Cow genome map

Conread name: Spl1-SPL01G050094

Conread position: 1-170
Cow position: chrX:4797115-4797284 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 137
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 0, 0

Conread position: 1-563
Cow position: chrX:30057843-30058403 (view UCSC Genome Browser custom track)
Alignm length: 570
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 63

Conread position: 1-692
Cow position: chrX:3375115-3374412 (view UCSC Genome Browser custom track)
Alignm length: 708
Alignm identity: 536
Alignm E-value: 0
Alignm gaps (pig, cow): 338, 30

Conread position: 1-693
Cow position: chrX:5282978-5282286 (view UCSC Genome Browser custom track)
Alignm length: 708
Alignm identity: 520
Alignm E-value: 0
Alignm gaps (pig, cow): 300, 94

Conread position: 1-694
Cow position: chrX:321256-321964 (view UCSC Genome Browser custom track)
Alignm length: 720
Alignm identity: 533
Alignm E-value: 0
Alignm gaps (pig, cow): 343, 251

Conread position: 1-694
Cow position: chrX:18952890-18952178 (view UCSC Genome Browser custom track)
Alignm length: 718
Alignm identity: 553
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 40

Conread position: 1-694
Cow position: chrX:23277817-23278522 (view UCSC Genome Browser custom track)
Alignm length: 714
Alignm identity: 562
Alignm E-value: 0
Alignm gaps (pig, cow): 287, 159

Conread position: 1-694
Cow position: chrX:23455226-23454520 (view UCSC Genome Browser custom track)
Alignm length: 710
Alignm identity: 567
Alignm E-value: 0
Alignm gaps (pig, cow): 287, 79

Conread position: 1-694
Cow position: chrX:26528766-26529463 (view UCSC Genome Browser custom track)
Alignm length: 708
Alignm identity: 562
Alignm E-value: 0
Alignm gaps (pig, cow): 365, 122

Conread position: 1-696
Cow position: chrX:674414-673706 (view UCSC Genome Browser custom track)
Alignm length: 717
Alignm identity: 550
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 103

Conread position: 1-696
Cow position: chrX:6281968-6281282 (view UCSC Genome Browser custom track)
Alignm length: 718
Alignm identity: 536
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 265

Conread position: 1-696
Cow position: chrX:11148544-11147832 (view UCSC Genome Browser custom track)
Alignm length: 716
Alignm identity: 546
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 60

Conread position: 1-696
Cow position: chrX:11422661-11423372 (view UCSC Genome Browser custom track)
Alignm length: 714
Alignm identity: 537
Alignm E-value: 0
Alignm gaps (pig, cow): 300, 261

Conread position: 1-696
Cow position: chrX:13075906-13075202 (view UCSC Genome Browser custom track)
Alignm length: 712
Alignm identity: 535
Alignm E-value: 0
Alignm gaps (pig, cow): 300, 279

Conread position: 1-696
Cow position: chrX:13096481-13095763 (view UCSC Genome Browser custom track)
Alignm length: 724
Alignm identity: 539
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 291

Conread position: 1-696
Cow position: chrX:14595637-14596348 (view UCSC Genome Browser custom track)
Alignm length: 717
Alignm identity: 549
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 104

Conread position: 1-696
Cow position: chrX:16276437-16277150 (view UCSC Genome Browser custom track)
Alignm length: 715
Alignm identity: 542
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 446

Conread position: 1-696
Cow position: chrX:16362333-16361619 (view UCSC Genome Browser custom track)
Alignm length: 718
Alignm identity: 536
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 62

Conread position: 1-696
Cow position: chrX:16811652-16810946 (view UCSC Genome Browser custom track)
Alignm length: 712
Alignm identity: 531
Alignm E-value: 0
Alignm gaps (pig, cow): 292, 106

Conread position: 1-696
Cow position: chrX:21490954-21491661 (view UCSC Genome Browser custom track)
Alignm length: 726
Alignm identity: 545
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 109

Conread position: 1-696
Cow position: chrX:28585770-28586482 (view UCSC Genome Browser custom track)
Alignm length: 714
Alignm identity: 531
Alignm E-value: 0
Alignm gaps (pig, cow): 300, 403

Conread position: 1-696
Cow position: chrX:29793243-29792533 (view UCSC Genome Browser custom track)
Alignm length: 721
Alignm identity: 543
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 144

Conread position: 1-696
Cow position: chrX:30011789-30012500 (view UCSC Genome Browser custom track)
Alignm length: 714
Alignm identity: 530
Alignm E-value: 0
Alignm gaps (pig, cow): 300, 371

Conread position: 1-696
Cow position: chrX:30201941-30201236 (view UCSC Genome Browser custom track)
Alignm length: 711
Alignm identity: 533
Alignm E-value: 0
Alignm gaps (pig, cow): 473, 295

Conread position: 1-696
Cow position: chrX:41850408-41849723 (view UCSC Genome Browser custom track)
Alignm length: 708
Alignm identity: 543
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 40

