Cow genome map
| Conread name: | Spl1-SPL01G050094 |
| Conread position: | 1-138 |
| Cow position: | chr7:61578501-61578645 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 112 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 26, 124 |
| Conread position: | 1-394 |
| Cow position: | chr7:46901034-46900629 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 43 |
| Conread position: | 1-562 |
| Cow position: | chr7:1452692-1453251 (view UCSC Genome Browser custom track) |
| Alignm length: | 571 |
| Alignm identity: | 438 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 63 |
| Conread position: | 1-636 |
| Cow position: | chr7:25135908-25136532 (view UCSC Genome Browser custom track) |
| Alignm length: | 647 |
| Alignm identity: | 461 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 116 |
| Conread position: | 1-687 |
| Cow position: | chr7:13532857-13532167 (view UCSC Genome Browser custom track) |
| Alignm length: | 706 |
| Alignm identity: | 546 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 157 |
| Conread position: | 1-692 |
| Cow position: | chr7:526022-526697 (view UCSC Genome Browser custom track) |
| Alignm length: | 709 |
| Alignm identity: | 522 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 18 |
| Conread position: | 1-693 |
| Cow position: | chr7:29368979-29368290 (view UCSC Genome Browser custom track) |
| Alignm length: | 717 |
| Alignm identity: | 531 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 53 |
| Conread position: | 1-694 |
| Cow position: | chr7:10430377-10429672 (view UCSC Genome Browser custom track) |
| Alignm length: | 712 |
| Alignm identity: | 556 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 296, 361 |
| Conread position: | 1-694 |
| Cow position: | chr7:21986472-21987157 (view UCSC Genome Browser custom track) |
| Alignm length: | 711 |
| Alignm identity: | 552 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 296, 163 |
| Conread position: | 1-696 |
| Cow position: | chr7:5261878-5261167 (view UCSC Genome Browser custom track) |
| Alignm length: | 721 |
| Alignm identity: | 547 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 193, 367 |
| Conread position: | 1-696 |
| Cow position: | chr7:14214318-14213627 (view UCSC Genome Browser custom track) |
| Alignm length: | 707 |
| Alignm identity: | 536 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 563, 39 |
| Conread position: | 1-696 |
| Cow position: | chr7:20798396-20797698 (view UCSC Genome Browser custom track) |
| Alignm length: | 714 |
| Alignm identity: | 526 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 270, 298 |
| Conread position: | 1-696 |
| Cow position: | chr7:24934477-24933804 (view UCSC Genome Browser custom track) |
| Alignm length: | 713 |
| Alignm identity: | 536 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 105 |
| Conread position: | 1-696 |
| Cow position: | chr7:29471505-29472212 (view UCSC Genome Browser custom track) |
| Alignm length: | 724 |
| Alignm identity: | 549 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 73 |
| Conread position: | 1-696 |
| Cow position: | chr7:33332606-33333318 (view UCSC Genome Browser custom track) |
| Alignm length: | 720 |
| Alignm identity: | 567 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 192, 50 |
| Conread position: | 1-696 |
| Cow position: | chr7:42871187-42871897 (view UCSC Genome Browser custom track) |
| Alignm length: | 715 |
| Alignm identity: | 566 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 424 |
| Conread position: | 1-696 |
| Cow position: | chr7:52763324-52764040 (view UCSC Genome Browser custom track) |
| Alignm length: | 718 |
| Alignm identity: | 553 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 472 |
| Conread position: | 1-696 |
| Cow position: | chr7:59679893-59680602 (view UCSC Genome Browser custom track) |
| Alignm length: | 721 |
| Alignm identity: | 555 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 233 |
| Conread position: | 2-244 |
| Cow position: | chr7:39792817-39793058 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 2-694 |
| Cow position: | chr7:38397862-38398570 (view UCSC Genome Browser custom track) |
| Alignm length: | 710 |
| Alignm identity: | 547 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 241 |
| Conread position: | 3-696 |
| Cow position: | chr7:3156517-3157228 (view UCSC Genome Browser custom track) |
| Alignm length: | 722 |
| Alignm identity: | 544 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 38 |
| Conread position: | 3-696 |
| Cow position: | chr7:65811881-65812578 (view UCSC Genome Browser custom track) |
| Alignm length: | 713 |
| Alignm identity: | 528 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 300, 92 |
| Conread position: | 19-253 |
| Cow position: | chr7:54670990-54670754 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 181 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 149 |
