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Cow genome map

           
Conread name:
           
Spl1-SPL01F070090
        

               
Conread position:
               
59-568
               

               
Cow position:
               
chr28:27428244-27428748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 215
               

               
Conread position:
               
59-697
               

               
Cow position:
               
chr28:10172937-10172287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
661
               

               
Alignm identity:
               
491
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 429
               

               
Conread position:
               
68-552
               

               
Cow position:
               
chr28:25424815-25424311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 47
               

               
Conread position:
               
160-767
               

               
Cow position:
               
chr28:23459741-23460347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
624
               

               
Alignm identity:
               
413
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 109
               

               
Conread position:
               
164-702
               

               
Cow position:
               
chr28:19080237-19079710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
551
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 18
               

               
Conread position:
               
269-678
               

               
Cow position:
               
chr28:8408440-8408847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 47
               

               
Conread position:
               
295-715
               

               
Cow position:
               
chr28:25596362-25596774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 105
               

               
Conread position:
               
295-757
               

               
Cow position:
               
chr28:20963802-20963354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
45, 183
               

               
Conread position:
               
296-581
               

               
Cow position:
               
chr28:9390633-9390349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
40, 6
               

               
Conread position:
               
297-581
               

               
Cow position:
               
chr28:22170987-22170695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
7, 111
               

               
Conread position:
               
297-615
               

               
Cow position:
               
chr28:12758774-12758453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
127, 5
               

               
Conread position:
               
297-765
               

               
Cow position:
               
chr28:2800976-2801428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
43, 5
               

               
Conread position:
               
297-766
               

               
Cow position:
               
chr28:616136-616571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
43, 5
               

               
Conread position:
               
301-533
               

               
Cow position:
               
chr28:19222861-19222628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
5, 15
               

               
Conread position:
               
302-765
               

               
Cow position:
               
chr28:15272524-15272069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
34, 117
               

               
Conread position:
               
305-533
               

               
Cow position:
               
chr28:19295624-19295391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
9, 128
               

               
Conread position:
               
307-767
               

               
Cow position:
               
chr28:3493042-3492584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 95
               

               
Conread position:
               
309-702
               

               
Cow position:
               
chr28:2898739-2899124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 98
               

               
Conread position:
               
309-707
               

               
Cow position:
               
chr28:21354968-21355369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 89
               

               
Conread position:
               
310-585
               

               
Cow position:
               
chr28:7980671-7980399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
114, 13
               

               
Conread position:
               
310-767
               

               
Cow position:
               
chr28:3745947-3746400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 12
               

               
Conread position:
               
312-767
               

               
Cow position:
               
chr28:29416969-29416522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 30
               

               
Conread position:
               
313-516
               

               
Cow position:
               
chr28:28076656-28076458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
159, 19
               

               
Conread position:
               
313-629
               

               
Cow position:
               
chr28:7751553-7751240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 158
               

               
Conread position:
               
313-701
               

               
Cow position:
               
chr28:6971591-6971214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 91
               

               
Conread position:
               
314-710
               

               
Cow position:
               
chr28:25249104-25249495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 82
               

               
Conread position:
               
314-767
               

               
Cow position:
               
chr28:661870-662303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 25
               

               
Conread position:
               
315-487
               

               
Cow position:
               
chr28:8372220-8372397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
315-500
               

               
Cow position:
               
chr28:20760174-20759984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
315-501
               

               
Cow position:
               
chr28:5805275-5805454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
27, 84
               

               
Conread position:
               
315-507
               

               
Cow position:
               
chr28:2814749-2814565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
21, 59
               

               
Conread position:
               
315-508
               

               
Cow position:
               
chr28:4880514-4880322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
23, 110
               

               
Conread position:
               
315-509
               

               
Cow position:
               
chr28:6051486-6051678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
109, 17
               

               
Conread position:
               
315-512
               

               
Cow position:
               
chr28:11451717-11451515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
21, 99
               

               
Conread position:
               
315-512
               

               
Cow position:
               
chr28:12048949-12048755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
28, 89
               

               
Conread position:
               
315-523
               

               
Cow position:
               
chr28:17738329-17738115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
315-523
               

               
Cow position:
               
chr28:25563826-25564040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
315-532
               

               
Cow position:
               
chr28:2279916-2279698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
22, 108
               

               
Conread position:
               
315-533
               

               
Cow position:
               
chr28:13356835-13356607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
28, 92
               

               
Conread position:
               
315-533
               

               
Cow position:
               
chr28:15007911-15008130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
21, 86
               

               
Conread position:
               
315-533
               

               
Cow position:
               
chr28:17287974-17288187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
25, 107
               

               
Conread position:
               
