Cow genome map
| Conread name: | Spl1-SPL01G050094 |
| Conread position: | 1-129 |
| Cow position: | chr9:2171932-2172066 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 104 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 1-493 |
| Cow position: | chr9:16176654-16177127 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 95 |
| Conread position: | 1-586 |
| Cow position: | chr9:59481912-59481327 (view UCSC Genome Browser custom track) |
| Alignm length: | 588 |
| Alignm identity: | 464 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 473, 297 |
| Conread position: | 1-663 |
| Cow position: | chr9:7061198-7060526 (view UCSC Genome Browser custom track) |
| Alignm length: | 677 |
| Alignm identity: | 520 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 161 |
| Conread position: | 1-687 |
| Cow position: | chr9:32969832-32970527 (view UCSC Genome Browser custom track) |
| Alignm length: | 704 |
| Alignm identity: | 543 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 250, 115 |
| Conread position: | 1-689 |
| Cow position: | chr9:30673251-30673966 (view UCSC Genome Browser custom track) |
| Alignm length: | 717 |
| Alignm identity: | 553 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 516 |
| Conread position: | 1-694 |
| Cow position: | chr9:17305092-17304384 (view UCSC Genome Browser custom track) |
| Alignm length: | 711 |
| Alignm identity: | 559 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 298, 179 |
| Conread position: | 1-694 |
| Cow position: | chr9:27783069-27783777 (view UCSC Genome Browser custom track) |
| Alignm length: | 715 |
| Alignm identity: | 551 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 426 |
| Conread position: | 1-694 |
| Cow position: | chr9:31808461-31809167 (view UCSC Genome Browser custom track) |
| Alignm length: | 716 |
| Alignm identity: | 553 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 290, 367 |
| Conread position: | 1-694 |
| Cow position: | chr9:37161928-37161222 (view UCSC Genome Browser custom track) |
| Alignm length: | 711 |
| Alignm identity: | 553 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 33 |
| Conread position: | 1-694 |
| Cow position: | chr9:51181299-51180588 (view UCSC Genome Browser custom track) |
| Alignm length: | 717 |
| Alignm identity: | 565 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 367 |
| Conread position: | 1-694 |
| Cow position: | chr9:59536982-59537693 (view UCSC Genome Browser custom track) |
| Alignm length: | 716 |
| Alignm identity: | 547 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 34 |
| Conread position: | 1-696 |
| Cow position: | chr9:779925-779228 (view UCSC Genome Browser custom track) |
| Alignm length: | 721 |
| Alignm identity: | 527 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 300, 115 |
| Conread position: | 1-696 |
| Cow position: | chr9:25903396-25904115 (view UCSC Genome Browser custom track) |
| Alignm length: | 731 |
| Alignm identity: | 529 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 131, 43 |
| Conread position: | 1-696 |
| Cow position: | chr9:27935264-27935974 (view UCSC Genome Browser custom track) |
| Alignm length: | 715 |
| Alignm identity: | 532 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 41 |
| Conread position: | 1-696 |
| Cow position: | chr9:31065602-31066312 (view UCSC Genome Browser custom track) |
| Alignm length: | 714 |
| Alignm identity: | 542 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 300, 291 |
| Conread position: | 1-696 |
| Cow position: | chr9:44819032-44819730 (view UCSC Genome Browser custom track) |
| Alignm length: | 715 |
| Alignm identity: | 544 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 289, 185 |
| Conread position: | 1-696 |
| Cow position: | chr9:46042332-46041658 (view UCSC Genome Browser custom track) |
| Alignm length: | 716 |
| Alignm identity: | 513 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 473, 11 |
| Conread position: | 1-696 |
| Cow position: | chr9:51211565-51212275 (view UCSC Genome Browser custom track) |
| Alignm length: | 714 |
| Alignm identity: | 540 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 300, 404 |
| Conread position: | 1-696 |
| Cow position: | chr9:64015757-64015078 (view UCSC Genome Browser custom track) |
| Alignm length: | 711 |
| Alignm identity: | 520 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 473, 154 |
| Conread position: | 2-687 |
| Cow position: | chr9:13474904-13474191 (view UCSC Genome Browser custom track) |
| Alignm length: | 724 |
| Alignm identity: | 562 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 87 |
| Conread position: | 2-696 |
| Cow position: | chr9:1251104-1250404 (view UCSC Genome Browser custom track) |
| Alignm length: | 714 |
| Alignm identity: | 519 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 117 |
| Conread position: | 2-697 |
| Cow position: | chr9:828249-827514 (view UCSC Genome Browser custom track) |
| Alignm length: | 741 |
| Alignm identity: | 566 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 531 |
| Conread position: | 4-696 |
| Cow position: | chr9:2212025-2212734 (view UCSC Genome Browser custom track) |
| Alignm length: | 711 |
| Alignm identity: | 531 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 113 |
| Conread position: | 13-696 |
| Cow position: | chr9:47042870-47043554 (view UCSC Genome Browser custom track) |
| Alignm length: | 703 |
| Alignm identity: | 530 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 288, 10 |
| Conread position: | 15-696 |
| Cow position: | chr9:24981021-24980355 (view UCSC Genome Browser custom track) |
| Alignm length: | 688 |
| Alignm identity: | 456 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 436, 42 |
| Conread position: | 20-696 |
| Cow position: | chr9:26083638-26082966 (view UCSC Genome Browser custom track) |
| Alignm length: | 701 |
| Alignm identity: | 519 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 455, 50 |
| Conread position: | 32-695 |
| Cow position: | chr9:651114-650432 (view UCSC Genome Browser custom track) |
| Alignm length: | 692 |
| Alignm identity: | 524 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 90 |
| Conread position: | 54-696 |
| Cow position: | chr9:20939260-20939904 (view UCSC Genome Browser custom track) |
| Alignm length: | 661 |
| Alignm identity: | 512 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 176, 16 |
| Conread position: | 104-696 |
| Cow position: | chr9:3309614-3310208 (view UCSC Genome Browser custom track) |
| Alignm length: | 607 |
| Alignm identity: | 471 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 361, 44 |
| Conread position: | 106-693 |
| Cow position: | chr9:44384249-44384854 (view UCSC Genome Browser custom track) |
| Alignm length: | 606 |
| Alignm identity: | 481 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 197, 0 |
| Conread position: | 159-696 |
| Cow position: | chr9:38677186-38677738 (view UCSC Genome Browser custom track) |
| Alignm length: | 554 |
| Alignm identity: | 438 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 317 |
| Conread position: | 234-696 |
| Cow position: | chr9:26567719-26568189 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 113 |
| Conread position: | 237-685 |
| Cow position: | chr9:22436090-22436535 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 236, 84 |
| Conread position: | 291-696 |
| Cow position: | chr9:50094063-50093643 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 183, 0 |
| Conread position: | 317-696 |
| Cow position: | chr9:8781708-8781334 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 20 |
| Conread position: | 450-696 |
| Cow position: | chr9:10976448-10976709 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 473-696 |
| Cow position: | chr9:28000879-28001118 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 93, 29 |
| Conread position: | 501-696 |
| Cow position: | chr9:30300843-30300635 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 160 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 523-696 |
| Cow position: | chr9:54681338-54681153 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 535-696 |
| Cow position: | chr9:56303032-56302858 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 547-696 |
| Cow position: | chr9:6709390-6709552 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 561-687 |
| Cow position: | chr9:29026475-29026342 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 561-696 |
| Cow position: | chr9:3804801-3804943 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 568-694 |
| Cow position: | chr9:47004186-47004323 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 111 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 43, 0 |
Show alignments to all cow chromosomes.