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Cow genome map

           
Conread name:
           
Spl1-SPL01F070090
        

               
Conread position:
               
57-532
               

               
Cow position:
               
chr3:44623412-44622946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 43
               

               
Conread position:
               
59-509
               

               
Cow position:
               
chr3:34392619-34392181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
164, 55
               

               
Conread position:
               
59-516
               

               
Cow position:
               
chr3:56705088-56704621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 255
               

               
Conread position:
               
59-698
               

               
Cow position:
               
chr3:4031413-4032065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
667
               

               
Alignm identity:
               
468
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 384
               

               
Conread position:
               
59-752
               

               
Cow position:
               
chr3:68628203-68627528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
706
               

               
Alignm identity:
               
501
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 199
               

               
Conread position:
               
59-753
               

               
Cow position:
               
chr3:45647153-45647826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
708
               

               
Alignm identity:
               
526
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 134
               

               
Conread position:
               
59-767
               

               
Cow position:
               
chr3:14602249-14601538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
735
               

               
Alignm identity:
               
528
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 49
               

               
Conread position:
               
59-767
               

               
Cow position:
               
chr3:29360663-29359990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
715
               

               
Alignm identity:
               
498
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 33
               

               
Conread position:
               
59-767
               

               
Cow position:
               
chr3:73467079-73467800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
734
               

               
Alignm identity:
               
521
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 215
               

               
Conread position:
               
62-533
               

               
Cow position:
               
chr3:25691231-25691694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 76
               

               
Conread position:
               
62-766
               

               
Cow position:
               
chr3:64281446-64280765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
712
               

               
Alignm identity:
               
510
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
280, 9
               

               
Conread position:
               
64-767
               

               
Cow position:
               
chr3:39970398-39969689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
726
               

               
Alignm identity:
               
531
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 179
               

               
Conread position:
               
74-680
               

               
Cow position:
               
chr3:64171917-64172524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
625
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
114, 77
               

               
Conread position:
               
80-553
               

               
Cow position:
               
chr3:48630101-48629635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 151
               

               
Conread position:
               
90-512
               

               
Cow position:
               
chr3:51609296-51609740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
117-707
               

               
Cow position:
               
chr3:56059342-56059922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
603
               

               
Alignm identity:
               
452
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 149
               

               
Conread position:
               
151-694
               

               
Cow position:
               
chr3:38691857-38691308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
565
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 53
               

               
Conread position:
               
164-767
               

               
Cow position:
               
chr3:7331540-7330964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
612
               

               
Alignm identity:
               
428
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 100
               

               
Conread position:
               
166-649
               

               
Cow position:
               
chr3:37451642-37452122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 67
               

               
Conread position:
               
170-761
               

               
Cow position:
               
chr3:51234506-51233936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
599
               

               
Alignm identity:
               
407
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
241, 53
               

               
Conread position:
               
181-533
               

               
Cow position:
               
chr3:53510097-53509745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
80, 30
               

               
Conread position:
               
188-764
               

               
Cow position:
               
chr3:74532949-74533505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
585
               

               
Alignm identity:
               
441
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 68
               

               
Conread position:
               
197-641
               

               
Cow position:
               
chr3:73759904-73759473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 72
               

               
Conread position:
               
226-640
               

               
Cow position:
               
chr3:71430572-71430161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
198, 43
               

               
Conread position:
               
228-767
               

               
Cow position:
               
chr3:66885403-66884856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
556
               

               
Alignm identity:
               
390
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 40
               

               
Conread position:
               
275-621
               

               
Cow position:
               
chr3:81278023-81277674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 259
               

               
Conread position:
               
279-533
               

               
Cow position:
               
chr3:13577493-13577249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
180, 5
               

               
Conread position:
               
279-641
               

               
Cow position:
               
chr3:14633299-14632939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 45
               

               
Conread position:
               
280-702
               

               
Cow position:
               
chr3:8393625-8394050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
59, 133
               

               
Conread position:
               
281-764
               

               
Cow position:
               
chr3:57763911-57764384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 5
               

               
Conread position:
               
291-764
               

               
Cow position:
               
chr3:68146123-68145684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
172, 5
               

               
Conread position:
               
294-767
               

               
Cow position:
               
chr3:28908495-28908042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
48, 111
               

               
Conread position:
               
297-701
               

               
Cow position:
               
chr3:52017464-52017876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
121, 5
               

               
Conread position:
               
297-703
               

               
Cow position:
               
chr3:49650084-49650495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 5
               

               
Conread position:
               
297-765
               

               
Cow position:
               
chr3:79902207-79902669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 5
               

               
Conread position:
               
297-767
               

               
Cow position:
               
chr3:65058406-65058873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 5
               

               
Conread position:
               
297-767
               

               
Cow position:
               
chr3:69750997-69750561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 5
               

               
Conread position:
               
298-701
               

               
Cow position:
               
chr3:67704244-67704651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 125
               

               
Conread position:
               
299-585
               

               
Cow position:
               
chr3:82657381-82657098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
5, 109
               

               
Conread position:
               
299-676
               

               
Cow position:
               
chr3:61839995-61840355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
37, 5
               

               
Conread position:
               
299-749
               

               
Cow position:
               
chr3:55117267-55116821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
37, 238
               

               
Conread position:
               
299-751
               

               
Cow position:
               
chr3:49461233-49460768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 298
               

               
Conread position:
               
299-764
               

               
Cow position:
               
chr3:2397079-2396624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 219
               

               
Conread position:
               
299-767
               

               
Cow position:
               
chr3:49327650-49328108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 5
               

               
Conread position:
               
300-702
               

               
Cow position:
               
chr3:67544168-67543764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
38, 127
               

               
Conread position:
               
300-718
               

               
Cow position:
               
chr3:73708759-73709172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 32
               

               
Conread position:
               
300-763
               

               
Cow position:
               
chr3:55124572-55124115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 121
               

               
Conread position:
               
301-585
               

               
Cow position:
               
chr3:81939958-81940247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
39, 244
               

               
Conread position:
               
302-506
               

               
Cow position:
               
chr3:54340708-54340499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
38, 171
               

               
Conread position:
               
302-581
               

               
Cow position:
               
chr3:77496525-77496814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
302-610
               

               
Cow position:
               
chr3:72018831-72019132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
161, 30
               

               
Conread position:
               
302-701
               

               
Cow position:
               
chr3:12712215-12711810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 295
               

               
Conread position:
               
302-760
               

               
Cow position:
               
chr3:72123-72587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
38, 94
               

               
Conread position:
               
302-763
               

               
Cow position:
               
chr3:54903281-54903737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
122, 30
               

               
Conread position:
               
302-767
               

               
Cow position:
               
chr3:27274248-27274701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 53
               

               
Conread position:
               
302-782
               

               
Cow position:
               
chr3:59604579-59605031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 93
               

               
Conread position:
               
303-691
               

               
Cow position:
               
chr3:4049922-4050288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
154, 36
               

               
Conread position:
               
303-741
               

               
Cow position:
               
chr3:23876707-23877148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
37, 108
               

               
Conread position:
               
304-701
               

               
Cow position:
               
chr3:48296421-48296803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
163, 123
               

               
Conread position:
               
306-523
               

               
Cow position:
               
chr3:59205953-59206175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
307-586
               

               
Cow position:
               
chr3:59514824-59515094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
33, 108
               

               
Conread position:
               
307-767
               

               
Cow position:
               
chr3:53221732-53222186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 34
               

               
Conread position:
               
307-767
               

               
Cow position:
               
chr3:74233914-74234355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 9
               

               
Conread position:
               
309-767
               

               
Cow position:
               
chr3:3985045-3985491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 112
               

               
Conread position:
               
309-767
               

               
Cow position:
               
chr3:75570726-75570272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
31, 66
               

               
Conread position:
               
