Cow genome map
| Conread name: | Spl1-SPL01G050094 |
| Conread position: | 1-142 |
| Cow position: | chr11:1495391-1495253 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 110 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 32, 116 |
| Conread position: | 1-236 |
| Cow position: | chr11:23479241-23479473 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 154, 0 |
| Conread position: | 1-547 |
| Cow position: | chr11:37357985-37358535 (view UCSC Genome Browser custom track) |
| Alignm length: | 571 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 220 |
| Conread position: | 1-549 |
| Cow position: | chr11:28053917-28053393 (view UCSC Genome Browser custom track) |
| Alignm length: | 551 |
| Alignm identity: | 398 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 473, 90 |
| Conread position: | 1-549 |
| Cow position: | chr11:44156550-44156013 (view UCSC Genome Browser custom track) |
| Alignm length: | 556 |
| Alignm identity: | 430 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 295, 154 |
| Conread position: | 1-627 |
| Cow position: | chr11:26124229-26123597 (view UCSC Genome Browser custom track) |
| Alignm length: | 638 |
| Alignm identity: | 517 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 297, 44 |
| Conread position: | 1-687 |
| Cow position: | chr11:41169998-41169296 (view UCSC Genome Browser custom track) |
| Alignm length: | 704 |
| Alignm identity: | 556 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 279 |
| Conread position: | 1-692 |
| Cow position: | chr11:12357718-12356997 (view UCSC Genome Browser custom track) |
| Alignm length: | 722 |
| Alignm identity: | 555 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 1-692 |
| Cow position: | chr11:24394010-24394717 (view UCSC Genome Browser custom track) |
| Alignm length: | 711 |
| Alignm identity: | 552 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 295, 356 |
| Conread position: | 1-694 |
| Cow position: | chr11:44582638-44581936 (view UCSC Genome Browser custom track) |
| Alignm length: | 711 |
| Alignm identity: | 555 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 295, 194 |
| Conread position: | 1-694 |
| Cow position: | chr11:72310337-72309633 (view UCSC Genome Browser custom track) |
| Alignm length: | 711 |
| Alignm identity: | 547 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 61 |
| Conread position: | 1-694 |
| Cow position: | chr11:85393117-85392427 (view UCSC Genome Browser custom track) |
| Alignm length: | 711 |
| Alignm identity: | 532 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 297, 90 |
| Conread position: | 1-695 |
| Cow position: | chr11:1489449-1488764 (view UCSC Genome Browser custom track) |
| Alignm length: | 713 |
| Alignm identity: | 531 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 91 |
| Conread position: | 1-696 |
| Cow position: | chr11:17546861-17547566 (view UCSC Genome Browser custom track) |
| Alignm length: | 712 |
| Alignm identity: | 550 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 300, 40 |
| Conread position: | 1-696 |
| Cow position: | chr11:19063375-19062668 (view UCSC Genome Browser custom track) |
| Alignm length: | 714 |
| Alignm identity: | 546 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 300, 173 |
| Conread position: | 1-696 |
| Cow position: | chr11:32452524-32453240 (view UCSC Genome Browser custom track) |
| Alignm length: | 717 |
| Alignm identity: | 541 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 303, 0 |
| Conread position: | 1-696 |
| Cow position: | chr11:67451191-67451901 (view UCSC Genome Browser custom track) |
| Alignm length: | 715 |
| Alignm identity: | 543 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 62 |
| Conread position: | 1-696 |
| Cow position: | chr11:67845868-67845163 (view UCSC Genome Browser custom track) |
| Alignm length: | 714 |
| Alignm identity: | 537 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 300, 40 |
| Conread position: | 1-696 |
| Cow position: | chr11:73133982-73134711 (view UCSC Genome Browser custom track) |
| Alignm length: | 730 |
| Alignm identity: | 551 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 2-697 |
| Cow position: | chr11:47759585-47758869 (view UCSC Genome Browser custom track) |
| Alignm length: | 727 |
| Alignm identity: | 565 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 159 |
| Conread position: | 3-694 |
| Cow position: | chr11:23880728-23881428 (view UCSC Genome Browser custom track) |
| Alignm length: | 709 |
| Alignm identity: | 551 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 122 |
| Conread position: | 10-694 |
| Cow position: | chr11:11988842-11989536 (view UCSC Genome Browser custom track) |
| Alignm length: | 701 |
| Alignm identity: | 550 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 281, 24 |
| Conread position: | 15-394 |
| Cow position: | chr11:29232303-29231927 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 269 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 180, 106 |
| Conread position: | 23-696 |
| Cow position: | chr11:28229047-28228359 (view UCSC Genome Browser custom track) |
| Alignm length: | 693 |
| Alignm identity: | 531 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 278, 323 |
| Conread position: | 26-701 |
| Cow position: | chr11:26070317-26069628 (view UCSC Genome Browser custom track) |
| Alignm length: | 706 |
| Alignm identity: | 549 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 87 |
| Conread position: | 28-694 |
| Cow position: | chr11:53431326-53430628 (view UCSC Genome Browser custom track) |
| Alignm length: | 705 |
| Alignm identity: | 530 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 211, 362 |
| Conread position: | 28-696 |
| Cow position: | chr11:20505953-20506661 (view UCSC Genome Browser custom track) |
| Alignm length: | 716 |
| Alignm identity: | 517 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 263, 127 |
| Conread position: | 28-696 |
| Cow position: | chr11:57627329-57626643 (view UCSC Genome Browser custom track) |
| Alignm length: | 687 |
| Alignm identity: | 523 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 273, 0 |
| Conread position: | 32-696 |
| Cow position: | chr11:87142316-87142990 (view UCSC Genome Browser custom track) |
| Alignm length: | 689 |
| Alignm identity: | 522 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 24 |
| Conread position: | 36-696 |
| Cow position: | chr11:40775266-40774619 (view UCSC Genome Browser custom track) |
| Alignm length: | 670 |
| Alignm identity: | 524 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 125 |
| Conread position: | 44-688 |
| Cow position: | chr11:30123098-30122452 (view UCSC Genome Browser custom track) |
| Alignm length: | 657 |
| Alignm identity: | 510 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 430, 38 |
| Conread position: | 127-696 |
| Cow position: | chr11:26074141-26073561 (view UCSC Genome Browser custom track) |
| Alignm length: | 588 |
| Alignm identity: | 454 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 170, 24 |
| Conread position: | 165-696 |
| Cow position: | chr11:67154549-67155086 (view UCSC Genome Browser custom track) |
| Alignm length: | 550 |
| Alignm identity: | 420 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 69 |
| Conread position: | 240-694 |
| Cow position: | chr11:7117357-7117818 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 127 |
| Conread position: | 265-696 |
| Cow position: | chr11:23249513-23249061 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 36 |
| Conread position: | 324-696 |
| Cow position: | chr11:47738517-47738139 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 6 |
| Conread position: | 352-696 |
| Cow position: | chr11:50836618-50836259 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 355-694 |
| Cow position: | chr11:17119291-17118936 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 447-696 |
| Cow position: | chr11:15986396-15986651 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 100 |
| Conread position: | 452-692 |
| Cow position: | chr11:41234164-41234419 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 457-696 |
| Cow position: | chr11:31863241-31863495 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 192 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 532-696 |
| Cow position: | chr11:11578514-11578333 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 138 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 33, 169 |
| Conread position: | 561-696 |
| Cow position: | chr11:40405790-40405644 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 115 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 51, 0 |
Show alignments to all cow chromosomes.