315-533
               

               
Cow position:
               
chr28:24996838-24996620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
21, 48
               

               
Conread position:
               
315-533
               

               
Cow position:
               
chr28:34878223-34878001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
27, 90
               

               
Conread position:
               
315-547
               

               
Cow position:
               
chr28:6546640-6546398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
315-550
               

               
Cow position:
               
chr28:26269079-26269315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
21, 113
               

               
Conread position:
               
315-556
               

               
Cow position:
               
chr28:16215141-16214913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
141, 109
               

               
Conread position:
               
315-568
               

               
Cow position:
               
chr28:7590433-7590180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
11, 91
               

               
Conread position:
               
315-578
               

               
Cow position:
               
chr28:13607635-13607900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
25, 80
               

               
Conread position:
               
315-585
               

               
Cow position:
               
chr28:5773392-5773654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
315-585
               

               
Cow position:
               
chr28:16253105-16252838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
145, 24
               

               
Conread position:
               
315-625
               

               
Cow position:
               
chr28:4057736-4058039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
21, 66
               

               
Conread position:
               
315-629
               

               
Cow position:
               
chr28:10534179-10533874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 44
               

               
Conread position:
               
315-637
               

               
Cow position:
               
chr28:7549312-7548989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 215
               

               
Conread position:
               
315-641
               

               
Cow position:
               
chr28:25806339-25806646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
147, 25
               

               
Conread position:
               
315-652
               

               
Cow position:
               
chr28:10744959-10745300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 104
               

               
Conread position:
               
315-653
               

               
Cow position:
               
chr28:31110255-31109917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
27, 89
               

               
Conread position:
               
315-655
               

               
Cow position:
               
chr28:12946694-12947038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
97, 25
               

               
Conread position:
               
315-660
               

               
Cow position:
               
chr28:4536220-4536552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
27, 87
               

               
Conread position:
               
315-672
               

               
Cow position:
               
chr28:11786958-11786612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
28, 95
               

               
Conread position:
               
315-676
               

               
Cow position:
               
chr28:2862611-2862977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 212
               

               
Conread position:
               
315-680
               

               
Cow position:
               
chr28:7228633-7228277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 26
               

               
Conread position:
               
315-682
               

               
Cow position:
               
chr28:7865078-7865444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 25
               

               
Conread position:
               
315-682
               

               
Cow position:
               
chr28:12619312-12619689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 283
               

               
Conread position:
               
315-690
               

               
Cow position:
               
chr28:26922614-26922245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 111
               

               
Conread position:
               
315-700
               

               
Cow position:
               
chr28:33051770-33052169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 296
               

               
Conread position:
               
315-702
               

               
Cow position:
               
chr28:19026253-19025870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 79
               

               
Conread position:
               
315-702
               

               
Cow position:
               
chr28:29199477-29199865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 90
               

               
Conread position:
               
315-709
               

               
Cow position:
               
chr28:11687283-11686885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 283
               

               
Conread position:
               
315-723
               

               
Cow position:
               
chr28:26533292-26533705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
23, 222
               

               
Conread position:
               
315-729
               

               
Cow position:
               
chr28:3408467-3408057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 210
               

               
Conread position:
               
315-734
               

               
Cow position:
               
chr28:26103465-26103868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
25, 90
               

               
Conread position:
               
315-745
               

               
Cow position:
               
chr28:30303443-30303027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 46
               

               
Conread position:
               
315-753
               

               
Cow position:
               
chr28:26743372-26743820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 97
               

               
Conread position:
               
315-756
               

               
Cow position:
               
chr28:21363508-21363932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
27, 52
               

               
Conread position:
               
315-757
               

               
Cow position:
               
chr28:5817597-5818031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 45
               

               
Conread position:
               
315-762
               

               
Cow position:
               
chr28:3144140-3143687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 108
               

               
Conread position:
               
315-762
               

               
Cow position:
               
chr28:7512842-7512382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 288
               

               
Conread position:
               
315-763
               

               
Cow position:
               
chr28:1099892-1099478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 106
               

               
Conread position:
               
315-763
               

               
Cow position:
               
chr28:7268186-7267750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 57
               

               
Conread position:
               
315-764
               

               
Cow position:
               
chr28:5931103-5931544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 96
               

               
Conread position:
               
315-764
               

               
Cow position:
               
chr28:23410574-23410134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 126
               

               
Conread position:
               
315-765
               

               
Cow position:
               
chr28:7698231-7697778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 11
               

               
Conread position:
               
315-765
               

               
Cow position:
               
chr28:9426592-9426151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 74
               

               
Conread position:
               
315-765
               

               
Cow position:
               
chr28:15263975-15263517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 279
               

               
Conread position:
               
