Cow genome map
| Conread name: | Spl1-SPL01G050094 |
| Conread position: | 1-161 |
| Cow position: | chr3:18541229-18541069 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 122 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-687 |
| Cow position: | chr3:29579542-29580221 (view UCSC Genome Browser custom track) |
| Alignm length: | 710 |
| Alignm identity: | 524 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 287, 24 |
| Conread position: | 1-692 |
| Cow position: | chr3:56146229-56146921 (view UCSC Genome Browser custom track) |
| Alignm length: | 709 |
| Alignm identity: | 546 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 159, 10 |
| Conread position: | 1-694 |
| Cow position: | chr3:5994176-5993469 (view UCSC Genome Browser custom track) |
| Alignm length: | 718 |
| Alignm identity: | 535 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 57 |
| Conread position: | 1-694 |
| Cow position: | chr3:23289422-23288714 (view UCSC Genome Browser custom track) |
| Alignm length: | 716 |
| Alignm identity: | 546 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 162 |
| Conread position: | 1-694 |
| Cow position: | chr3:42448018-42448734 (view UCSC Genome Browser custom track) |
| Alignm length: | 718 |
| Alignm identity: | 548 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 261 |
| Conread position: | 1-694 |
| Cow position: | chr3:49136648-49135946 (view UCSC Genome Browser custom track) |
| Alignm length: | 717 |
| Alignm identity: | 564 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 287, 33 |
| Conread position: | 1-694 |
| Cow position: | chr3:66621095-66621815 (view UCSC Genome Browser custom track) |
| Alignm length: | 732 |
| Alignm identity: | 549 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 60 |
| Conread position: | 1-696 |
| Cow position: | chr3:1742243-1742952 (view UCSC Genome Browser custom track) |
| Alignm length: | 714 |
| Alignm identity: | 540 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 300, 117 |
| Conread position: | 1-696 |
| Cow position: | chr3:2918375-2919085 (view UCSC Genome Browser custom track) |
| Alignm length: | 714 |
| Alignm identity: | 537 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 249, 571 |
| Conread position: | 1-696 |
| Cow position: | chr3:3523934-3524632 (view UCSC Genome Browser custom track) |
| Alignm length: | 713 |
| Alignm identity: | 524 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 76 |
| Conread position: | 1-696 |
| Cow position: | chr3:4286997-4287707 (view UCSC Genome Browser custom track) |
| Alignm length: | 712 |
| Alignm identity: | 542 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 300, 565 |
| Conread position: | 1-696 |
| Cow position: | chr3:6686719-6687408 (view UCSC Genome Browser custom track) |
| Alignm length: | 712 |
| Alignm identity: | 551 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 124 |
| Conread position: | 1-696 |
| Cow position: | chr3:6783277-6783989 (view UCSC Genome Browser custom track) |
| Alignm length: | 716 |
| Alignm identity: | 550 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 18 |
| Conread position: | 1-696 |
| Cow position: | chr3:7157812-7157098 (view UCSC Genome Browser custom track) |
| Alignm length: | 715 |
| Alignm identity: | 541 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 300, 0 |
| Conread position: | 1-696 |
| Cow position: | chr3:18860325-18861038 (view UCSC Genome Browser custom track) |
| Alignm length: | 715 |
| Alignm identity: | 544 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 300, 345 |
| Conread position: | 1-696 |
| Cow position: | chr3:19800264-19799558 (view UCSC Genome Browser custom track) |
| Alignm length: | 714 |
| Alignm identity: | 542 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 300, 468 |
| Conread position: | 1-696 |
| Cow position: | chr3:34506435-34505732 (view UCSC Genome Browser custom track) |
| Alignm length: | 713 |
| Alignm identity: | 535 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 300, 372 |
| Conread position: | 1-696 |
| Cow position: | chr3:36863550-36862837 (view UCSC Genome Browser custom track) |
| Alignm length: | 714 |
| Alignm identity: | 533 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 300, 0 |
| Conread position: | 1-696 |
| Cow position: | chr3:37969954-37970667 (view UCSC Genome Browser custom track) |
| Alignm length: | 714 |
| Alignm identity: | 559 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 300, 0 |
| Conread position: | 2-692 |
| Cow position: | chr3:40824302-40825008 (view UCSC Genome Browser custom track) |
| Alignm length: | 709 |
| Alignm identity: | 569 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 294, 317 |
| Conread position: | 2-696 |
| Cow position: | chr3:64027213-64026517 (view UCSC Genome Browser custom track) |
| Alignm length: | 714 |
| Alignm identity: | 536 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 299, 39 |
| Conread position: | 10-696 |
| Cow position: | chr3:50916255-50916958 (view UCSC Genome Browser custom track) |
| Alignm length: | 709 |
| Alignm identity: | 527 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 456 |
| Conread position: | 15-650 |
| Cow position: | chr3:10095354-10095959 (view UCSC Genome Browser custom track) |