| Conread position: | 28-696 |
| Cow position: | chr7:1609564-1608882 (view UCSC Genome Browser custom track) |
| Alignm length: | 690 |
| Alignm identity: | 523 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 144 |
| Conread position: | 28-696 |
| Cow position: | chr7:25440578-25441252 (view UCSC Genome Browser custom track) |
| Alignm length: | 687 |
| Alignm identity: | 515 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 273, 32 |
| Conread position: | 31-696 |
| Cow position: | chr7:63386809-63387489 (view UCSC Genome Browser custom track) |
| Alignm length: | 699 |
| Alignm identity: | 522 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 421 |
| Conread position: | 54-694 |
| Cow position: | chr7:24807375-24806732 (view UCSC Genome Browser custom track) |
| Alignm length: | 655 |
| Alignm identity: | 504 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 222 |
| Conread position: | 84-696 |
| Cow position: | chr7:20060612-20061241 (view UCSC Genome Browser custom track) |
| Alignm length: | 631 |
| Alignm identity: | 489 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 217, 515 |
| Conread position: | 118-696 |
| Cow position: | chr7:8336525-8337118 (view UCSC Genome Browser custom track) |
| Alignm length: | 594 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 356, 0 |
| Conread position: | 125-696 |
| Cow position: | chr7:49829154-49828581 (view UCSC Genome Browser custom track) |
| Alignm length: | 590 |
| Alignm identity: | 448 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 324, 32 |
| Conread position: | 136-770 |
| Cow position: | chr7:995938-996561 (view UCSC Genome Browser custom track) |
| Alignm length: | 646 |
| Alignm identity: | 497 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 429, 124 |
| Conread position: | 164-696 |
| Cow position: | chr7:64350694-64351242 (view UCSC Genome Browser custom track) |
| Alignm length: | 556 |
| Alignm identity: | 430 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 357 |
| Conread position: | 166-696 |
| Cow position: | chr7:62445936-62445396 (view UCSC Genome Browser custom track) |
| Alignm length: | 550 |
| Alignm identity: | 428 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 189 |
| Conread position: | 175-692 |
| Cow position: | chr7:27788170-27788705 (view UCSC Genome Browser custom track) |
| Alignm length: | 542 |
| Alignm identity: | 420 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 192, 38 |
| Conread position: | 192-694 |
| Cow position: | chr7:8143749-8143224 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 408 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 362 |
| Conread position: | 235-686 |
| Cow position: | chr7:59685091-59685558 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 88 |
| Conread position: | 236-687 |
| Cow position: | chr7:33405110-33404650 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 173, 232 |
| Conread position: | 291-696 |
| Cow position: | chr7:54581191-54581612 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 15 |
| Conread position: | 323-694 |
| Cow position: | chr7:61809375-61809761 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 0 |
| Conread position: | 334-696 |
| Cow position: | chr7:14528-14156 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 174 |
| Conread position: | 366-696 |
| Cow position: | chr7:11462728-11462384 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 8 |
| Conread position: | 376-694 |
| Cow position: | chr7:3126109-3126442 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 376-696 |
| Cow position: | chr7:23250040-23250375 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 385-696 |
| Cow position: | chr7:66070697-66070375 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 153 |
| Conread position: | 426-696 |
| Cow position: | chr7:42305360-42305103 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 206 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 138, 76 |
| Conread position: | 434-696 |
| Cow position: | chr7:33070932-33070657 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 82 |
| Conread position: | 437-696 |
| Cow position: | chr7:49730960-49731230 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 207 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 9, 66 |
| Conread position: | 473-696 |
| Cow position: | chr7:33785783-33786019 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 185 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 475-692 |
| Cow position: | chr7:60728933-60728706 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 90, 147 |
| Conread position: | 561-696 |
| Cow position: | chr7:40201561-40201707 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 116 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 563-694 |
| Cow position: | chr7:949153-949295 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 48, 0 |
Show alignments to all cow chromosomes.