315-765
               

               
Cow position:
               
chr28:30327331-30326900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 34
               

               
Conread position:
               
315-766
               

               
Cow position:
               
chr28:3024162-3023714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 106
               

               
Conread position:
               
315-766
               

               
Cow position:
               
chr28:25056721-25057158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 93
               

               
Conread position:
               
315-767
               

               
Cow position:
               
chr28:5684454-5684903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 120
               

               
Conread position:
               
315-767
               

               
Cow position:
               
chr28:10616201-10615747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 97
               

               
Conread position:
               
315-767
               

               
Cow position:
               
chr28:10669324-10669790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
25, 114
               

               
Conread position:
               
315-767
               

               
Cow position:
               
chr28:11426795-11426345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 216
               

               
Conread position:
               
315-767
               

               
Cow position:
               
chr28:16370324-16369886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 99
               

               
Conread position:
               
315-767
               

               
Cow position:
               
chr28:21104097-21103617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
22, 42
               

               
Conread position:
               
315-767
               

               
Cow position:
               
chr28:21844706-21845154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 180
               

               
Conread position:
               
315-767
               

               
Cow position:
               
chr28:26719110-26719533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 47
               

               
Conread position:
               
315-769
               

               
Cow position:
               
chr28:16211347-16210894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 157
               

               
Conread position:
               
315-770
               

               
Cow position:
               
chr28:10589279-10588827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 62
               

               
Conread position:
               
316-509
               

               
Cow position:
               
chr28:16354869-16354661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
24, 199
               

               
Conread position:
               
316-575
               

               
Cow position:
               
chr28:23839960-23840212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
24, 91
               

               
Conread position:
               
316-585
               

               
Cow position:
               
chr28:18790762-18791034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
24, 36
               

               
Conread position:
               
316-628
               

               
Cow position:
               
chr28:3256552-3256858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 17
               

               
Conread position:
               
316-632
               

               
Cow position:
               
chr28:22484999-22485317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
20, 40
               

               
Conread position:
               
316-679
               

               
Cow position:
               
chr28:26614646-26614985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 24
               

               
Conread position:
               
316-682
               

               
Cow position:
               
chr28:21598502-21598135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 104
               

               
Conread position:
               
316-758
               

               
Cow position:
               
chr28:14997815-14998258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 43
               

               
Conread position:
               
316-763
               

               
Cow position:
               
chr28:27218071-27218524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 216
               

               
Conread position:
               
316-766
               

               
Cow position:
               
chr28:750978-751430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 21
               

               
Conread position:
               
316-766
               

               
Cow position:
               
chr28:9740222-9740660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 71
               

               
Conread position:
               
316-767
               

               
Cow position:
               
chr28:5203953-5204388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 25
               

               
Conread position:
               
316-767
               

               
Cow position:
               
chr28:5236849-5236392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 24
               

               
Conread position:
               
316-767
               

               
Cow position:
               
chr28:8787301-8787742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 24
               

               
Conread position:
               
316-767
               

               
Cow position:
               
chr28:10977615-10978041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
20, 67
               

               
Conread position:
               
316-767
               

               
Cow position:
               
chr28:16919413-16918971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 116
               

               
Conread position:
               
316-767
               

               
Cow position:
               
chr28:34229980-34230434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 114
               

               
Conread position:
               
316-768
               

               
Cow position:
               
chr28:23007977-23007538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 89
               

               
Conread position:
               
316-782
               

               
Cow position:
               
chr28:23530615-23531081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
24, 61
               

               
Conread position:
               
317-585
               

               
Cow position:
               
chr28:4022135-4022406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
23, 8
               

               
Conread position:
               
317-594
               

               
Cow position:
               
chr28:32300608-32300328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
19, 113
               

               
Conread position:
               
319-505
               

               
Cow position:
               
chr28:16441141-16441324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
21, 57
               

               
Conread position:
               
319-549
               

               
Cow position:
               
chr28:23621302-23621529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
24, 109
               

               
Conread position:
               
319-610
               

               
Cow position:
               
chr28:8682097-8681798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
21, 77
               

               
Conread position:
               
319-679
               

               
Cow position:
               
chr28:28163848-28164196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 22
               

               
Conread position:
               
319-693
               

               
Cow position:
               
chr28:34561112-34561469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
19, 77
               

               
Conread position:
               
319-698
               

               
Cow position:
               
chr28:11752391-11752008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 177
               

               
Conread position:
               
319-701
               

               
Cow position:
               
chr28:20313029-20313411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 53
               

               
Conread position:
               
319-703
               

               
Cow position:
               
chr28:8022357-8021966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 65
               

               
Conread position:
               
