Cow genome map
| Conread name: | Spl1-SPL01G050094 |
| Conread position: | 1-640 |
| Cow position: | chr4:51042571-51041934 (view UCSC Genome Browser custom track) |
| Alignm length: | 652 |
| Alignm identity: | 486 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 115 |
| Conread position: | 1-687 |
| Cow position: | chr4:33072101-33071427 (view UCSC Genome Browser custom track) |
| Alignm length: | 705 |
| Alignm identity: | 536 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 287, 159 |
| Conread position: | 1-689 |
| Cow position: | chr4:36897092-36897793 (view UCSC Genome Browser custom track) |
| Alignm length: | 709 |
| Alignm identity: | 559 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 101 |
| Conread position: | 1-691 |
| Cow position: | chr4:6489644-6488948 (view UCSC Genome Browser custom track) |
| Alignm length: | 713 |
| Alignm identity: | 532 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 198, 56 |
| Conread position: | 1-692 |
| Cow position: | chr4:12588049-12588747 (view UCSC Genome Browser custom track) |
| Alignm length: | 707 |
| Alignm identity: | 554 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 304, 41 |
| Conread position: | 1-692 |
| Cow position: | chr4:17925245-17924541 (view UCSC Genome Browser custom track) |
| Alignm length: | 710 |
| Alignm identity: | 554 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 294, 97 |
| Conread position: | 1-694 |
| Cow position: | chr4:356628-357327 (view UCSC Genome Browser custom track) |
| Alignm length: | 711 |
| Alignm identity: | 545 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 100 |
| Conread position: | 1-694 |
| Cow position: | chr4:10882266-10882970 (view UCSC Genome Browser custom track) |
| Alignm length: | 712 |
| Alignm identity: | 550 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 203 |
| Conread position: | 1-694 |
| Cow position: | chr4:16639330-16640032 (view UCSC Genome Browser custom track) |
| Alignm length: | 710 |
| Alignm identity: | 556 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 298, 122 |
| Conread position: | 1-694 |
| Cow position: | chr4:43318923-43318214 (view UCSC Genome Browser custom track) |
| Alignm length: | 711 |
| Alignm identity: | 566 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 287, 358 |
| Conread position: | 1-694 |
| Cow position: | chr4:57984698-57985413 (view UCSC Genome Browser custom track) |
| Alignm length: | 718 |
| Alignm identity: | 554 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 221 |
| Conread position: | 1-696 |
| Cow position: | chr4:159877-160581 (view UCSC Genome Browser custom track) |
| Alignm length: | 711 |
| Alignm identity: | 541 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 299 |
| Conread position: | 1-696 |
| Cow position: | chr4:1929924-1929218 (view UCSC Genome Browser custom track) |
| Alignm length: | 714 |
| Alignm identity: | 551 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 300, 510 |
| Conread position: | 1-696 |
| Cow position: | chr4:5444117-5443401 (view UCSC Genome Browser custom track) |
| Alignm length: | 718 |
| Alignm identity: | 556 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 627 |
| Conread position: | 2-711 |
| Cow position: | chr4:34178519-34177813 (view UCSC Genome Browser custom track) |
| Alignm length: | 733 |
| Alignm identity: | 562 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 261 |
| Conread position: | 15-696 |
| Cow position: | chr4:99485-98794 (view UCSC Genome Browser custom track) |
| Alignm length: | 698 |
| Alignm identity: | 540 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 8 |
| Conread position: | 18-640 |
| Cow position: | chr4:37689-37089 (view UCSC Genome Browser custom track) |
| Alignm length: | 629 |
| Alignm identity: | 412 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 285, 68 |
| Conread position: | 28-724 |
| Cow position: | chr4:9847468-9846755 (view UCSC Genome Browser custom track) |
| Alignm length: | 719 |
| Alignm identity: | 566 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 88 |
| Conread position: | 34-696 |
| Cow position: | chr4:41955510-41956187 (view UCSC Genome Browser custom track) |
| Alignm length: | 682 |
| Alignm identity: | 521 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 138 |
| Conread position: | 43-696 |
| Cow position: | chr4:4416819-4417476 (view UCSC Genome Browser custom track) |
| Alignm length: | 670 |
| Alignm identity: | 520 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 258, 17 |
| Conread position: | 70-696 |
| Cow position: | chr4:42405391-42406039 (view UCSC Genome Browser custom track) |
| Alignm length: | 652 |
| Alignm identity: | 486 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 78 |
| Conread position: | 97-696 |
| Cow position: | chr4:6567199-6567803 (view UCSC Genome Browser custom track) |
| Alignm length: | 618 |
| Alignm identity: | 467 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 204, 163 |
| Conread position: | 104-696 |
| Cow position: | chr4:41959715-41960323 (view UCSC Genome Browser custom track) |
| Alignm length: | 612 |
| Alignm identity: | 477 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 70 |
| Conread position: | 105-696 |
| Cow position: | chr4:34183803-34183254 (view UCSC Genome Browser custom track) |
| Alignm length: | 601 |
| Alignm identity: | 447 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 46 |
| Conread position: | 205-696 |
| Cow position: | chr4:9355298-9355803 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 393 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 46 |
| Conread position: | 265-696 |
| Cow position: | chr4:65665419-65664988 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 349 |
| Conread position: | 291-696 |
| Cow position: | chr4:6865498-6865084 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 183, 130 |
| Conread position: | 293-696 |
| Cow position: | chr4:1952562-1952143 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 102 |
| Conread position: | 310-696 |
| Cow position: | chr4:14386844-14387246 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 0 |
| Conread position: | 310-696 |
| Cow position: | chr4:17502308-17501907 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 0 |
| Conread position: | 326-696 |
| Cow position: | chr4:604670-605054 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 148, 11 |
| Conread position: | 326-696 |
| Cow position: | chr4:20236357-20235973 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 13 |
| Conread position: | 345-698 |
| Cow position: | chr4:16060337-16060704 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 203 |
| Conread position: | 346-696 |
| Cow position: | chr4:30472271-30472637 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 458-686 |
| Cow position: | chr4:11109897-11109661 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 17, 37 |
| Conread position: | 473-690 |
| Cow position: | chr4:44742054-44741847 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 153 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 474-696 |
| Cow position: | chr4:17244296-17244530 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 185 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 91, 12 |
| Conread position: | 482-696 |
| Cow position: | chr4:827405-827632 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 180 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 496-696 |
| Cow position: | chr4:14139586-14139795 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 518-696 |
| Cow position: | chr4:20241752-20241944 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 142 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 541-693 |
| Cow position: | chr4:46666177-46666342 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 128 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 561-696 |
| Cow position: | chr4:43867472-43867618 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 52, 0 |
Show alignments to all cow chromosomes.