Cow genome map

Conread name: Spl1-SPL01H060052

Conread position: 1-136
Cow position:
Alignm length: 139
Alignm identity: 105
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 69, 0

Conread position: 1-137
Cow position:
Alignm length: 141
Alignm identity: 106
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 25, 0

Conread position: 1-148
Cow position:
Alignm length: 151
Alignm identity: 119
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 69, 0

Conread position: 1-153
Cow position:
Alignm length: 157
Alignm identity: 117
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 68, 0

Conread position: 1-164
Cow position:
Alignm length: 168
Alignm identity: 128
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 89, 22

Conread position: 1-164
Cow position:
Alignm length: 168
Alignm identity: 133
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 68, 0

Conread position: 1-173
Cow position:
Alignm length: 176
Alignm identity: 132
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 68, 114

Conread position: 1-186
Cow position:
Alignm length: 191
Alignm identity: 141
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 68, 172

Conread position: 1-187
Cow position:
Alignm length: 193
Alignm identity: 139
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 68, 182

Conread position: 1-206
Cow position:
Alignm length: 210
Alignm identity: 152
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 64, 171

Conread position: 1-206
Cow position:
Alignm length: 210
Alignm identity: 155
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 68, 171

Conread position: 1-206
Cow position:
Alignm length: 211
Alignm identity: 158
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 70, 15

Conread position: 1-206
Cow position:
Alignm length: 209
Alignm identity: 153
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 69, 170

Conread position: 1-206
Cow position:
Alignm length: 210
Alignm identity: 153
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 68, 171

Conread position: 1-206
Cow position:
Alignm length: 210
Alignm identity: 152
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 68, 10

Conread position: 1-207
Cow position:
Alignm length: 212
Alignm identity: 151
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 58, 130

Conread position: 1-221
Cow position:
Alignm length: 224
Alignm identity: 165
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 68, 16

Conread position: 1-255
Cow position:
Alignm length: 256
Alignm identity: 173
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 146, 89

Conread position: 1-258
Cow position:
Alignm length: 263
Alignm identity: 192
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 68, 181

Conread position: 1-261
Cow position:
Alignm length: 266
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 181

Conread position: 1-262
Cow position:
Alignm length: 266
Alignm identity: 185
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 68, 171

Conread position: 1-266
Cow position:
Alignm length: 271
Alignm identity: 177
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 68, 41

Conread position: 1-266
Cow position:
Alignm length: 271
Alignm identity: 195
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 68, 105

Conread position: 1-272
Cow position:
Alignm length: 279
Alignm identity: 199
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 70, 47

Conread position: 1-272
Cow position:
Alignm length: 276
Alignm identity: 192
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 68, 186

Conread position: 1-272
Cow position:
Alignm length: 276
Alignm identity: 196
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 76, 42

Conread position: 1-272
Cow position:
Alignm length: 279
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 188

Conread position: 1-272
Cow position:
Alignm length: 274
Alignm identity: 196
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 141, 69

Conread position: 1-272
Cow position:
Alignm length: 275
Alignm identity: 205
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 68, 94

Conread position: 1-272
Cow position:
Alignm length: 286
Alignm identity: 204
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 68, 223

Conread position: 1-272
Cow position:
Alignm length: 276
Alignm identity: 192
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 68, 125

Conread position: 1-272
Cow position:
Alignm length: 277
Alignm identity: 191
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 20, 171

Conread position: 1-272
Cow position:
Alignm length: 280
Alignm identity: 196
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 69, 173

Conread position: 1-272
Cow position:
Alignm length: 276
Alignm identity: 192
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 76, 167

Conread position: 1-272
Cow position:
Alignm length: 275
Alignm identity: 193
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 64, 33

Conread position: 1-286
Cow position:
Alignm length: 291
Alignm identity: 203
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 69, 187

Conread position: 1-288
Cow position:
Alignm length: 296
Alignm identity: 213
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 68, 169

Conread position: 1-295
Cow position:
Alignm length: 299
Alignm identity: 216
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 68, 125

Conread position: 1-295
Cow position:
Alignm length: 300
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 171