319-756
               

               
Cow position:
               
chr28:3914464-3914897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 105
               

               
Conread position:
               
319-762
               

               
Cow position:
               
chr28:22323019-22323457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 104
               

               
Conread position:
               
319-764
               

               
Cow position:
               
chr28:6059719-6059271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 170
               

               
Conread position:
               
319-764
               

               
Cow position:
               
chr28:13474060-13474499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 85
               

               
Conread position:
               
319-767
               

               
Cow position:
               
chr28:5826702-5827134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
19, 70
               

               
Conread position:
               
319-767
               

               
Cow position:
               
chr28:11585454-11585006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 95
               

               
Conread position:
               
319-767
               

               
Cow position:
               
chr28:20124539-20124984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 88
               

               
Conread position:
               
319-767
               

               
Cow position:
               
chr28:21868206-21868660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 227
               

               
Conread position:
               
319-767
               

               
Cow position:
               
chr28:33884163-33884606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 58
               

               
Conread position:
               
319-770
               

               
Cow position:
               
chr28:16204576-16204124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 14
               

               
Conread position:
               
320-551
               

               
Cow position:
               
chr28:17029960-17029733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
20, 90
               

               
Conread position:
               
320-579
               

               
Cow position:
               
chr28:16364216-16363953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
25, 88
               

               
Conread position:
               
320-679
               

               
Cow position:
               
chr28:14649102-14649453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 86
               

               
Conread position:
               
320-752
               

               
Cow position:
               
chr28:16346771-16346350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 100
               

               
Conread position:
               
320-767
               

               
Cow position:
               
chr28:4070724-4071161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 85
               

               
Conread position:
               
320-767
               

               
Cow position:
               
chr28:4282737-4282286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 110
               

               
Conread position:
               
320-767
               

               
Cow position:
               
chr28:22371921-22371472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 21
               

               
Conread position:
               
320-769
               

               
Cow position:
               
chr28:12430363-12430811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 96
               

               
Conread position:
               
321-578
               

               
Cow position:
               
chr28:26784711-26784452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 104
               

               
Conread position:
               
321-682
               

               
Cow position:
               
chr28:13865601-13865954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
13, 70
               

               
Conread position:
               
321-682
               

               
Cow position:
               
chr28:16085080-16085440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
15, 75
               

               
Conread position:
               
321-759
               

               
Cow position:
               
chr28:7144544-7144995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
19, 92
               

               
Conread position:
               
321-760
               

               
Cow position:
               
chr28:24343125-24343549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
101, 38
               

               
Conread position:
               
321-767
               

               
Cow position:
               
chr28:23793545-23793117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
269, 106
               

               
Conread position:
               
322-576
               

               
Cow position:
               
chr28:6577412-6577650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
15, 69
               

               
Conread position:
               
322-677
               

               
Cow position:
               
chr28:5128970-5128618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 36
               

               
Conread position:
               
322-691
               

               
Cow position:
               
chr28:13176922-13176565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
15, 139
               

               
Conread position:
               
325-610
               

               
Cow position:
               
chr28:4587860-4588142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 23
               

               
Conread position:
               
325-647
               

               
Cow position:
               
chr28:10529723-10529409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
13, 92
               

               
Conread position:
               
325-748
               

               
Cow position:
               
chr28:22332309-22332714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 40
               

               
Conread position:
               
325-764
               

               
Cow position:
               
chr28:22345779-22346222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 40
               

               
Conread position:
               
325-765
               

               
Cow position:
               
chr28:4308138-4307692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
15, 25
               

               
Conread position:
               
325-767
               

               
Cow position:
               
chr28:11423044-11422616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 37
               

               
Conread position:
               
325-767
               

               
Cow position:
               
chr28:24966148-24966589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 84
               

               
Conread position:
               
326-680
               

               
Cow position:
               
chr28:18934214-18934567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
14, 103
               

               
Conread position:
               
326-702
               

               
Cow position:
               
chr28:2961061-2960696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 25
               

               
Conread position:
               
326-751
               

               
Cow position:
               
chr28:31841579-31841160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 175
               

               
Conread position:
               
326-767
               

               
Cow position:
               
chr28:9636696-9636254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 166
               

               
Conread position:
               
328-523
               

               
Cow position:
               
chr28:5658317-5658510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 67
               

               
Conread position:
               
328-558
               

               
Cow position:
               
chr28:23775808-23776039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 162
               

               
Conread position:
               
328-696
               

               
Cow position:
               
chr28:15044092-15043735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 46
               

               
Conread position:
               
328-766
               

               
Cow position:
               
chr28:9285615-9285175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 266
               

               
Conread position:
               
329-523
               

               
Cow position:
               
chr28:17625370-17625173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
95, 12
               