Conread position: 1-697
Cow position: chrX:36136771-36136072 (view UCSC Genome Browser custom track)
Alignm length: 713
Alignm identity: 564
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 189

Conread position: 2-373
Cow position: chrX:29852773-29852399 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 79

Conread position: 2-693
Cow position: chrX:28650761-28650071 (view UCSC Genome Browser custom track)
Alignm length: 710
Alignm identity: 527
Alignm E-value: 0
Alignm gaps (pig, cow): 240, 121

Conread position: 2-694
Cow position: chrX:5296757-5296059 (view UCSC Genome Browser custom track)
Alignm length: 711
Alignm identity: 541
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 150

Conread position: 2-696
Cow position: chrX:2858583-2857876 (view UCSC Genome Browser custom track)
Alignm length: 714
Alignm identity: 542
Alignm E-value: 0
Alignm gaps (pig, cow): 299, 78

Conread position: 2-696
Cow position: chrX:16780096-16780783 (view UCSC Genome Browser custom track)
Alignm length: 722
Alignm identity: 529
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 110

Conread position: 9-694
Cow position: chrX:27593191-27592491 (view UCSC Genome Browser custom track)
Alignm length: 707
Alignm identity: 559
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 162

Conread position: 20-693
Cow position: chrX:29949789-29949113 (view UCSC Genome Browser custom track)
Alignm length: 697
Alignm identity: 529
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 37

Conread position: 23-696
Cow position: chrX:37014935-37015617 (view UCSC Genome Browser custom track)
Alignm length: 692
Alignm identity: 526
Alignm E-value: 0
Alignm gaps (pig, cow): 278, 226

Conread position: 29-314
Cow position: chrX:16041377-16041082 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 212
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 76, 102

Conread position: 29-687
Cow position: chrX:971601-972266 (view UCSC Genome Browser custom track)
Alignm length: 680
Alignm identity: 540
Alignm E-value: 0
Alignm gaps (pig, cow): 444, 131

Conread position: 47-696
Cow position: chrX:30069009-30068341 (view UCSC Genome Browser custom track)
Alignm length: 683
Alignm identity: 507
Alignm E-value: 0
Alignm gaps (pig, cow): 250, 77

Conread position: 73-692
Cow position: chrX:15600024-15600642 (view UCSC Genome Browser custom track)
Alignm length: 636
Alignm identity: 486
Alignm E-value: 0
Alignm gaps (pig, cow): 396, 9

Conread position: 88-696
Cow position: chrX:21341269-21341904 (view UCSC Genome Browser custom track)
Alignm length: 638
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 290

Conread position: 90-696
Cow position: chrX:2815602-2814982 (view UCSC Genome Browser custom track)
Alignm length: 626
Alignm identity: 484
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 184

Conread position: 119-696
Cow position: chrX:26399219-26398625 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 41

Conread position: 124-696
Cow position: chrX:28521682-28521104 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 441, 242

Conread position: 134-696
Cow position: chrX:18451902-18452482 (view UCSC Genome Browser custom track)
Alignm length: 581
Alignm identity: 458
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 0

Conread position: 143-696
Cow position: chrX:20035470-20034900 (view UCSC Genome Browser custom track)
Alignm length: 572
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 490

Conread position: 164-693
Cow position: chrX:2535116-2534585 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 298, 350

Conread position: 170-696
Cow position: chrX:24771904-24771361 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 299

Conread position: 204-696
Cow position: chrX:13447834-13447325 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 220

Conread position: 291-696
Cow position: chrX:12667182-12667617 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 146

Conread position: 293-694
Cow position: chrX:27495795-27496209 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 224

Conread position: 307-692
Cow position: chrX:16700797-16701188 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 50

Conread position: 337-696
Cow position: chrX:37957924-37957554 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 17

Conread position: 355-696
Cow position: chrX:37850276-37850632 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 0

Conread position: 357-708
Cow position: chrX:32327315-32327675 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 31

Conread position: 378-696
Cow position: chrX:11463879-11463546 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 0

Conread position: 383-692
Cow position: chrX:21224647-21224969 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 82

Conread position: 402-696
Cow position: chrX:6241239-6240933 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 22

Conread position: 404-696
Cow position: chrX:30436038-30436345 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 0

Conread position: 413-696
Cow position: chrX:45419035-45418747 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 11

Conread position: 421-696
Cow position: chrX:28664608-28664896 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 28

Conread position: 424-696
Cow position: chrX:2977878-2977591 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 0

Conread position: 445-696
Cow position: chrX:29096091-29095825 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 464-696
Cow position: chrX:42477559-42477314 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 0

Conread position: 467-696
Cow position: chrX:21791875-21792115 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 168
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 98, 27

Conread position: 516-696
Cow position: chrX:1942058-1941865 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 153
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 49, 0

Conread position: 541-694
Cow position: chrX:11459506-11459340 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 125
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 24, 0

Show alignments to all cow chromosomes.