Cow genome map
| Conread name: | Spl1-SPL01G050094 |
| Conread position: | 1-175 |
| Cow position: | chr28:1217124-1216947 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 42, 165 |
| Conread position: | 1-176 |
| Cow position: | chr28:5113264-5113090 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 1-359 |
| Cow position: | chr28:17251414-17251056 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 224 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 192, 87 |
| Conread position: | 1-687 |
| Cow position: | chr28:7003028-7003728 (view UCSC Genome Browser custom track) |
| Alignm length: | 702 |
| Alignm identity: | 545 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 185 |
| Conread position: | 1-692 |
| Cow position: | chr28:14704355-14703646 (view UCSC Genome Browser custom track) |
| Alignm length: | 713 |
| Alignm identity: | 546 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 298, 332 |
| Conread position: | 1-692 |
| Cow position: | chr28:32791345-32790662 (view UCSC Genome Browser custom track) |
| Alignm length: | 706 |
| Alignm identity: | 546 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 295, 73 |
| Conread position: | 1-694 |
| Cow position: | chr28:1166846-1166155 (view UCSC Genome Browser custom track) |
| Alignm length: | 708 |
| Alignm identity: | 545 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 562, 69 |
| Conread position: | 1-694 |
| Cow position: | chr28:1505899-1506605 (view UCSC Genome Browser custom track) |
| Alignm length: | 711 |
| Alignm identity: | 559 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 287, 358 |
| Conread position: | 1-694 |
| Cow position: | chr28:5750675-5749964 (view UCSC Genome Browser custom track) |
| Alignm length: | 716 |
| Alignm identity: | 554 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 297, 427 |
| Conread position: | 1-694 |
| Cow position: | chr28:5938517-5939227 (view UCSC Genome Browser custom track) |
| Alignm length: | 714 |
| Alignm identity: | 550 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 161 |
| Conread position: | 1-694 |
| Cow position: | chr28:12151337-12152065 (view UCSC Genome Browser custom track) |
| Alignm length: | 732 |
| Alignm identity: | 512 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 286 |
| Conread position: | 1-694 |
| Cow position: | chr28:13461006-13461707 (view UCSC Genome Browser custom track) |
| Alignm length: | 716 |
| Alignm identity: | 552 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 122 |
| Conread position: | 1-694 |
| Cow position: | chr28:17666274-17665588 (view UCSC Genome Browser custom track) |
| Alignm length: | 698 |
| Alignm identity: | 554 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 473, 305 |
| Conread position: | 1-696 |
| Cow position: | chr28:484564-483853 (view UCSC Genome Browser custom track) |
| Alignm length: | 714 |
| Alignm identity: | 539 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 340 |
| Conread position: | 1-696 |
| Cow position: | chr28:1954386-1955096 (view UCSC Genome Browser custom track) |
| Alignm length: | 714 |
| Alignm identity: | 544 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 260, 476 |
| Conread position: | 1-696 |
| Cow position: | chr28:5799330-5800033 (view UCSC Genome Browser custom track) |
| Alignm length: | 713 |
| Alignm identity: | 566 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 292, 75 |
| Conread position: | 1-696 |
| Cow position: | chr28:21360517-21361232 (view UCSC Genome Browser custom track) |
| Alignm length: | 731 |
| Alignm identity: | 566 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 154 |
| Conread position: | 1-696 |
| Cow position: | chr28:24589886-24590597 (view UCSC Genome Browser custom track) |
| Alignm length: | 716 |
| Alignm identity: | 546 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 257 |
| Conread position: | 1-696 |
| Cow position: | chr28:24668644-24669338 (view UCSC Genome Browser custom track) |
| Alignm length: | 710 |
| Alignm identity: | 545 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 475, 40 |
| Conread position: | 1-697 |
| Cow position: | chr28:26425223-26424519 (view UCSC Genome Browser custom track) |
| Alignm length: | 716 |
| Alignm identity: | 556 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 355 |
| Conread position: | 2-694 |
| Cow position: | chr28:3191222-3190513 (view UCSC Genome Browser custom track) |
| Alignm length: | 710 |
| Alignm identity: | 556 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 297, 0 |
| Conread position: | 2-694 |
| Cow position: | chr28:5765786-5766470 (view UCSC Genome Browser custom track) |
| Alignm length: | 711 |
| Alignm identity: | 538 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 297, 15 |
| Conread position: | 20-449 |
| Cow position: | chr28:10496478-10496064 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 67 |
| Conread position: | 200-694 |
| Cow position: | chr28:2117209-2117733 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 72 |
| Conread position: | 206-694 |
| Cow position: | chr28:10580644-10580133 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 172 |
| Conread position: | 249-696 |
| Cow position: | chr28:1459371-1459836 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 262-696 |
| Cow position: | chr28:6537521-6537069 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 368-696 |
| Cow position: | chr28:11504829-11504500 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 247 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 94, 12 |
| Conread position: | 422-696 |
| Cow position: | chr28:9288402-9288688 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 95 |
| Conread position: | 439-696 |
| Cow position: | chr28:25760940-25761205 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 68 |
| Conread position: | 454-696 |
| Cow position: | chr28:7059180-7058927 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 201 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 20, 58 |
| Conread position: | 456-696 |
| Cow position: | chr28:10496004-10495760 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 195 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 111, 58 |
| Conread position: | 458-694 |
| Cow position: | chr28:1765470-1765716 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 63, 161 |
| Conread position: | 540-696 |
| Cow position: | chr28:10067490-10067319 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 21, 0 |
Show alignments to all cow chromosomes.