310-751
               

               
Cow position:
               
chr3:74600833-74601270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 86
               

               
Conread position:
               
311-702
               

               
Cow position:
               
chr3:14263109-14263498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
25, 118
               

               
Conread position:
               
313-553
               

               
Cow position:
               
chr3:59701730-59701964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
13, 97
               

               
Conread position:
               
313-767
               

               
Cow position:
               
chr3:18393661-18393226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 19
               

               
Conread position:
               
313-767
               

               
Cow position:
               
chr3:45881628-45882073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 108
               

               
Conread position:
               
313-767
               

               
Cow position:
               
chr3:83442160-83441719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 54
               

               
Conread position:
               
314-576
               

               
Cow position:
               
chr3:61191197-61190944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
24, 86
               

               
Conread position:
               
314-584
               

               
Cow position:
               
chr3:49793135-49793384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
314-679
               

               
Cow position:
               
chr3:59798974-59799331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 75
               

               
Conread position:
               
314-697
               

               
Cow position:
               
chr3:57624183-57624565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 95
               

               
Conread position:
               
314-767
               

               
Cow position:
               
chr3:23408622-23408190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 80
               

               
Conread position:
               
314-767
               

               
Cow position:
               
chr3:48252617-48253053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
36, 26
               

               
Conread position:
               
315-500
               

               
Cow position:
               
chr3:8753185-8753374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
28, 168
               

               
Conread position:
               
315-509
               

               
Cow position:
               
chr3:45312775-45312966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
28, 120
               

               
Conread position:
               
315-512
               

               
Cow position:
               
chr3:26493503-26493302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
315-514
               

               
Cow position:
               
chr3:26894389-26894582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
109, 25
               

               
Conread position:
               
315-516
               

               
Cow position:
               
chr3:7678394-7678591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
146, 94
               

               
Conread position:
               
315-516
               

               
Cow position:
               
chr3:42588070-42588280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
27, 116
               

               
Conread position:
               
315-520
               

               
Cow position:
               
chr3:18854814-18855022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
21, 85
               

               
Conread position:
               
315-521
               

               
Cow position:
               
chr3:11640155-11640361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
25, 90
               

               
Conread position:
               
315-523
               

               
Cow position:
               
chr3:3164775-3164565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
22, 112
               

               
Conread position:
               
315-523
               

               
Cow position:
               
chr3:22170910-22171117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
25, 99
               

               
Conread position:
               
315-523
               

               
Cow position:
               
chr3:42603551-42603760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
25, 82
               

               
Conread position:
               
315-523
               

               
Cow position:
               
chr3:62883923-62884135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
27, 82
               

               
Conread position:
               
315-530
               

               
Cow position:
               
chr3:79148555-79148332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
315-533
               

               
Cow position:
               
chr3:22872331-22872107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
23, 95
               

               
Conread position:
               
315-540
               

               
Cow position:
               
chr3:49218586-49218367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
25, 58
               

               
Conread position:
               
315-548
               

               
Cow position:
               
chr3:19708378-19708150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
25, 33
               

               
Conread position:
               
315-548
               

               
Cow position:
               
chr3:42177881-42178109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
100, 110
               

               
Conread position:
               
315-549
               

               
Cow position:
               
chr3:49140326-49140085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
80, 25
               

               
Conread position:
               
315-555
               

               
Cow position:
               
chr3:61678412-61678658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
30, 103
               

               
Conread position:
               
315-584
               

               
Cow position:
               
chr3:49731916-49731651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
25, 105
               

               
Conread position:
               
315-585
               

               
Cow position:
               
chr3:364498-364223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
21, 222
               

               
Conread position:
               
315-585
               

               
Cow position:
               
chr3:27285946-27286218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
21, 209
               

               
Conread position:
               
315-585
               

               
Cow position:
               
chr3:27544608-27544345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
25, 90
               

               
Conread position:
               
315-586
               

               
Cow position:
               
chr3:57554126-57553858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
22, 76
               

               
Conread position:
               
315-594
               

               
Cow position:
               
chr3:8147942-8147670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
34, 26
               

               
Conread position:
               
315-634
               

               
Cow position:
               
chr3:12675318-12675006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
22, 104
               

               
Conread position:
               
315-635
               

               
Cow position:
               
chr3:33698442-33698769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
21, 221
               

               
Conread position:
               
315-640
               

               
Cow position:
               
chr3:46350377-46350714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
33, 227
               

               
Conread position:
               
315-654
               

               
Cow position:
               
chr3:79592168-79591832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 204
               

               
Conread position:
               
315-655
               

               
Cow position:
               
chr3:20129662-20129995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
21, 107
               

               
Conread position:
               
315-655
               

               
Cow position:
               
chr3:61857217-61857566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
24, 283
               

               
Conread position:
               
315-656
               

               
Cow position:
               
chr3:75727868-75727521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
25, 218
               

               
Conread position:
               
315-669
               

               
Cow position:
               
chr3:75711040-75711379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 70
               

               
Conread position:
               
315-670
               

               
Cow position:
               
chr3:61539517-61539875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
21, 280
               

               
Conread position:
               
315-675
               

               
Cow position:
               
chr3:56648-56298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
325, 82
               

               
Conread position:
               
315-676
               

               
Cow position:
               
chr3:72675808-72676171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 228
               

               
Conread position:
               
315-682
               

               
Cow position:
               
chr3:2216081-2216454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 219
               

               
Conread position:
               
315-683
               

               
Cow position:
               
chr3:53112889-53113262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 233
               

               
Conread position:
               
315-685
               

               
Cow position:
               
chr3:26920618-26920999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 35
               

               
Conread position:
               
315-687
               

               
Cow position:
               
chr3:34270652-34271005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
25, 47
               

               
Conread position:
               
315-687
               

               
Cow position:
               
chr3:59208535-59208885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 98
               

               
Conread position:
               
315-692
               

               
Cow position:
               
chr3:66292457-66292080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 109
               

               
Conread position:
               
315-694
               

               
Cow position:
               
chr3:55272319-55271947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 9
               

               
Conread position:
               
315-696
               

               
Cow position:
               
chr3:39171763-39171390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
17, 111
               

               
Conread position:
               
315-696
               

               
Cow position:
               
chr3:70401624-70401996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 105
               

               
Conread position:
               
315-697
               

               
Cow position:
               
chr3:5101039-5100671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
21, 35
               

               
Conread position:
               
315-697
               

               
Cow position:
               
chr3:61278627-61279009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
27, 112
               

               
Conread position:
               
315-699
               

               
Cow position:
               
chr3:73443366-73442995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 106
               

               
Conread position:
               
315-701
               

               
Cow position:
               
chr3:81371377-81371754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 81
               

               
Conread position:
               
315-702
               

               
Cow position:
               
chr3:52863462-52863077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 36
               

               
Conread position:
               
315-702
               

               
Cow position:
               
chr3:59630779-59630407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
21, 99
               

               
Conread position:
               
315-702
               

               
Cow position:
               
chr3:62789483-62789069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
23, 300
               

               
Conread position:
               
315-702
               

               
Cow position:
               
chr3:80581392-80581759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 102
               

               
Conread position:
               
315-713
               

               
Cow position:
               
chr3:42423610-42423214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
21, 94
               

               
Conread position:
               
315-723
               

               
Cow position:
               
chr3:6689712-6690133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
21, 237
               

               
Conread position:
               
315-728
               

               
Cow position:
               
chr3:70566017-70565599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 90
               

               
Conread position:
               
315-733
               

               
Cow position:
               
chr3:26682072-26681674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
25, 110
               

               
Conread position:
               
315-753
               

               
Cow position:
               
chr3:7566698-7566261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 100
               

               
Conread position:
               
315-756
               

               
Cow position:
               
chr3:53046936-53046495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 90
               

               
Conread position:
               