               
Conread position:
               
329-553
               

               
Cow position:
               
chr28:34082258-34082025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
7, 113
               

               
Conread position:
               
329-652
               

               
Cow position:
               
chr28:21380641-21380967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 12
               

               
Conread position:
               
329-765
               

               
Cow position:
               
chr28:12951198-12951617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 80
               

               
Conread position:
               
329-767
               

               
Cow position:
               
chr28:10606854-10606435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
118, 30
               

               
Conread position:
               
332-766
               

               
Cow position:
               
chr28:34430658-34430221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 199
               

               
Conread position:
               
332-768
               

               
Cow position:
               
chr28:9099703-9100132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 109
               

               
Conread position:
               
334-767
               

               
Cow position:
               
chr28:8347505-8347937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 67
               

               
Conread position:
               
335-586
               

               
Cow position:
               
chr28:10762445-10762680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
135, 75
               

               
Conread position:
               
335-679
               

               
Cow position:
               
chr28:18591042-18591382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 25
               

               
Conread position:
               
335-767
               

               
Cow position:
               
chr28:5144751-5144311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 69
               

               
Conread position:
               
335-767
               

               
Cow position:
               
chr28:11884751-11884328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 59
               

               
Conread position:
               
335-767
               

               
Cow position:
               
chr28:26340108-26340537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
89, 148
               

               
Conread position:
               
335-777
               

               
Cow position:
               
chr28:33163696-33163261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 258
               

               
Conread position:
               
336-568
               

               
Cow position:
               
chr28:6861727-6861956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
32, 23
               

               
Conread position:
               
338-765
               

               
Cow position:
               
chr28:4016304-4016724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 21
               

               
Conread position:
               
341-690
               

               
Cow position:
               
chr28:4188311-4188676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 62
               

               
Conread position:
               
342-655
               

               
Cow position:
               
chr28:18625001-18625323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
82, 97
               

               
Conread position:
               
343-532
               

               
Cow position:
               
chr28:5188622-5188436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
120, 68
               

               
Conread position:
               
344-540
               

               
Cow position:
               
chr28:9108222-9108422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
344-554
               

               
Cow position:
               
chr28:34208482-34208696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
19, 93
               

               
Conread position:
               
344-767
               

               
Cow position:
               
chr28:5074724-5074318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 59
               

               
Conread position:
               
344-767
               

               
Cow position:
               
chr28:10053558-10053129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 47
               

               
Conread position:
               
345-767
               

               
Cow position:
               
chr28:25973311-25973745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
79, 168
               

               
Conread position:
               
348-671
               

               
Cow position:
               
chr28:24017788-24018088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
114, 45
               

               
Conread position:
               
353-621
               

               
Cow position:
               
chr28:3714591-3714854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
122, 69
               

               
Conread position:
               
354-767
               

               
Cow position:
               
chr28:4884476-4884050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 141
               

               
Conread position:
               
354-767
               

               
Cow position:
               
chr28:5437301-5436883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 237
               

               
Conread position:
               
359-767
               

               
Cow position:
               
chr28:4090249-4089858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 52
               

               
Conread position:
               
360-586
               

               
Cow position:
               
chr28:22739597-22739811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
100, 28
               

               
Conread position:
               
360-765
               

               
Cow position:
               
chr28:19054813-19055218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
105, 64
               

               
Conread position:
               
363-551
               

               
Cow position:
               
chr28:25459325-25459514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
43, 64
               

               
Conread position:
               
363-677
               

               
Cow position:
               
chr28:14512325-14512643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
96, 43
               

               
Conread position:
               
364-531
               

               
Cow position:
               
chr28:8935734-8935901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
59, 147
               

               
Conread position:
               
364-667
               

               
Cow position:
               
chr28:18186345-18186656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
33, 206
               

               
Conread position:
               
364-765
               

               
Cow position:
               
chr28:27313948-27313528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
60, 160
               

               
Conread position:
               
365-746
               

               
Cow position:
               
chr28:4138868-4138485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
98, 54
               

               
Conread position:
               
365-767
               

               
Cow position:
               
chr28:4158753-4159167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 26
               

               
Conread position:
               
366-679
               

               
Cow position:
               
chr28:3169389-3169077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
6, 28
               

               
Conread position:
               
366-767
               

               
Cow position:
               
chr28:4809596-4809973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 103
               

               
Conread position:
               
369-767
               

               
Cow position:
               
chr28:4881440-4881046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
10, 43
               

               
Conread position:
               
371-761
               

               
Cow position:
               
chr28:4835038-4834646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 137
               

               
Conread position:
               
372-763
               

               
Cow position:
               
chr28:26982938-26982537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 171
               

               
Conread position:
               
