

               
Cow position:
               
chr20:16818358-16818657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
41, 131
               

               
Conread position:
               
472-767
               

               
Cow position:
               
chr20:9376414-9376703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
75, 53
               

               
Conread position:
               
473-679
               

               
Cow position:
               
chr20:10772150-10772355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
167, 115
               

               
Conread position:
               
475-767
               

               
Cow position:
               
chr20:12126357-12126060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
12, 54
               

               
Conread position:
               
477-762
               

               
Cow position:
               
chr20:20898640-20898353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
163, 43
               

               
Conread position:
               
478-767
               

               
Cow position:
               
chr20:4787062-4786791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
52, 111
               

               
Conread position:
               
479-753
               

               
Cow position:
               
chr20:5702673-5702949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
11, 70
               

               
Conread position:
               
479-767
               

               
Cow position:
               
chr20:11359678-11359398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
13, 60
               

               
Conread position:
               
481-765
               

               
Cow position:
               
chr20:39016922-39016630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
98, 114
               

               
Conread position:
               
485-767
               

               
Cow position:
               
chr20:16941330-16941041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
65, 11
               

               
Conread position:
               
486-682
               

               
Cow position:
               
chr20:21999957-22000154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
56, 41
               

               
Conread position:
               
486-766
               

               
Cow position:
               
chr20:11751608-11751894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
44, 105
               

               
Conread position:
               
487-675
               

               
Cow position:
               
chr20:39212621-39212435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
29, 56
               

               
Conread position:
               
487-702
               

               
Cow position:
               
chr20:22030280-22030492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
153, 100
               

               
Conread position:
               
497-701
               

               
Cow position:
               
chr20:21815531-21815731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
29, 21
               

               
Conread position:
               
497-728
               

               
Cow position:
               
chr20:19060869-19060638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
143, 110
               

               
Conread position:
               
501-674
               

               
Cow position:
               
chr20:30888007-30888180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
84, 27
               

               
Conread position:
               
502-702
               

               
Cow position:
               
chr20:26723699-26723508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
141, 26
               

               
Conread position:
               
505-767
               

               
Cow position:
               
chr20:14620331-14620065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
11, 90
               

               
Conread position:
               
540-694
               

               
Cow position:
               
chr20:8912488-8912334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
35, 58
               

               
Conread position:
               
540-767
               

               
Cow position:
               
chr20:20158147-20158372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
103, 51
               

               
Conread position:
               
541-735
               

               
Cow position:
               
chr20:35445091-35444894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
102, 47
               

               
Conread position:
               
541-764
               

               
Cow position:
               
chr20:24097013-24097233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
102, 46
               

               
Conread position:
               
543-767
               

               
Cow position:
               
chr20:33623538-33623318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
100, 44
               

               
Conread position:
               
543-770
               

               
Cow position:
               
chr20:15529875-15530104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
100, 45
               

               
Conread position:
               
544-676
               

               
Cow position:
               
chr20:8817476-8817344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
95, 44
               

               
Conread position:
               
545-764
               

               
Cow position:
               
chr20:3148700-3148919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
94, 43
               

               
Conread position:
               
551-767
               

               
Cow position:
               
chr20:23358470-23358253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
11, 40
               

               
Conread position:
               
556-764
               

               
Cow position:
               
chr20:24315005-24314799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
85, 5
               

               
Conread position:
               
557-766
               

               
Cow position:
               
chr20:36312480-36312271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
82, 34
               

               
Conread position:
               
557-767
               

               
Cow position:
               
chr20:3564188-3564394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
85, 31
               

               
Conread position:
               
564-765
               

               
Cow position:
               
chr20:14282955-14283162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
75, 27
               

               
Conread position:
               
564-767
               

               
Cow position:
               
chr20:19636141-19635937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
79, 24
               

               
Conread position:
               
565-767
               

               
Cow position:
               
chr20:21325362-21325566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
78, 26
               

               
Conread position:
               
574-767
               

               
Cow position:
               
chr20:19834785-19834590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
69, 14
               

               
Conread position:
               
575-752
               

               
Cow position:
               
chr20:20590255-20590078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
15, 27
               

               
Conread position:
               
575-767
               

               
Cow position:
               
chr20:13805362-13805557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
53, 13
               

               
Conread position:
               
576-764
               

               
Cow position:
               
chr20:26041051-26040859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
64, 15
               

               
Conread position:
               
582-767
               

               
Cow position:
               
chr20:4892066-4891877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
60, 6
               

               
Conread position:
               
591-767
               

               
Cow position:
               
chr20:14755779-14755602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
52, 72
               

               
Conread position:
               
601-767
               

               
Cow position:
               
chr20:24491957-24491786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
45, 10
               

               
Conread position:
               
601-767
               

               
Cow position:
               
chr20:26387532-26387697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
39, 55
               

               
Conread position:
               
602-765
               

               
Cow position:
               
chr20:37357928-37358098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
41, 58
               

               
Conread position:
               
602-767
               

               
Cow position:
               
chr20:2316353-2316186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
41, 58
               

               
Conread position:
               
602-767
               

               
Cow position:
               
chr20:19201603-19201775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
41, 64
               

               
Conread position:
               
603-763
               

               
Cow position:
               
chr20:11499081-11499240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
40, 54
               

               
Conread position:
               
603-767
               

               
Cow position:
               
chr20:14490319-14490483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
40, 60
               

               
Conread position:
               
604-766
               

               
Cow position:
               
chr20:4789777-4789620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
151, 54
               

               
Conread position:
               
605-765
               

               
Cow position:
               
chr20:27315053-27315215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
40, 55
               

               
Conread position:
               
623-767
               

               
Cow position:
               
chr20:38061673-38061532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
20, 37
               

               
Conread position:
               
624-762
               

               
Cow position:
               
chr20:18423774-18423912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
18, 36
               

               
Conread position:
               
624-767
               

               
Cow position:
               
chr20:23506029-23506177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
19, 36
               

               
Conread position:
               
627-767
               

               
Cow position:
               
chr20:21169665-21169528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
14, 33
               
Show alignments to all cow chromosomes.