315-757
               

               
Cow position:
               
chr3:59001024-59000599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 111
               

               
Conread position:
               
315-760
               

               
Cow position:
               
chr3:17222423-17221966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 76
               

               
Conread position:
               
315-760
               

               
Cow position:
               
chr3:80564684-80565132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 27
               

               
Conread position:
               
315-763
               

               
Cow position:
               
chr3:210043-210492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 91
               

               
Conread position:
               
315-763
               

               
Cow position:
               
chr3:22676361-22675937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
27, 52
               

               
Conread position:
               
315-763
               

               
Cow position:
               
chr3:30179803-30180253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 109
               

               
Conread position:
               
315-763
               

               
Cow position:
               
chr3:80071838-80072313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 284
               

               
Conread position:
               
315-764
               

               
Cow position:
               
chr3:18066855-18067301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 111
               

               
Conread position:
               
315-764
               

               
Cow position:
               
chr3:26903836-26904270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 106
               

               
Conread position:
               
315-764
               

               
Cow position:
               
chr3:49482983-49482543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
140, 34
               

               
Conread position:
               
315-764
               

               
Cow position:
               
chr3:53150048-53150504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 87
               

               
Conread position:
               
315-764
               

               
Cow position:
               
chr3:54434695-54435139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 107
               

               
Conread position:
               
315-764
               

               
Cow position:
               
chr3:54740150-54739729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
25, 100
               

               
Conread position:
               
315-764
               

               
Cow position:
               
chr3:70895767-70896210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 195
               

               
Conread position:
               
315-764
               

               
Cow position:
               
chr3:75158086-75158526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 92
               

               
Conread position:
               
315-765
               

               
Cow position:
               
chr3:15954356-15953910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 110
               

               
Conread position:
               
315-765
               

               
Cow position:
               
chr3:17957188-17957633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
27, 45
               

               
Conread position:
               
315-765
               

               
Cow position:
               
chr3:23169349-23168896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 188
               

               
Conread position:
               
315-765
               

               
Cow position:
               
chr3:31056281-31055841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
21, 200
               

               
Conread position:
               
315-765
               

               
Cow position:
               
chr3:53429170-53428746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
31, 87
               

               
Conread position:
               
315-765
               

               
Cow position:
               
chr3:59610995-59610547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 25
               

               
Conread position:
               
315-765
               

               
Cow position:
               
chr3:67929545-67929087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 51
               

               
Conread position:
               
315-765
               

               
Cow position:
               
chr3:68586759-68587191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 66
               

               
Conread position:
               
315-766
               

               
Cow position:
               
chr3:3032119-3032582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 24
               

               
Conread position:
               
315-766
               

               
Cow position:
               
chr3:10958507-10958071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 89
               

               
Conread position:
               
315-766
               

               
Cow position:
               
chr3:65236746-65237196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 75
               

               
Conread position:
               
315-766
               

               
Cow position:
               
chr3:79094349-79093888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 299
               

               
Conread position:
               
315-767
               

               
Cow position:
               
chr3:2674750-2675206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 106
               

               
Conread position:
               
315-767
               

               
Cow position:
               
chr3:13353081-13353538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 26
               

               
Conread position:
               
315-767
               

               
Cow position:
               
chr3:14552599-14553046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 98
               

               
Conread position:
               
315-767
               

               
Cow position:
               
chr3:15057877-15057468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
24, 90
               

               
Conread position:
               
315-767
               

               
Cow position:
               
chr3:20802908-20802466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 105
               

               
Conread position:
               
315-767
               

               
Cow position:
               
chr3:26065722-26066161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 115
               

               
Conread position:
               
315-767
               

               
Cow position:
               
chr3:29887703-29887266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 81
               

               
Conread position:
               
315-767
               

               
Cow position:
               
chr3:37041150-37041590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
241, 104
               

               
Conread position:
               
315-767
               

               
Cow position:
               
chr3:53739470-53739008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 230
               

               
Conread position:
               
315-767
               

               
Cow position:
               
chr3:53790823-53790368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 233
               

               
Conread position:
               
315-767
               

               
Cow position:
               
chr3:55190029-55189576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 90
               

               
Conread position:
               
315-767
               

               
Cow position:
               
chr3:55970228-55970689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 24
               

               
Conread position:
               
315-767
               

               
Cow position:
               
chr3:65413554-65413092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 67
               

               
Conread position:
               
315-767
               

               
Cow position:
               
chr3:67744907-67744466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 157
               

               
Conread position:
               
315-767
               

               
Cow position:
               
chr3:68881388-68880957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 25
               

               
Conread position:
               
315-767
               

               
Cow position:
               
chr3:75479733-75480172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 88
               

               
Conread position:
               
315-767
               

               
Cow position:
               
chr3:77365573-77365118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 76
               

               
Conread position:
               
315-767
               

               
Cow position:
               
chr3:78076910-78077364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 179
               

               
Conread position:
               
315-783
               

               
Cow position:
               
chr3:16752526-16752063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 25
               

               
Conread position:
               
316-506
               

               
Cow position:
               
chr3:8557059-8556872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
20, 77
               

               
Conread position:
               
316-519
               

               
Cow position:
               
chr3:53588668-53588460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
24, 80
               

               
Conread position:
               
316-523
               

               
Cow position:
               
chr3:56704132-56703924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
21, 101
               

               
Conread position:
               
316-567
               

               
Cow position:
               
chr3:7858074-7858343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
316-585
               

               
Cow position:
               
chr3:77227040-77227314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
26, 228
               

               
Conread position:
               
316-642
               

               
Cow position:
               
chr3:65800317-65800630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 25
               

               
Conread position:
               
316-677
               

               
Cow position:
               
chr3:55085462-55085088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
24, 91
               

               
Conread position:
               
316-679
               

               
Cow position:
               
chr3:5096925-5097290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 99
               

               
Conread position:
               
316-682
               

               
Cow position:
               
chr3:17895576-17895934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
24, 74
               

               
Conread position:
               
316-687
               

               
Cow position:
               
chr3:26219339-26218962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 221
               

               
Conread position:
               
316-702
               

               
Cow position:
               
chr3:13507189-13507574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 6
               

               
Conread position:
               
316-715
               

               
Cow position:
               
chr3:82460905-82461298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
23, 79
               

               
Conread position:
               
316-753
               

               
Cow position:
               
chr3:48241343-48241767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 97
               

               
Conread position:
               
316-757
               

               
Cow position:
               
chr3:53592978-53592522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 33
               

               
Conread position:
               
316-763
               

               
Cow position:
               
chr3:83455426-83454987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 15
               

               
Conread position:
               
316-764
               

               
Cow position:
               
chr3:64011093-64010637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
20, 12
               

               
Conread position:
               
316-765
               

               
Cow position:
               
chr3:2024906-2025375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 111
               

               
Conread position:
               
316-766
               

               
Cow position:
               
chr3:2630520-2630933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
18, 85
               

               
Conread position:
               
316-766
               

               
Cow position:
               
chr3:37186558-37186981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
214, 25
               

               
Conread position:
               
316-767
               

               
Cow position:
               
chr3:2393244-2392795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 112
               

               
Conread position:
               
316-767
               

               
Cow position:
               
chr3:5374057-5374483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 113
               

               
Conread position:
               
316-767
               

               
Cow position:
               
chr3:8393068-8393513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 209
               

               
Conread position:
               
316-767
               

               
Cow position:
               
chr3:9641286-9641729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 87
               

               
Conread position:
               
316-767
               

               
Cow position:
               
chr3:9663465-9662995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
20, 194
               

               
Conread position:
               
316-767
               

               
Cow position:
               
chr3:13330050-13329619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 90
               

               
Conread position:
               
316-767
               

               
Cow position:
               
chr3:50768401-50768853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 214
               

               
Conread position:
               