374-767
               

               
Cow position:
               
chr28:23724645-23724266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
89, 45
               

               
Conread position:
               
376-585
               

               
Cow position:
               
chr28:118243-118032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
48, 66
               

               
Conread position:
               
377-767
               

               
Cow position:
               
chr28:11829129-11828756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 122
               

               
Conread position:
               
378-585
               

               
Cow position:
               
chr28:19023947-19024163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
46, 117
               

               
Conread position:
               
378-699
               

               
Cow position:
               
chr28:18760228-18759925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
85, 28
               

               
Conread position:
               
378-765
               

               
Cow position:
               
chr28:11866855-11866467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 100
               

               
Conread position:
               
378-767
               

               
Cow position:
               
chr28:6091174-6091559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 119
               

               
Conread position:
               
378-767
               

               
Cow position:
               
chr28:30937852-30937480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 128
               

               
Conread position:
               
379-570
               

               
Cow position:
               
chr28:13290319-13290126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
45, 26
               

               
Conread position:
               
380-757
               

               
Cow position:
               
chr28:9684504-9684144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 102
               

               
Conread position:
               
384-702
               

               
Cow position:
               
chr28:2132102-2131789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 61
               

               
Conread position:
               
386-757
               

               
Cow position:
               
chr28:657625-657273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
22, 36
               

               
Conread position:
               
393-680
               

               
Cow position:
               
chr28:32365674-32365956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
7, 26
               

               
Conread position:
               
398-764
               

               
Cow position:
               
chr28:20409222-20409591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
8, 111
               

               
Conread position:
               
398-767
               

               
Cow position:
               
chr28:8291266-8291616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
26, 61
               

               
Conread position:
               
399-767
               

               
Cow position:
               
chr28:5199664-5200030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
195, 20
               

               
Conread position:
               
399-767
               

               
Cow position:
               
chr28:29989281-29988905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 101
               

               
Conread position:
               
405-764
               

               
Cow position:
               
chr28:5193158-5193523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
29, 37
               

               
Conread position:
               
405-765
               

               
Cow position:
               
chr28:7439083-7439440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
19, 79
               

               
Conread position:
               
409-673
               

               
Cow position:
               
chr28:2872760-2873025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
14, 6
               

               
Conread position:
               
413-764
               

               
Cow position:
               
chr28:24082116-24082470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 15
               

               
Conread position:
               
414-586
               

               
Cow position:
               
chr28:7608133-7607957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
416-765
               

               
Cow position:
               
chr28:30746879-30746537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
6, 105
               

               
Conread position:
               
420-701
               

               
Cow position:
               
chr28:4355402-4355680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
49, 80
               

               
Conread position:
               
421-767
               

               
Cow position:
               
chr28:10863927-10863597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
219, 47
               

               
Conread position:
               
422-766
               

               
Cow position:
               
chr28:11079165-11079502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
48, 8
               

               
Conread position:
               
426-702
               

               
Cow position:
               
chr28:27161470-27161192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
49, 19
               

               
Conread position:
               
426-765
               

               
Cow position:
               
chr28:10057732-10057386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
34, 118
               

               
Conread position:
               
426-767
               

               
Cow position:
               
chr28:3740744-3741072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
217, 38
               

               
Conread position:
               
429-767
               

               
Cow position:
               
chr28:7009112-7008778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
209, 108
               

               
Conread position:
               
429-767
               

               
Cow position:
               
chr28:19262726-19262381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
26, 88
               

               
Conread position:
               
431-765
               

               
Cow position:
               
chr28:3449164-3449510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
35, 112
               

               
Conread position:
               
434-767
               

               
Cow position:
               
chr28:8140350-8140687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 96
               

               
Conread position:
               
437-767
               

               
Cow position:
               
chr28:11346614-11346286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
18, 84
               

               
Conread position:
               
439-764
               

               
Cow position:
               
chr28:19564353-19564035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
87, 48
               

               
Conread position:
               
440-767
               

               
Cow position:
               
chr28:22813141-22813451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
17, 27
               

               
Conread position:
               
442-696
               

               
Cow position:
               
chr28:32174507-32174758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
148, 97
               

               
Conread position:
               
451-762
               

               
Cow position:
               
chr28:25128768-25129082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
17, 140
               

               
Conread position:
               
454-767
               

               
Cow position:
               
chr28:3484467-3484789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
83, 121
               

               
Conread position:
               
462-688
               

               
Cow position:
               
chr28:7372224-7372001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
178, 63
               

               
Conread position:
               
462-767
               

               
Cow position:
               
chr28:5577423-5577735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
128, 65
               

               
Conread position:
               
466-765
               

               
Cow position:
               
chr28:3011371-3011066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
79, 126
               