Conread position: 1-295
Cow position:
Alignm length: 300
Alignm identity: 209
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 81, 32

Conread position: 1-297
Cow position:
Alignm length: 301
Alignm identity: 215
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 64, 171

Conread position: 1-297
Cow position:
Alignm length: 298
Alignm identity: 200
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 145, 88

Conread position: 1-302
Cow position:
Alignm length: 305
Alignm identity: 214
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 146, 16

Conread position: 1-303
Cow position:
Alignm length: 308
Alignm identity: 209
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 68, 171

Conread position: 1-303
Cow position:
Alignm length: 309
Alignm identity: 217
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 68, 140

Conread position: 1-303
Cow position:
Alignm length: 313
Alignm identity: 225
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 68, 181

Conread position: 1-304
Cow position:
Alignm length: 311
Alignm identity: 209
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 81, 174

Conread position: 1-307
Cow position:
Alignm length: 311
Alignm identity: 211
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 68, 171

Conread position: 1-307
Cow position:
Alignm length: 312
Alignm identity: 217
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 68, 171

Conread position: 1-307
Cow position:
Alignm length: 312
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 187

Conread position: 1-307
Cow position:
Alignm length: 311
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 171

Conread position: 1-307
Cow position:
Alignm length: 312
Alignm identity: 214
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 70, 49

Conread position: 1-307
Cow position:
Alignm length: 312
Alignm identity: 213
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 70, 49

Conread position: 1-307
Cow position:
Alignm length: 311
Alignm identity: 221
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 81, 52

Conread position: 1-307
Cow position:
Alignm length: 312
Alignm identity: 220
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 68, 167

Conread position: 1-307
Cow position:
Alignm length: 311
Alignm identity: 220
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 81, 47

Conread position: 1-307
Cow position:
Alignm length: 311
Alignm identity: 211
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 63, 171

Conread position: 1-307
Cow position:
Alignm length: 311
Alignm identity: 217
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 81, 171

Conread position: 1-307
Cow position:
Alignm length: 320
Alignm identity: 217
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 85, 47

Conread position: 1-307
Cow position:
Alignm length: 311
Alignm identity: 210
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 68, 171

Conread position: 1-307
Cow position:
Alignm length: 312
Alignm identity: 214
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 68, 172

Conread position: 1-307
Cow position:
Alignm length: 312
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 171

Conread position: 1-307
Cow position:
Alignm length: 311
Alignm identity: 217
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 68, 167

Conread position: 1-307
Cow position:
Alignm length: 308
Alignm identity: 209
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 149, 39

Conread position: 1-307
Cow position:
Alignm length: 315
Alignm identity: 211
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 68, 174

Conread position: 1-307
Cow position:
Alignm length: 315
Alignm identity: 213
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 58, 174

Conread position: 1-308
Cow position:
Alignm length: 312
Alignm identity: 214
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 81, 171

Conread position: 1-308
Cow position:
Alignm length: 312
Alignm identity: 214
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 81, 10

Conread position: 1-308
Cow position:
Alignm length: 312
Alignm identity: 213
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 68, 171

Conread position: 1-308
Cow position:
Alignm length: 311
Alignm identity: 215
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 146, 77

Conread position: 1-308
Cow position:
Alignm length: 313
Alignm identity: 211
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 69, 47

Conread position: 1-308
Cow position:
Alignm length: 312
Alignm identity: 212
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 68, 171

Conread position: 1-308
Cow position:
Alignm length: 312
Alignm identity: 218
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 68, 171

Conread position: 1-308
Cow position:
Alignm length: 312
Alignm identity: 215
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 68, 168

Conread position: 1-308
Cow position:
Alignm length: 313
Alignm identity: 212
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 68, 171

Conread position: 1-308
Cow position:
Alignm length: 312
Alignm identity: 216
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 68, 171

Conread position: 1-308
Cow position:
Alignm length: 312
Alignm identity: 213
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 68, 171

Conread position: 1-308
Cow position:
Alignm length: 312
Alignm identity: 217
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 65, 171