316-767
               

               
Cow position:
               
chr3:54782290-54781819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 48
               

               
Conread position:
               
316-767
               

               
Cow position:
               
chr3:65968877-65969348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 282
               

               
Conread position:
               
316-770
               

               
Cow position:
               
chr3:32584880-32585330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 107
               

               
Conread position:
               
317-692
               

               
Cow position:
               
chr3:26553984-26553617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
138, 23
               

               
Conread position:
               
317-759
               

               
Cow position:
               
chr3:31298437-31297991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
19, 205
               

               
Conread position:
               
317-767
               

               
Cow position:
               
chr3:29812967-29813400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 110
               

               
Conread position:
               
318-764
               

               
Cow position:
               
chr3:15052213-15051781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 22
               

               
Conread position:
               
318-767
               

               
Cow position:
               
chr3:15229095-15228667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 103
               

               
Conread position:
               
319-514
               

               
Cow position:
               
chr3:16004261-16004069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
17, 77
               

               
Conread position:
               
319-523
               

               
Cow position:
               
chr3:4223040-4223243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
21, 80
               

               
Conread position:
               
319-533
               

               
Cow position:
               
chr3:2483178-2483386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
21, 87
               

               
Conread position:
               
319-533
               

               
Cow position:
               
chr3:15661976-15661760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
20, 103
               

               
Conread position:
               
319-538
               

               
Cow position:
               
chr3:15081014-15080801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
21, 108
               

               
Conread position:
               
319-554
               

               
Cow position:
               
chr3:81473729-81473971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
21, 121
               

               
Conread position:
               
319-568
               

               
Cow position:
               
chr3:80082092-80081849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
17, 35
               

               
Conread position:
               
319-584
               

               
Cow position:
               
chr3:9843309-9843575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 192
               

               
Conread position:
               
319-594
               

               
Cow position:
               
chr3:39328137-39328399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
143, 49
               

               
Conread position:
               
319-615
               

               
Cow position:
               
chr3:5851202-5850911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 80
               

               
Conread position:
               
319-629
               

               
Cow position:
               
chr3:43528512-43528200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
21, 86
               

               
Conread position:
               
319-649
               

               
Cow position:
               
chr3:8457382-8457708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
21, 6
               

               
Conread position:
               
319-675
               

               
Cow position:
               
chr3:58969167-58968824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 13
               

               
Conread position:
               
319-678
               

               
Cow position:
               
chr3:19006392-19006739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
21, 102
               

               
Conread position:
               
319-679
               

               
Cow position:
               
chr3:62826898-62826536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 221
               

               
Conread position:
               
319-685
               

               
Cow position:
               
chr3:83816068-83815699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 142
               

               
Conread position:
               
319-699
               

               
Cow position:
               
chr3:3738216-3738582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 22
               

               
Conread position:
               
319-702
               

               
Cow position:
               
chr3:46900920-46901304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
21, 76
               

               
Conread position:
               
319-702
               

               
Cow position:
               
chr3:50069504-50069869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 74
               

               
Conread position:
               
319-718
               

               
Cow position:
               
chr3:28898497-28898094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 91
               

               
Conread position:
               
319-760
               

               
Cow position:
               
chr3:38863838-38864285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 106
               

               
Conread position:
               
319-762
               

               
Cow position:
               
chr3:58540805-58540348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 22
               

               
Conread position:
               
319-764
               

               
Cow position:
               
chr3:61169508-61169981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
20, 155
               

               
Conread position:
               
319-764
               

               
Cow position:
               
chr3:73764468-73764044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 22
               

               
Conread position:
               
319-764
               

               
Cow position:
               
chr3:79220574-79221024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
17, 97
               

               
Conread position:
               
319-765
               

               
Cow position:
               
chr3:17695281-17694830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 112
               

               
Conread position:
               
319-766
               

               
Cow position:
               
chr3:53270551-53271007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 92
               

               
Conread position:
               
319-767
               

               
Cow position:
               
chr3:5365411-5365839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 100
               

               
Conread position:
               
319-767
               

               
Cow position:
               
chr3:68647885-68648351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 215
               

               
Conread position:
               
319-767
               

               
Cow position:
               
chr3:68708276-68707848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 22
               

               
Conread position:
               
319-767
               

               
Cow position:
               
chr3:71231131-71231572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 102
               

               
Conread position:
               
319-767
               

               
Cow position:
               
chr3:73394845-73395289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 13
               

               
Conread position:
               
319-787
               

               
Cow position:
               
chr3:17937114-17936653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 152
               

               
Conread position:
               
320-532
               

               
Cow position:
               
chr3:6853774-6853566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
20, 84
               

               
Conread position:
               
320-615
               

               
Cow position:
               
chr3:45523990-45524285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
16, 88
               

               
Conread position:
               
320-652
               

               
Cow position:
               
chr3:66610112-66609787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 82
               

               
Conread position:
               
320-696
               

               
Cow position:
               
chr3:75046144-75045776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
134, 60
               

               
Conread position:
               
320-751
               

               
Cow position:
               
chr3:70334977-70334534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 50
               

               
Conread position:
               
320-761
               

               
Cow position:
               
chr3:54945851-54946289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 211
               

               
Conread position:
               
320-767
               

               
Cow position:
               
chr3:15158767-15159203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 101
               

               
Conread position:
               
321-508
               

               
Cow position:
               
chr3:48530364-48530562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
22, 100
               

               
Conread position:
               
321-525
               

               
Cow position:
               
chr3:8716974-8717184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
15, 40
               

               
Conread position:
               
321-533
               

               
Cow position:
               
chr3:48811258-48811053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
16, 39
               

               
Conread position:
               
321-554
               

               
Cow position:
               
chr3:19198408-19198633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
15, 94
               

               
Conread position:
               
321-702
               

               
Cow position:
               
chr3:78946112-78945733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 51
               

               
Conread position:
               
321-767
               

               
Cow position:
               
chr3:70675947-70676405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
15, 120
               

               
Conread position:
               
322-512
               

               
Cow position:
               
chr3:2903562-2903379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
18, 99
               

               
Conread position:
               
322-702
               

               
Cow position:
               
chr3:70899628-70899996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 99
               

               
Conread position:
               
322-709
               

               
Cow position:
               
chr3:55836100-55835709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 271
               

               
Conread position:
               
325-570
               

               
Cow position:
               
chr3:35283366-35283115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 209
               

               
Conread position:
               
325-586
               

               
Cow position:
               
chr3:84000343-84000603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
15, 96
               

               
Conread position:
               
325-648
               

               
Cow position:
               
chr3:31047211-31046899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
14, 31
               

               
Conread position:
               
325-684
               

               
Cow position:
               
chr3:10347085-10347442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 97
               

               
Conread position:
               
325-762
               

               
Cow position:
               
chr3:13302125-13301680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 211
               

               
Conread position:
               
325-765
               

               
Cow position:
               
chr3:31419432-31419867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
11, 90
               

               
Conread position:
               
325-765
               

               
Cow position:
               
chr3:51578590-51578152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 88
               

               
Conread position:
               
325-767
               

               
Cow position:
               
chr3:61225004-61224575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 71
               

               
Conread position:
               
325-767
               

               
Cow position:
               
chr3:71246768-71247188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
15, 64
               

               
Conread position:
               
326-576
               

               
Cow position:
               
chr3:52650797-52650548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
98, 14
               

               
Conread position:
               
327-627
               

               
Cow position:
               
chr3:21341231-21340931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 49
               

               
Conread position:
               
327-702
               

               
Cow position:
               
chr3:22716548-22716192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
9, 70
               

               
Conread position:
               
329-512
               

               
Cow position:
               
chr3:55970960-55971145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
10, 99
               

               
Conread position:
               
329-533
               

               
Cow position:
               
chr3:81401569-81401367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
18, 12
               

               
Conread position:
               
