Cow genome map
| Conread name: | Spl1-SPL01G050094 |
| Conread position: | 1-681 |
| Cow position: | chr5:1341218-1340534 (view UCSC Genome Browser custom track) |
| Alignm length: | 701 |
| Alignm identity: | 532 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 192, 275 |
| Conread position: | 1-685 |
| Cow position: | chr5:45701127-45701818 (view UCSC Genome Browser custom track) |
| Alignm length: | 699 |
| Alignm identity: | 546 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 127 |
| Conread position: | 1-687 |
| Cow position: | chr5:48807924-48807215 (view UCSC Genome Browser custom track) |
| Alignm length: | 711 |
| Alignm identity: | 556 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 288, 410 |
| Conread position: | 1-689 |
| Cow position: | chr5:46737761-46737074 (view UCSC Genome Browser custom track) |
| Alignm length: | 704 |
| Alignm identity: | 539 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 473, 107 |
| Conread position: | 1-694 |
| Cow position: | chr5:3786734-3787462 (view UCSC Genome Browser custom track) |
| Alignm length: | 732 |
| Alignm identity: | 545 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 171 |
| Conread position: | 1-694 |
| Cow position: | chr5:4018380-4017689 (view UCSC Genome Browser custom track) |
| Alignm length: | 701 |
| Alignm identity: | 519 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 300, 247 |
| Conread position: | 1-694 |
| Cow position: | chr5:6154086-6153373 (view UCSC Genome Browser custom track) |
| Alignm length: | 716 |
| Alignm identity: | 565 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 297, 41 |
| Conread position: | 1-694 |
| Cow position: | chr5:23687077-23686396 (view UCSC Genome Browser custom track) |
| Alignm length: | 708 |
| Alignm identity: | 519 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 160 |
| Conread position: | 1-694 |
| Cow position: | chr5:55628806-55629508 (view UCSC Genome Browser custom track) |
| Alignm length: | 711 |
| Alignm identity: | 555 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 287, 471 |
| Conread position: | 1-694 |
| Cow position: | chr5:57481724-57481014 (view UCSC Genome Browser custom track) |
| Alignm length: | 712 |
| Alignm identity: | 555 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 287, 317 |
| Conread position: | 1-694 |
| Cow position: | chr5:64781201-64780489 (view UCSC Genome Browser custom track) |
| Alignm length: | 713 |
| Alignm identity: | 563 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 295, 0 |
| Conread position: | 1-696 |
| Cow position: | chr5:5104036-5104742 (view UCSC Genome Browser custom track) |
| Alignm length: | 713 |
| Alignm identity: | 540 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 340 |
| Conread position: | 1-696 |
| Cow position: | chr5:35300912-35301625 (view UCSC Genome Browser custom track) |
| Alignm length: | 715 |
| Alignm identity: | 551 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 377 |
| Conread position: | 1-696 |
| Cow position: | chr5:46005042-46004350 (view UCSC Genome Browser custom track) |
| Alignm length: | 714 |
| Alignm identity: | 534 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 232 |
| Conread position: | 1-696 |
| Cow position: | chr5:46664832-46665523 (view UCSC Genome Browser custom track) |
| Alignm length: | 712 |
| Alignm identity: | 517 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 295, 204 |
| Conread position: | 2-696 |
| Cow position: | chr5:12731895-12731188 (view UCSC Genome Browser custom track) |
| Alignm length: | 711 |
| Alignm identity: | 548 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 302 |
| Conread position: | 3-696 |
| Cow position: | chr5:18664613-18665292 (view UCSC Genome Browser custom track) |
| Alignm length: | 709 |
| Alignm identity: | 524 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 298, 38 |
| Conread position: | 12-696 |
| Cow position: | chr5:50870459-50871134 (view UCSC Genome Browser custom track) |
| Alignm length: | 703 |
| Alignm identity: | 517 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 289, 5 |
| Conread position: | 15-696 |
| Cow position: | chr5:31707393-31708090 (view UCSC Genome Browser custom track) |
| Alignm length: | 700 |
| Alignm identity: | 540 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 288, 39 |
| Conread position: | 19-694 |
| Cow position: | chr5:41554503-41553855 (view UCSC Genome Browser custom track) |
| Alignm length: | 682 |
| Alignm identity: | 461 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 329, 117 |
| Conread position: | 23-696 |
| Cow position: | chr5:59061473-59062163 (view UCSC Genome Browser custom track) |
| Alignm length: | 692 |
| Alignm identity: | 532 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 189, 601 |
| Conread position: | 26-694 |
| Cow position: | chr5:41960894-41960232 (view UCSC Genome Browser custom track) |
| Alignm length: | 677 |
| Alignm identity: | 537 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 265, 105 |
| Conread position: | 29-696 |
| Cow position: | chr5:988219-987541 (view UCSC Genome Browser custom track) |
| Alignm length: | 686 |
| Alignm identity: | 516 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 272, 194 |
| Conread position: | 31-696 |
| Cow position: | chr5:31100576-31099909 (view UCSC Genome Browser custom track) |
| Alignm length: | 685 |
| Alignm identity: | 526 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 23 |
| Conread position: | 152-696 |
| Cow position: | chr5:10813785-10813223 (view UCSC Genome Browser custom track) |
| Alignm length: | 563 |
| Alignm identity: | 446 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 0 |
| Conread position: | 198-687 |
| Cow position: | chr5:52434750-52435254 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 225 |
| Conread position: | 349-693 |
| Cow position: | chr5:4684640-4684281 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 205 |
| Conread position: | 401-697 |
| Cow position: | chr5:41376637-41376326 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 429-696 |
| Cow position: | chr5:40131358-40131075 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 436-692 |
| Cow position: | chr5:23831069-23830798 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 451-696 |
| Cow position: | chr5:51744549-51744802 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 202 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 23, 58 |
| Conread position: | 496-708 |
| Cow position: | chr5:12681738-12681511 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 183 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 509-696 |
| Cow position: | chr5:20108228-20108428 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 561-696 |
| Cow position: | chr5:12642054-12641906 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 118 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 50, 0 |
Show alignments to all cow chromosomes.