Cow genome map
| Conread name: | Spl1-SPL01G050094 |
| Conread position: | 1-114 |
| Cow position: | chr22:31314332-31314444 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 92 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 1-256 |
| Cow position: | chr22:37133637-37133894 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 80 |
| Conread position: | 1-266 |
| Cow position: | chr22:37140883-37141150 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 214 |
| Conread position: | 1-625 |
| Cow position: | chr22:36184744-36185368 (view UCSC Genome Browser custom track) |
| Alignm length: | 631 |
| Alignm identity: | 488 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 92 |
| Conread position: | 1-693 |
| Cow position: | chr22:42992161-42992862 (view UCSC Genome Browser custom track) |
| Alignm length: | 706 |
| Alignm identity: | 561 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 42 |
| Conread position: | 1-694 |
| Cow position: | chr22:559724-559015 (view UCSC Genome Browser custom track) |
| Alignm length: | 712 |
| Alignm identity: | 560 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 461 |
| Conread position: | 1-694 |
| Cow position: | chr22:6332695-6333402 (view UCSC Genome Browser custom track) |
| Alignm length: | 711 |
| Alignm identity: | 553 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 287, 470 |
| Conread position: | 1-694 |
| Cow position: | chr22:34169324-34170029 (view UCSC Genome Browser custom track) |
| Alignm length: | 709 |
| Alignm identity: | 567 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 287, 408 |
| Conread position: | 1-694 |
| Cow position: | chr22:36860550-36859855 (view UCSC Genome Browser custom track) |
| Alignm length: | 711 |
| Alignm identity: | 560 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 296, 40 |
| Conread position: | 1-696 |
| Cow position: | chr22:538086-538804 (view UCSC Genome Browser custom track) |
| Alignm length: | 725 |
| Alignm identity: | 545 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 101 |
| Conread position: | 1-696 |
| Cow position: | chr22:1268772-1268063 (view UCSC Genome Browser custom track) |
| Alignm length: | 721 |
| Alignm identity: | 546 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 24 |
| Conread position: | 1-696 |
| Cow position: | chr22:1281746-1281039 (view UCSC Genome Browser custom track) |
| Alignm length: | 726 |
| Alignm identity: | 550 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 215 |
| Conread position: | 1-696 |
| Cow position: | chr22:3803173-3803876 (view UCSC Genome Browser custom track) |
| Alignm length: | 717 |
| Alignm identity: | 551 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 305, 42 |
| Conread position: | 1-696 |
| Cow position: | chr22:8737344-8736654 (view UCSC Genome Browser custom track) |
| Alignm length: | 720 |
| Alignm identity: | 541 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 40 |
| Conread position: | 1-696 |
| Cow position: | chr22:11804069-11803357 (view UCSC Genome Browser custom track) |
| Alignm length: | 715 |
| Alignm identity: | 544 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 487 |
| Conread position: | 1-696 |
| Cow position: | chr22:20239856-20239143 (view UCSC Genome Browser custom track) |
| Alignm length: | 716 |
| Alignm identity: | 535 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 300, 526 |
| Conread position: | 14-696 |
| Cow position: | chr22:326179-325481 (view UCSC Genome Browser custom track) |
| Alignm length: | 711 |
| Alignm identity: | 530 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 292, 102 |
| Conread position: | 25-696 |
| Cow position: | chr22:1879812-1880500 (view UCSC Genome Browser custom track) |
| Alignm length: | 692 |
| Alignm identity: | 524 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 189 |
| Conread position: | 47-696 |
| Cow position: | chr22:21035357-21034694 (view UCSC Genome Browser custom track) |
| Alignm length: | 665 |
| Alignm identity: | 533 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 427, 68 |
| Conread position: | 130-690 |
| Cow position: | chr22:15852530-15853112 (view UCSC Genome Browser custom track) |
| Alignm length: | 585 |
| Alignm identity: | 442 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 238 |
| Conread position: | 164-696 |
| Cow position: | chr22:44368324-44367786 (view UCSC Genome Browser custom track) |
| Alignm length: | 549 |
| Alignm identity: | 418 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 148, 105 |
| Conread position: | 205-687 |
| Cow position: | chr22:46614492-46614987 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 62 |
| Conread position: | 211-696 |
| Cow position: | chr22:35670470-35669975 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 136 |
| Conread position: | 263-696 |
| Cow position: | chr22:29012018-29011579 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 71 |
| Conread position: | 303-696 |
| Cow position: | chr22:30677431-30677018 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 304-696 |
| Cow position: | chr22:44478049-44478414 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 259, 29 |
| Conread position: | 313-687 |
| Cow position: | chr22:13766664-13767045 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 161, 137 |
| Conread position: | 343-696 |
| Cow position: | chr22:11807415-11807052 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 392-692 |
| Cow position: | chr22:15310563-15310266 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 212 |
| Conread position: | 398-693 |
| Cow position: | chr22:45014734-45015037 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 210, 68 |
| Conread position: | 409-689 |
| Cow position: | chr22:1323554-1323839 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 12 |
| Conread position: | 418-696 |
| Cow position: | chr22:23752303-23752013 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 84 |
| Conread position: | 445-696 |
| Cow position: | chr22:32283252-32282986 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 454-696 |
| Cow position: | chr22:34601034-34601283 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 89 |
| Conread position: | 467-708 |
| Cow position: | chr22:15955574-15955320 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 21, 64 |
| Conread position: | 479-708 |
| Cow position: | chr22:37141985-37142218 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 178 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 86, 60 |
| Conread position: | 509-696 |
| Cow position: | chr22:29499036-29499236 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 541-729 |
| Cow position: | chr22:40371573-40371767 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 152 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 21, 15 |
| Conread position: | 542-696 |
| Cow position: | chr22:37135292-37135457 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 25, 147 |
| Conread position: | 546-696 |
| Cow position: | chr22:8880630-8880793 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 555-696 |
| Cow position: | chr22:21336499-21336650 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 56, 6 |
| Conread position: | 561-696 |
| Cow position: | chr22:29352923-29353069 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 50, 0 |
Show alignments to all cow chromosomes.