329-641
               

               
Cow position:
               
chr3:15655417-15655102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
11, 188
               

               
Conread position:
               
329-739
               

               
Cow position:
               
chr3:72390816-72391234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 96
               

               
Conread position:
               
329-763
               

               
Cow position:
               
chr3:57754749-57754305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 193
               

               
Conread position:
               
329-764
               

               
Cow position:
               
chr3:60597283-60597708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 61
               

               
Conread position:
               
330-711
               

               
Cow position:
               
chr3:73460715-73461083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 95
               

               
Conread position:
               
332-483
               

               
Cow position:
               
chr3:12670949-12670806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
332-689
               

               
Cow position:
               
chr3:26960853-26960495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
92, 34
               

               
Conread position:
               
332-767
               

               
Cow position:
               
chr3:59473852-59474294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 173
               

               
Conread position:
               
333-767
               

               
Cow position:
               
chr3:50614380-50614797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
148, 89
               

               
Conread position:
               
334-764
               

               
Cow position:
               
chr3:8060873-8061291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 67
               

               
Conread position:
               
334-765
               

               
Cow position:
               
chr3:3556286-3556720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
63, 18
               

               
Conread position:
               
335-509
               

               
Cow position:
               
chr3:61467348-61467523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
89, 155
               

               
Conread position:
               
335-512
               

               
Cow position:
               
chr3:14625645-14625472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
33, 71
               

               
Conread position:
               
335-530
               

               
Cow position:
               
chr3:18557927-18558108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
133, 32
               

               
Conread position:
               
335-551
               

               
Cow position:
               
chr3:45307677-45307891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
89, 125
               

               
Conread position:
               
335-564
               

               
Cow position:
               
chr3:8604271-8604043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
89, 68
               

               
Conread position:
               
335-581
               

               
Cow position:
               
chr3:28692687-28692444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
137, 67
               

               
Conread position:
               
335-582
               

               
Cow position:
               
chr3:4087423-4087173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
120, 78
               

               
Conread position:
               
335-593
               

               
Cow position:
               
chr3:73590255-73589997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
89, 23
               

               
Conread position:
               
335-640
               

               
Cow position:
               
chr3:22820312-22820614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
135, 65
               

               
Conread position:
               
335-682
               

               
Cow position:
               
chr3:45647882-45648216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
135, 76
               

               
Conread position:
               
335-701
               

               
Cow position:
               
chr3:17935180-17934836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
133, 67
               

               
Conread position:
               
335-734
               

               
Cow position:
               
chr3:61143836-61144232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
116, 91
               

               
Conread position:
               
335-766
               

               
Cow position:
               
chr3:52607926-52608354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 164
               

               
Conread position:
               
335-766
               

               
Cow position:
               
chr3:71237900-71238322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 35
               

               
Conread position:
               
335-766
               

               
Cow position:
               
chr3:82020101-82019669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 156
               

               
Conread position:
               
335-767
               

               
Cow position:
               
chr3:2506738-2506302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 203
               

               
Conread position:
               
335-767
               

               
Cow position:
               
chr3:33253138-33252718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 84
               

               
Conread position:
               
335-767
               

               
Cow position:
               
chr3:48362826-48363243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 33
               

               
Conread position:
               
335-767
               

               
Cow position:
               
chr3:75080509-75080926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 158
               

               
Conread position:
               
336-529
               

               
Cow position:
               
chr3:23269846-23270035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
127, 65
               

               
Conread position:
               
336-767
               

               
Cow position:
               
chr3:18686660-18687075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 64
               

               
Conread position:
               
337-523
               

               
Cow position:
               
chr3:23092238-23092048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
337-533
               

               
Cow position:
               
chr3:48578586-48578771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
337-764
               

               
Cow position:
               
chr3:26970570-26970982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 67
               

               
Conread position:
               
338-564
               

               
Cow position:
               
chr3:41328201-41328418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
125, 72
               

               
Conread position:
               
339-677
               

               
Cow position:
               
chr3:11711700-11712046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 31
               

               
Conread position:
               
341-765
               

               
Cow position:
               
chr3:5045061-5044638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
83, 192
               

               
Conread position:
               
342-699
               

               
Cow position:
               
chr3:15752878-15752533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 52
               

               
Conread position:
               
343-654
               

               
Cow position:
               
chr3:74878838-74878530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
112, 23
               

               
Conread position:
               
343-767
               

               
Cow position:
               
chr3:80740323-80740727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
189, 68
               

               
Conread position:
               
344-512
               

               
Cow position:
               
chr3:49787158-49787334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
344-694
               

               
Cow position:
               
chr3:58767031-58767361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
198, 62
               

               
Conread position:
               
344-765
               

               
Cow position:
               
chr3:55947327-55947771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
80, 181
               

               
Conread position:
               
344-767
               

               
Cow position:
               
chr3:43233255-43233677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 181
               

               
Conread position:
               
344-767
               

               
Cow position:
               
chr3:44932260-44932686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 248
               

               
Conread position:
               
346-715
               

               
Cow position:
               
chr3:115961-116306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
297, 20
               

               
Conread position:
               
347-548
               

               
Cow position:
               
chr3:30055691-30055491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
108, 56
               

               
Conread position:
               
348-580
               

               
Cow position:
               
chr3:35074437-35074669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
76, 39
               

               
Conread position:
               
350-506
               

               
Cow position:
               
chr3:78067379-78067220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
72, 8
               

               
Conread position:
               
350-767
               

               
Cow position:
               
chr3:12705801-12705373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 250
               

               
Conread position:
               
352-628
               

               
Cow position:
               
chr3:83201768-83201493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 162
               

               
Conread position:
               
352-765
               

               
Cow position:
               
chr3:39661690-39661282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
108, 51
               

               
Conread position:
               
353-767
               

               
Cow position:
               
chr3:22232882-22232494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 41
               

               
Conread position:
               
354-509
               

               
Cow position:
               
chr3:4861451-4861603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
116, 65
               

               
Conread position:
               
354-653
               

               
Cow position:
               
chr3:34937602-34937902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
70, 59
               

               
Conread position:
               
355-767
               

               
Cow position:
               
chr3:17134102-17134505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
106, 69
               

               
Conread position:
               
357-702
               

               
Cow position:
               
chr3:17447843-17447509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 62
               

               
Conread position:
               
357-767
               

               
Cow position:
               
chr3:188624-189049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
61, 71
               

               
Conread position:
               
360-586
               

               
Cow position:
               
chr3:55106675-55106449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
64, 174
               

               
Conread position:
               
360-767
               

               
Cow position:
               
chr3:67930410-67929996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
6, 37
               

               
Conread position:
               
360-767
               

               
Cow position:
               
chr3:68156498-68156901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 75
               

               
Conread position:
               
361-764
               

               
Cow position:
               
chr3:78092740-78092340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 9
               

               
Conread position:
               
364-641
               

               
Cow position:
               
chr3:56523659-56523402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
45, 13
               

               
Conread position:
               
364-681
               

               
Cow position:
               
chr3:15192336-15192665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
88, 55
               

               
Conread position:
               
365-682
               

               
Cow position:
               
chr3:15506220-15506534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 140
               

               
Conread position:
               
367-639
               

               
Cow position:
               
chr3:56301573-56301316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
57, 156
               

               
Conread position:
               
367-741
               

               
Cow position:
               
chr3:74134480-74134855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
57, 36
               

               
Conread position:
               
368-767
               

               
Cow position:
               
chr3:74754105-74754489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 26
               

               
Conread position:
               
369-697
               

               
Cow position:
               
chr3:60265459-60265153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 44
               

               
Conread position:
               
370-764
               

               
Cow position:
               
chr3:2198660-2199035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
100, 57
               

               
Conread position:
               
370-764
               

               
Cow position:
               
chr3:83215031-83215440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
55, 33
               

               
Conread position:
               