               
Conread position:
               
468-682
               

               
Cow position:
               
chr28:16246159-16245950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
62, 27
               

               
Conread position:
               
474-767
               

               
Cow position:
               
chr28:7927084-7927364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
107, 111
               

               
Conread position:
               
478-767
               

               
Cow position:
               
chr28:7350571-7350853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
165, 50
               

               
Conread position:
               
481-757
               

               
Cow position:
               
chr28:4045769-4046037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
163, 35
               

               
Conread position:
               
482-767
               

               
Cow position:
               
chr28:4181921-4182204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
158, 46
               

               
Conread position:
               
483-699
               

               
Cow position:
               
chr28:12070154-12070363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
64, 23
               

               
Conread position:
               
483-767
               

               
Cow position:
               
chr28:5139078-5138796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 108
               

               
Conread position:
               
486-767
               

               
Cow position:
               
chr28:11348351-11348629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
154, 27
               

               
Conread position:
               
487-767
               

               
Cow position:
               
chr28:7619230-7618957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
156, 101
               

               
Conread position:
               
491-767
               

               
Cow position:
               
chr28:3411066-3410786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
9, 100
               

               
Conread position:
               
494-782
               

               
Cow position:
               
chr28:17012362-17012087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
496-767
               

               
Cow position:
               
chr28:20759770-20759490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
94, 44
               

               
Conread position:
               
498-767
               

               
Cow position:
               
chr28:4013020-4013286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 30
               

               
Conread position:
               
499-767
               

               
Cow position:
               
chr28:777602-777879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
22, 94
               

               
Conread position:
               
511-696
               

               
Cow position:
               
chr28:4438656-4438838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
130, 17
               

               
Conread position:
               
513-679
               

               
Cow position:
               
chr28:2762142-2762307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
128, 15
               

               
Conread position:
               
514-767
               

               
Cow position:
               
chr28:3726264-3726005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
72, 147
               

               
Conread position:
               
528-702
               

               
Cow position:
               
chr28:7498187-7498012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
22, 64
               

               
Conread position:
               
528-767
               

               
Cow position:
               
chr28:17739786-17740028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
112, 60
               

               
Conread position:
               
530-767
               

               
Cow position:
               
chr28:11816702-11816481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
110, 12
               

               
Conread position:
               
536-767
               

               
Cow position:
               
chr28:5205240-5205454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
107, 55
               

               
Conread position:
               
540-765
               

               
Cow position:
               
chr28:6975214-6975435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
103, 43
               

               
Conread position:
               
540-766
               

               
Cow position:
               
chr28:24646566-24646785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
103, 53
               

               
Conread position:
               
540-767
               

               
Cow position:
               
chr28:9705626-9705859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
103, 43
               

               
Conread position:
               
540-767
               

               
Cow position:
               
chr28:12991109-12991338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
48, 121
               

               
Conread position:
               
540-767
               

               
Cow position:
               
chr28:32358084-32358307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
103, 8
               

               
Conread position:
               
541-767
               

               
Cow position:
               
chr28:17949139-17948914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
102, 47
               

               
Conread position:
               
542-764
               

               
Cow position:
               
chr28:19216796-19217012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
15, 47
               

               
Conread position:
               
542-765
               

               
Cow position:
               
chr28:5630073-5630300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
141, 49
               

               
Conread position:
               
542-767
               

               
Cow position:
               
chr28:11987149-11987366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
48, 77
               

               
Conread position:
               
542-767
               

               
Cow position:
               
chr28:12055387-12055604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
48, 77
               

               
Conread position:
               
543-767
               

               
Cow position:
               
chr28:4006761-4006984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
9, 49
               

               
Conread position:
               
544-764
               

               
Cow position:
               
chr28:8304224-8304442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
99, 64
               

               
Conread position:
               
544-796
               

               
Cow position:
               
chr28:7132111-7131859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
7, 54
               

               
Conread position:
               
547-765
               

               
Cow position:
               
chr28:5254854-5255072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
94, 41
               

               
Conread position:
               
548-763
               

               
Cow position:
               
chr28:11016389-11016603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
69, 26
               

               
Conread position:
               
548-767
               

               
Cow position:
               
chr28:4101501-4101715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
42, 113
               

               
Conread position:
               
549-765
               

               
Cow position:
               
chr28:5231920-5232141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
90, 41
               

               
Conread position:
               
553-767
               

               
Cow position:
               
chr28:29850829-29850619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
90, 35
               

               
Conread position:
               
560-765
               

               
Cow position:
               
chr28:15362572-15362779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
79, 31
               

               
Conread position:
               
560-767
               

               
Cow position:
               
chr28:8396328-8396528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
80, 28
               