| Alignm length: | 638 |
| Alignm identity: | 408 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 491, 83 |
| Conread position: | 20-696 |
| Cow position: | chr3:15054741-15054084 (view UCSC Genome Browser custom track) |
| Alignm length: | 695 |
| Alignm identity: | 507 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 70 |
| Conread position: | 20-720 |
| Cow position: | chr3:2906840-2906112 (view UCSC Genome Browser custom track) |
| Alignm length: | 735 |
| Alignm identity: | 560 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 266, 42 |
| Conread position: | 23-696 |
| Cow position: | chr3:30331179-30330522 (view UCSC Genome Browser custom track) |
| Alignm length: | 683 |
| Alignm identity: | 513 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 194, 93 |
| Conread position: | 25-696 |
| Cow position: | chr3:2869725-2870409 (view UCSC Genome Browser custom track) |
| Alignm length: | 691 |
| Alignm identity: | 526 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 187, 130 |
| Conread position: | 28-689 |
| Cow position: | chr3:46503493-46504163 (view UCSC Genome Browser custom track) |
| Alignm length: | 679 |
| Alignm identity: | 505 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 271, 300 |
| Conread position: | 28-696 |
| Cow position: | chr3:19945181-19945870 (view UCSC Genome Browser custom track) |
| Alignm length: | 704 |
| Alignm identity: | 500 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 56 |
| Conread position: | 49-693 |
| Cow position: | chr3:40339189-40338530 (view UCSC Genome Browser custom track) |
| Alignm length: | 664 |
| Alignm identity: | 515 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 252, 106 |
| Conread position: | 67-695 |
| Cow position: | chr3:2854467-2853832 (view UCSC Genome Browser custom track) |
| Alignm length: | 644 |
| Alignm identity: | 494 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 119 |
| Conread position: | 72-692 |
| Cow position: | chr3:36877676-36877044 (view UCSC Genome Browser custom track) |
| Alignm length: | 643 |
| Alignm identity: | 494 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 219, 16 |
| Conread position: | 99-696 |
| Cow position: | chr3:56295194-56295806 (view UCSC Genome Browser custom track) |
| Alignm length: | 614 |
| Alignm identity: | 471 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 202, 305 |
| Conread position: | 126-692 |
| Cow position: | chr3:47087336-47087893 (view UCSC Genome Browser custom track) |
| Alignm length: | 578 |
| Alignm identity: | 434 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 32 |
| Conread position: | 169-696 |
| Cow position: | chr3:3840433-3839897 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 423 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 196 |
| Conread position: | 186-696 |
| Cow position: | chr3:51364693-51364168 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 419 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 289 |
| Conread position: | 230-696 |
| Cow position: | chr3:58948677-58949149 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 36 |
| Conread position: | 236-696 |
| Cow position: | chr3:44925204-44925683 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 249-694 |
| Cow position: | chr3:63241081-63240625 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 202, 58 |
| Conread position: | 268-696 |
| Cow position: | chr3:56327288-56327728 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 74 |
| Conread position: | 277-696 |
| Cow position: | chr3:18462648-18462225 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 104 |
| Conread position: | 307-694 |
| Cow position: | chr3:5952964-5952568 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 260, 137 |
| Conread position: | 341-696 |
| Cow position: | chr3:32200271-32200637 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 123 |
| Conread position: | 376-696 |
| Cow position: | chr3:16224171-16224506 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 90 |
| Conread position: | 457-692 |
| Cow position: | chr3:48229145-48228899 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 192 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 108, 60 |
| Conread position: | 470-696 |
| Cow position: | chr3:64651992-64652229 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 186 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 93, 69 |
| Conread position: | 489-696 |
| Cow position: | chr3:51857290-51857070 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 529-696 |
| Cow position: | chr3:19940371-19940550 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 145 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 556-687 |
| Cow position: | chr3:38868058-38868199 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 55, 5 |
| Conread position: | 561-694 |
| Cow position: | chr3:59863037-59863181 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 113 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 561-696 |
| Cow position: | chr3:58784681-58784535 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 115 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 50, 0 |
Show alignments to all cow chromosomes.