372-586
               

               
Cow position:
               
chr3:15859891-15859676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
374-765
               

               
Cow position:
               
chr3:67698061-67698451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
96, 53
               

               
Conread position:
               
375-743
               

               
Cow position:
               
chr3:25944860-25945245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
52, 224
               

               
Conread position:
               
375-764
               

               
Cow position:
               
chr3:46006248-46005844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
49, 222
               

               
Conread position:
               
376-523
               

               
Cow position:
               
chr3:35005561-35005708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
47, 58
               

               
Conread position:
               
376-767
               

               
Cow position:
               
chr3:23105582-23105191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 27
               

               
Conread position:
               
377-504
               

               
Cow position:
               
chr3:5082857-5082727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
377-641
               

               
Cow position:
               
chr3:78896433-78896691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
46, 19
               

               
Conread position:
               
377-767
               

               
Cow position:
               
chr3:76713537-76713138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
89, 47
               

               
Conread position:
               
378-586
               

               
Cow position:
               
chr3:25059859-25060070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
46, 168
               

               
Conread position:
               
379-533
               

               
Cow position:
               
chr3:10896615-10896770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
385-763
               

               
Cow position:
               
chr3:7661643-7662027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
15, 8
               

               
Conread position:
               
386-651
               

               
Cow position:
               
chr3:27697189-27696923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
41, 148
               

               
Conread position:
               
387-699
               

               
Cow position:
               
chr3:57760293-57760599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
68, 32
               

               
Conread position:
               
387-765
               

               
Cow position:
               
chr3:55712220-55712603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
37, 211
               

               
Conread position:
               
389-767
               

               
Cow position:
               
chr3:67520379-67520002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
22, 78
               

               
Conread position:
               
390-670
               

               
Cow position:
               
chr3:7940758-7940483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
80, 28
               

               
Conread position:
               
394-696
               

               
Cow position:
               
chr3:49791011-49790710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
11, 36
               

               
Conread position:
               
394-767
               

               
Cow position:
               
chr3:38828564-38828925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
29, 129
               

               
Conread position:
               
397-627
               

               
Cow position:
               
chr3:70631819-70632051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
27, 117
               

               
Conread position:
               
398-624
               

               
Cow position:
               
chr3:77665974-77665743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
26, 101
               

               
Conread position:
               
401-756
               

               
Cow position:
               
chr3:74079834-74079475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 190
               

               
Conread position:
               
401-765
               

               
Cow position:
               
chr3:55319098-55318726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
23, 76
               

               
Conread position:
               
402-729
               

               
Cow position:
               
chr3:15751917-15751578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
7, 183
               

               
Conread position:
               
402-759
               

               
Cow position:
               
chr3:57273872-57274224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 116
               

               
Conread position:
               
402-767
               

               
Cow position:
               
chr3:38035786-38035414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
22, 130
               

               
Conread position:
               
403-696
               

               
Cow position:
               
chr3:63269032-63269323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
21, 43
               

               
Conread position:
               
403-697
               

               
Cow position:
               
chr3:30221993-30222291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
52, 189
               

               
Conread position:
               
406-766
               

               
Cow position:
               
chr3:59596995-59597346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
56, 22
               

               
Conread position:
               
406-767
               

               
Cow position:
               
chr3:76268170-76267799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
58, 32
               

               
Conread position:
               
407-578
               

               
Cow position:
               
chr3:27212173-27212346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
410-763
               

               
Cow position:
               
chr3:26739604-26739254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
49, 11
               

               
Conread position:
               
410-767
               

               
Cow position:
               
chr3:53318217-53318584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
14, 121
               

               
Conread position:
               
411-677
               

               
Cow position:
               
chr3:74502507-74502244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
12, 112
               

               
Conread position:
               
411-718
               

               
Cow position:
               
chr3:20678020-20677724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 119
               

               
Conread position:
               
411-765
               

               
Cow position:
               
chr3:19198802-19199159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
13, 48
               

               
Conread position:
               
411-767
               

               
Cow position:
               
chr3:75687624-75687263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
13, 120
               

               
Conread position:
               
413-767
               

               
Cow position:
               
chr3:24872534-24872866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
57, 19
               

               
Conread position:
               
413-767
               

               
Cow position:
               
chr3:75853514-75853161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
14, 116
               

               
Conread position:
               
415-682
               

               
Cow position:
               
chr3:34669909-34669647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
9, 127
               

               
Conread position:
               
415-729
               

               
Cow position:
               
chr3:26981883-26982194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
9, 112
               

               
Conread position:
               
415-767
               

               
Cow position:
               
chr3:55819567-55819923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
50, 183
               

               
Conread position:
               
417-702
               

               
Cow position:
               
chr3:26874412-26874697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
53, 22
               

               
Conread position:
               
417-766
               

               
Cow position:
               
chr3:76922842-76922500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 113
               

               
Conread position:
               
417-767
               

               
Cow position:
               
chr3:60264895-60264548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 79
               

               
Conread position:
               
417-767
               

               
Cow position:
               
chr3:70762302-70761949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 147
               

               
Conread position:
               
421-766
               

               
Cow position:
               
chr3:54506535-54506879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 47
               

               
Conread position:
               
421-767
               

               
Cow position:
               
chr3:19792718-19793071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
38, 250
               

               
Conread position:
               
421-767
               

               
Cow position:
               
chr3:36418640-36418313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 65
               

               
Conread position:
               
421-767
               

               
Cow position:
               
chr3:62046488-62046845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
41, 74
               

               
Conread position:
               
421-767
               

               
Cow position:
               
chr3:75107620-75107946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
222, 37
               

               
Conread position:
               
422-702
               

               
Cow position:
               
chr3:53508448-53508719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
5, 11
               

               
Conread position:
               
429-571
               

               
Cow position:
               
chr3:34294451-34294307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
39, 100
               

               
Conread position:
               
429-677
               

               
Cow position:
               
chr3:55109781-55109532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
28, 15
               

               
Conread position:
               
429-765
               

               
Cow position:
               
chr3:26489251-26488905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
31, 98
               

               
Conread position:
               
429-766
               

               
Cow position:
               
chr3:68616491-68616162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 60
               

               
Conread position:
               
431-709
               

               
Cow position:
               
chr3:59884237-59883957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
32, 160
               

               
Conread position:
               
432-761
               

               
Cow position:
               
chr3:12978780-12978447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
27, 110
               

               
Conread position:
               
433-767
               

               
Cow position:
               
chr3:58765239-58764912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
113, 95
               

               
Conread position:
               
435-699
               

               
Cow position:
               
chr3:74242835-74243093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
32, 60
               

               
Conread position:
               
436-765
               

               
Cow position:
               
chr3:59034874-59035215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
28, 97
               

               
Conread position:
               
437-765
               

               
Cow position:
               
chr3:15153534-15153860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
109, 31
               

               
Conread position:
               
437-766
               

               
Cow position:
               
chr3:77581950-77582279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
18, 101
               

               
Conread position:
               
438-767
               

               
Cow position:
               
chr3:19585704-19586038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 90
               

               
Conread position:
               
438-767
               

               
Cow position:
               
chr3:24468536-24468210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
25, 97
               

               
Conread position:
               
442-676
               

               
Cow position:
               
chr3:46541981-46541749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
20, 78
               

               
Conread position:
               
445-770
               

               
Cow position:
               
chr3:55177903-55177574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 149
               

               
Conread position:
               
446-753
               

               
Cow position:
               
chr3:79196610-79196923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 66
               

               
Conread position:
               
449-765
               

               
Cow position:
               
chr3:74584072-74584362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
10, 57
               

               
Conread position:
               
449-767
               

               
Cow position:
               
chr3:3883965-3883646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 142
               

               
Conread position:
               
454-763
               

               
Cow position:
               
chr3:71238332-71238646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
16, 81
               