               
Conread position:
               
563-752
               

               
Cow position:
               
chr28:16879569-16879756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
80, 24
               

               
Conread position:
               
563-767
               

               
Cow position:
               
chr28:5805667-5805865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
73, 25
               

               
Conread position:
               
563-767
               

               
Cow position:
               
chr28:30902122-30902324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
80, 28
               

               
Conread position:
               
564-765
               

               
Cow position:
               
chr28:6563901-6563693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
57, 24
               

               
Conread position:
               
566-764
               

               
Cow position:
               
chr28:4877432-4877232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
77, 22
               

               
Conread position:
               
567-767
               

               
Cow position:
               
chr28:7557734-7557524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
76, 20
               

               
Conread position:
               
570-767
               

               
Cow position:
               
chr28:17680625-17680828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
73, 21
               

               
Conread position:
               
571-767
               

               
Cow position:
               
chr28:2777534-2777733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
69, 17
               

               
Conread position:
               
572-767
               

               
Cow position:
               
chr28:24996608-24996415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
71, 19
               

               
Conread position:
               
573-767
               

               
Cow position:
               
chr28:4876449-4876641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
70, 15
               

               
Conread position:
               
573-767
               

               
Cow position:
               
chr28:9109222-9109414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
70, 26
               

               
Conread position:
               
574-765
               

               
Cow position:
               
chr28:117756-117557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
65, 17
               

               
Conread position:
               
575-765
               

               
Cow position:
               
chr28:10890727-10890541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
67, 16
               

               
Conread position:
               
582-767
               

               
Cow position:
               
chr28:17943745-17943927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
60, 5
               

               
Conread position:
               
585-767
               

               
Cow position:
               
chr28:2151423-2151237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
55, 72
               

               
Conread position:
               
588-766
               

               
Cow position:
               
chr28:10203139-10203314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
55, 72
               

               
Conread position:
               
593-767
               

               
Cow position:
               
chr28:3678387-3678562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
50, 67
               

               
Conread position:
               
599-767
               

               
Cow position:
               
chr28:4027431-4027266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
44, 10
               

               
Conread position:
               
601-765
               

               
Cow position:
               
chr28:2077533-2077702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
42, 59
               

               
Conread position:
               
601-767
               

               
Cow position:
               
chr28:8936183-8936351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
42, 66
               

               
Conread position:
               
602-765
               

               
Cow position:
               
chr28:4163549-4163379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
39, 58
               

               
Conread position:
               
602-765
               

               
Cow position:
               
chr28:5609883-5609717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
43, 58
               

               
Conread position:
               
602-765
               

               
Cow position:
               
chr28:5673909-5674073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
41, 58
               

               
Conread position:
               
602-767
               

               
Cow position:
               
chr28:10958836-10959002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
41, 57
               

               
Conread position:
               
602-767
               

               
Cow position:
               
chr28:21008631-21008468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
41, 21
               

               
Conread position:
               
603-764
               

               
Cow position:
               
chr28:13269762-13269918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
40, 57
               

               
Conread position:
               
603-767
               

               
Cow position:
               
chr28:8681395-8681234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
40, 57
               

               
Conread position:
               
603-767
               

               
Cow position:
               
chr28:26868116-26867951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
38, 57
               

               
Conread position:
               
604-765
               

               
Cow position:
               
chr28:32014820-32014986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
41, 56
               

               
Conread position:
               
605-764
               

               
Cow position:
               
chr28:26960872-26960713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
34, 55
               

               
Conread position:
               
605-767
               

               
Cow position:
               
chr28:10762931-10763091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
38, 55
               

               
Conread position:
               
608-767
               

               
Cow position:
               
chr28:18791079-18791237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
31, 6
               

               
Conread position:
               
609-767
               

               
Cow position:
               
chr28:3759031-3759200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
34, 51
               

               
Conread position:
               
612-766
               

               
Cow position:
               
chr28:4866529-4866376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
31, 48
               

               
Conread position:
               
616-767
               

               
Cow position:
               
chr28:24238429-24238281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
27, 47
               

               
Conread position:
               
619-767
               

               
Cow position:
               
chr28:4588369-4588517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
24, 41
               

               
Conread position:
               
620-767
               

               
Cow position:
               
chr28:21263209-21263357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
23, 40
               

               
Conread position:
               
624-764
               

               
Cow position:
               
chr28:7750960-7750821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
19, 36
               

               
Conread position:
               
626-763
               

               
Cow position:
               
chr28:3257046-3257189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
17, 37
               

               
Conread position:
               
657-765
               

               
Cow position:
               
chr28:4375533-4375425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
109
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               
Show alignments to all cow chromosomes.