               
Conread position:
               
454-767
               

               
Cow position:
               
chr3:15443869-15443552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
189, 94
               

               
Conread position:
               
454-767
               

               
Cow position:
               
chr3:76155846-76156160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 88
               

               
Conread position:
               
455-702
               

               
Cow position:
               
chr3:84175963-84175718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
106, 8
               

               
Conread position:
               
455-766
               

               
Cow position:
               
chr3:59040429-59040743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
51, 74
               

               
Conread position:
               
458-765
               

               
Cow position:
               
chr3:3656378-3656687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
181, 77
               

               
Conread position:
               
462-702
               

               
Cow position:
               
chr3:22509895-22510129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
108, 65
               

               
Conread position:
               
462-756
               

               
Cow position:
               
chr3:73820501-73820202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
181, 45
               

               
Conread position:
               
462-766
               

               
Cow position:
               
chr3:78093515-78093220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
178, 63
               

               
Conread position:
               
462-767
               

               
Cow position:
               
chr3:17235340-17235030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
128, 18
               

               
Conread position:
               
462-767
               

               
Cow position:
               
chr3:17331595-17331893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
72, 120
               

               
Conread position:
               
462-767
               

               
Cow position:
               
chr3:48900469-48900156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
94, 23
               

               
Conread position:
               
462-767
               

               
Cow position:
               
chr3:73237063-73237357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
76, 29
               

               
Conread position:
               
464-766
               

               
Cow position:
               
chr3:13380416-13380105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
82, 147
               

               
Conread position:
               
464-767
               

               
Cow position:
               
chr3:64135587-64135871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
78, 27
               

               
Conread position:
               
466-758
               

               
Cow position:
               
chr3:56678481-56678181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
97, 109
               

               
Conread position:
               
466-767
               

               
Cow position:
               
chr3:35056106-35055802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
105, 73
               

               
Conread position:
               
467-701
               

               
Cow position:
               
chr3:33693692-33693922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
49, 11
               

               
Conread position:
               
468-767
               

               
Cow position:
               
chr3:51402783-51403070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
175, 73
               

               
Conread position:
               
469-767
               

               
Cow position:
               
chr3:70334088-70333795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
94, 67
               

               
Conread position:
               
472-767
               

               
Cow position:
               
chr3:14194301-14194016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
68, 46
               

               
Conread position:
               
472-767
               

               
Cow position:
               
chr3:22221198-22221500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
85, 122
               

               
Conread position:
               
473-702
               

               
Cow position:
               
chr3:1785362-1785140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
167, 28
               

               
Conread position:
               
473-764
               

               
Cow position:
               
chr3:17058661-17058376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
92, 60
               

               
Conread position:
               
473-765
               

               
Cow position:
               
chr3:21015081-21014784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
36, 74
               

               
Conread position:
               
474-654
               

               
Cow position:
               
chr3:12670734-12670556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
5, 20
               

               
Conread position:
               
474-763
               

               
Cow position:
               
chr3:58134807-58134514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
169, 54
               

               
Conread position:
               
474-765
               

               
Cow position:
               
chr3:15951031-15950745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
166, 53
               

               
Conread position:
               
475-702
               

               
Cow position:
               
chr3:63177360-63177586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
58, 115
               

               
Conread position:
               
477-697
               

               
Cow position:
               
chr3:6520090-6519868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
30, 14
               

               
Conread position:
               
477-767
               

               
Cow position:
               
chr3:58318070-58317769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
68, 114
               

               
Conread position:
               
480-703
               

               
Cow position:
               
chr3:72504012-72503789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
108, 122
               

               
Conread position:
               
482-763
               

               
Cow position:
               
chr3:18059590-18059874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
82, 37
               

               
Conread position:
               
485-701
               

               
Cow position:
               
chr3:55983986-55984203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
56, 108
               

               
Conread position:
               
485-767
               

               
Cow position:
               
chr3:57704214-57704506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
50, 143
               

               
Conread position:
               
486-762
               

               
Cow position:
               
chr3:9116920-9117203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
154, 41
               

               
Conread position:
               
487-702
               

               
Cow position:
               
chr3:32409104-32409319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
153, 53
               

               
Conread position:
               
487-764
               

               
Cow position:
               
chr3:31361312-31361594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 7
               

               
Conread position:
               
488-765
               

               
Cow position:
               
chr3:22165523-22165243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 40
               

               
Conread position:
               
488-767
               

               
Cow position:
               
chr3:3316918-3316634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
155, 47
               

               
Conread position:
               
489-764
               

               
Cow position:
               
chr3:44625268-44625008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
191, 39
               

               
Conread position:
               
490-762
               

               
Cow position:
               
chr3:75238354-75238630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
153, 49
               

               
Conread position:
               
491-718
               

               
Cow position:
               
chr3:19626612-19626382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
59, 35
               

               
Conread position:
               
495-702
               

               
Cow position:
               
chr3:15172980-15173187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
8, 16
               

               
Conread position:
               
496-764
               

               
Cow position:
               
chr3:75608399-75608659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
46, 92
               

               
Conread position:
               
496-767
               

               
Cow position:
               
chr3:47753126-47753411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
146, 92
               

               
Conread position:
               
497-675
               

               
Cow position:
               
chr3:3471941-3472119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
54, 71
               

               
Conread position:
               
497-753
               

               
Cow position:
               
chr3:18607565-18607823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
59, 97
               

               
Conread position:
               
497-765
               

               
Cow position:
               
chr3:64196727-64196997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 91
               

               
Conread position:
               
499-766
               

               
Cow position:
               
chr3:49363020-49363280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
144, 19
               

               
Conread position:
               
504-767
               

               
Cow position:
               
chr3:69785716-69785446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
139, 24
               

               
Conread position:
               
504-767
               

               
Cow position:
               
chr3:71474498-71474233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
24, 83
               

               
Conread position:
               
505-702
               

               
Cow position:
               
chr3:44330527-44330329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
135, 51
               

               
Conread position:
               
505-767
               

               
Cow position:
               
chr3:48459421-48459155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
32, 83
               

               
Conread position:
               
511-763
               

               
Cow position:
               
chr3:10668962-10668709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
132, 17
               

               
Conread position:
               
511-767
               

               
Cow position:
               
chr3:19682609-19682880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
25, 78
               

               
Conread position:
               
512-699
               

               
Cow position:
               
chr3:3478338-3478152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
40, 14
               

               
Conread position:
               
512-764
               

               
Cow position:
               
chr3:54982163-54981920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
46, 16
               

               
Conread position:
               
525-767
               

               
Cow position:
               
chr3:31804839-31804596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
21, 141
               

               
Conread position:
               
528-766
               

               
Cow position:
               
chr3:10591585-10591340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
14, 62
               

               
Conread position:
               
538-755
               

               
Cow position:
               
chr3:39988293-39988090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
104, 37
               

               
Conread position:
               
538-765
               

               
Cow position:
               
chr3:48468115-48468348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
133, 49
               

               
Conread position:
               
540-767
               

               
Cow position:
               
chr3:23132225-23131994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
101, 48
               

               
Conread position:
               
540-767
               

               
Cow position:
               
chr3:76269836-76270062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
103, 48
               

               
Conread position:
               
541-682
               

               
Cow position:
               
chr3:41652321-41652462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
99, 47
               

               
Conread position:
               
541-682
               

               
Cow position:
               
chr3:51349768-51349909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
99, 47
               

               
Conread position:
               
541-718
               

               
Cow position:
               
chr3:3946983-3947157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
40, 44
               

               
Conread position:
               
541-763
               

               
Cow position:
               
chr3:18001143-18001356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
99, 47
               

               
Conread position:
               
541-767
               

               
Cow position:
               
chr3:9120790-9121016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
102, 46
               

               
Conread position:
               
542-702
               

               
Cow position:
               
chr3:82629262-82629421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
97, 49
               

               
Conread position:
               
542-767
               

               
Cow position:
               
chr3:33002332-33002559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
31, 47
               

               
Conread position:
               
542-767
               

               
Cow position:
               
chr3:75173634-75173426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
543-764
               

               
Cow position:
               
chr3:14546949-14547170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
125, 48
               

               
Conread position:
               
543-765
               

               
Cow position:
               
chr3:40213086-40212863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
100, 37
               

               
Conread position:
               
544-764
               

               
Cow position:
               
chr3:81234337-81234559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
46, 60
               

               
Conread position:
               
544-765
               

               
Cow position:
               
chr3:14770934-14770714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
99, 43
               

               
Conread position:
               
544-767
               

               
Cow position:
               
chr3:52845502-52845729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
45, 19
               

               
Conread position:
               
545-767
               

               
Cow position:
               
chr3:5305747-5305977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
98, 43
               

               
Conread position:
               
547-736
               

               
Cow position:
               
chr3:16505524-16505341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
93, 41
               

               
Conread position:
               
547-767
               

               
Cow position:
               
chr3:8349614-8349397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
43, 114
               

               
Conread position:
               
548-767
               

               
Cow position:
               
chr3:44961052-44960844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
42, 29
               

               
Conread position:
               
549-759
               

               
Cow position:
               
chr3:26603602-26603380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
41, 110
               

               
Conread position:
               
556-745
               

               
Cow position:
               
chr3:82123588-82123401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
17, 32
               

               
Conread position:
               
557-697
               

               
Cow position:
               
chr3:64648453-64648593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
86, 34
               

               
Conread position:
               
557-714
               

               
Cow position:
               
chr3:48478068-48477918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
560-764
               

               
Cow position:
               
chr3:41863588-41863793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
10, 31
               

               
Conread position:
               
560-764
               

               
Cow position:
               
chr3:52456882-52457080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
83, 31
               

               
Conread position:
               
560-767
               

               
Cow position:
               
chr3:11229401-11229196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
81, 30
               

               
Conread position:
               
565-748
               

               
Cow position:
               
chr3:35238982-35239166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
75, 23
               

               
Conread position:
               
565-764
               

               
Cow position:
               
chr3:59933340-59933551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
78, 23
               

               
Conread position:
               
565-769
               

               
Cow position:
               
chr3:20021238-20021444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
78, 23
               

               
Conread position:
               
569-767
               

               
Cow position:
               
chr3:75966808-75966608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
74, 22
               

               
Conread position:
               
572-739
               

               
Cow position:
               
chr3:19788854-19788685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
18, 25
               

               
Conread position:
               
572-767
               

               
Cow position:
               
chr3:67407390-67407193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
70, 16
               

               
Conread position:
               
574-767
               

               
Cow position:
               
chr3:15160498-15160691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
67, 17
               

               
Conread position:
               
574-768
               

               
Cow position:
               
chr3:31115292-31115103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
69, 17
               

               
Conread position:
               
575-767
               

               
Cow position:
               
chr3:73701483-73701672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
49, 13
               

               
Conread position:
               
577-767
               

               
Cow position:
               
chr3:58101660-58101849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
108, 13
               

               
Conread position:
               
586-767
               

               
Cow position:
               
chr3:19709099-19709279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
49, 74
               

               
Conread position:
               
588-767
               

               
Cow position:
               
chr3:41510567-41510752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
54, 73
               

               
Conread position:
               
593-755
               

               
Cow position:
               
chr3:17531742-17531574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
50, 67
               

               
Conread position:
               
597-767
               

               
Cow position:
               
chr3:23818491-23818661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
46, 55
               

               
Conread position:
               
598-764
               

               
Cow position:
               
chr3:81401096-81400935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
45, 61
               

               
Conread position:
               
598-766
               

               
Cow position:
               
chr3:56943925-56943757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
45, 62
               

               
Conread position:
               
599-765
               

               
Cow position:
               
chr3:18700109-18699936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
44, 61
               

               
Conread position:
               
599-767
               

               
Cow position:
               
chr3:59681902-59681733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
44, 61
               

               
Conread position:
               
601-767
               

               
Cow position:
               
chr3:22868716-22868542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
28, 61
               

               
Conread position:
               
601-767
               

               
Cow position:
               
chr3:43896056-43895889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
42, 59
               

               
Conread position:
               
601-767
               

               
Cow position:
               
chr3:49344697-49344866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
40, 55
               

               
Conread position:
               
601-767
               

               
Cow position:
               
chr3:74050698-74050532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
42, 59
               

               
Conread position:
               
601-782
               

               
Cow position:
               
chr3:26977538-26977726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
39, 61
               

               
Conread position:
               
602-757
               

               
Cow position:
               
chr3:51609181-51609020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
41, 61
               

               
Conread position:
               
602-763
               

               
Cow position:
               
chr3:3401552-3401711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
41, 55
               

               
Conread position:
               
602-767
               

               
Cow position:
               
chr3:23640348-23640513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
39, 58
               

               
Conread position:
               
602-767
               

               
Cow position:
               
chr3:24774658-24774816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
36, 55
               

               
Conread position:
               
602-767
               

               
Cow position:
               
chr3:70402649-70402812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
41, 29
               

               
Conread position:
               
602-767
               

               
Cow position:
               
chr3:76056280-76056114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
37, 58
               

               
Conread position:
               
602-767
               

               
Cow position:
               
chr3:78071786-78071618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
41, 58
               

               
Conread position:
               
603-767
               

               
Cow position:
               
chr3:5737757-5737918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
88, 37
               

               
Conread position:
               
603-767
               

               
Cow position:
               
chr3:8523149-8522980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
21, 56
               

               
Conread position:
               
603-767
               

               
Cow position:
               
chr3:64910090-64909921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
42, 57
               

               
Conread position:
               
603-767
               

               
Cow position:
               
chr3:68565827-68565986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
38, 53
               

               
Conread position:
               
604-767
               

               
Cow position:
               
chr3:26393293-26393125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
39, 56
               

               
Conread position:
               
604-767
               

               
Cow position:
               
chr3:61024016-61023847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
39, 56
               

               
Conread position:
               
605-765
               

               
Cow position:
               
chr3:11607830-11607989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
34, 54
               

               
Conread position:
               
606-767
               

               
Cow position:
               
chr3:77098814-77098650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
37, 54
               

               
Conread position:
               
608-764
               

               
Cow position:
               
chr3:40958116-40957957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
33, 52
               

               
Conread position:
               
609-756
               

               
Cow position:
               
chr3:10115310-10115458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
79, 49
               

               
Conread position:
               
610-767
               

               
Cow position:
               
chr3:82425066-82424907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
31, 57
               

               
Conread position:
               
612-767
               

               
Cow position:
               
chr3:2636964-2637119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
31, 48
               

               
Conread position:
               
620-767
               

               
Cow position:
               
chr3:22078098-22078252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
23, 40
               

               
Conread position:
               
623-767
               

               
Cow position:
               
chr3:61211431-61211292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
20, 65
               

               
Conread position:
               
623-767
               

               
Cow position:
               
chr3:75907937-75908085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
17, 38
               

               
Conread position:
               
624-767
               

               
Cow position:
               
chr3:59635339-59635477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
19, 36
               

               
Conread position:
               
631-753
               

               
Cow position:
               
chr3:25289878-25290003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
12, 29
               

               
Conread position:
               
631-767
               

               
Cow position:
               
chr3:24370435-24370565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
12, 29
               

               
Conread position:
               
642-767
               

               
Cow position:
               
chr3:41826286-41826162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
651-767
               

               
Cow position:
               
chr3:3887586-3887465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
654-767
               

               
Cow position:
               
chr3:17401436-17401548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
56, 32
               
Show alignments to all cow chromosomes.