Conread position: 1-308
Cow position:
Alignm length: 312
Alignm identity: 213
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 68, 171

Conread position: 1-308
Cow position:
Alignm length: 313
Alignm identity: 211
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 49, 42

Conread position: 1-308
Cow position:
Alignm length: 312
Alignm identity: 208
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 68, 114

Conread position: 1-308
Cow position:
Alignm length: 312
Alignm identity: 211
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 68, 171

Conread position: 1-308
Cow position:
Alignm length: 319
Alignm identity: 210
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 63, 284

Conread position: 1-308
Cow position:
Alignm length: 313
Alignm identity: 220
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 69, 172

Conread position: 1-308
Cow position:
Alignm length: 313
Alignm identity: 214
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 20, 172

Conread position: 1-309
Cow position:
Alignm length: 313
Alignm identity: 213
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 68, 171

Conread position: 1-317
Cow position:
Alignm length: 321
Alignm identity: 217
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 68, 171

Conread position: 1-321
Cow position:
Alignm length: 333
Alignm identity: 221
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 69, 167

Conread position: 1-321
Cow position:
Alignm length: 323
Alignm identity: 224
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 76, 111

Conread position: 1-328
Cow position:
Alignm length: 335
Alignm identity: 237
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 68, 168

Conread position: 1-336
Cow position:
Alignm length: 342
Alignm identity: 237
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 71, 24

Conread position: 1-360
Cow position:
Alignm length: 366
Alignm identity: 225
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 68, 181

Conread position: 2-303
Cow position:
Alignm length: 307
Alignm identity: 218
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 66, 178

Conread position: 2-308
Cow position:
Alignm length: 310
Alignm identity: 215
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 77, 36

Conread position: 2-316
Cow position:
Alignm length: 319
Alignm identity: 215
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 67, 170

Conread position: 6-136
Cow position:
Alignm length: 133
Alignm identity: 104
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 64, 0

Conread position: 6-275
Cow position:
Alignm length: 274
Alignm identity: 190
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 76, 165

Conread position: 6-301
Cow position:
Alignm length: 300
Alignm identity: 208
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 76, 181

Conread position: 6-307
Cow position:
Alignm length: 305
Alignm identity: 215
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 140, 86

Conread position: 6-308
Cow position:
Alignm length: 309
Alignm identity: 220
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 59, 161

Conread position: 7-272
Cow position:
Alignm length: 270
Alignm identity: 195
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 63, 169

Conread position: 7-291
Cow position:
Alignm length: 303
Alignm identity: 212
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 63, 224

Conread position: 8-264
Cow position:
Alignm length: 263
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 179

Conread position: 8-303
Cow position:
Alignm length: 298
Alignm identity: 200
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 142, 111

Conread position: 8-303
Cow position:
Alignm length: 303
Alignm identity: 215
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 60, 157

Conread position: 8-304
Cow position:
Alignm length: 305
Alignm identity: 214
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 66, 26

Conread position: 8-308
Cow position:
Alignm length: 303
Alignm identity: 216
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 140, 70

Conread position: 8-311
Cow position:
Alignm length: 306
Alignm identity: 208
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 142, 71

Conread position: 9-287
Cow position:
Alignm length: 284
Alignm identity: 205
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 60, 163

Conread position: 11-316
Cow position:
Alignm length: 311
Alignm identity: 222
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 66, 178

Conread position: 17-272
Cow position:
Alignm length: 260
Alignm identity: 173
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 109, 124

Conread position: 17-297
Cow position:
Alignm length: 287
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 21

Conread position: 17-303
Cow position:
Alignm length: 296
Alignm identity: 212
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 48, 185

Conread position: 17-308
Cow position:
Alignm length: 296
Alignm identity: 199
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 52, 155

Conread position: 17-309
Cow position:
Alignm length: 298
Alignm identity: 207
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 67, 153

Conread position: 17-309
Cow position:
Alignm length: 298
Alignm identity: 211
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 55, 101

Conread position: 17-333
Cow position:
Alignm length: 325
Alignm identity: 212
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 55, 21

Conread position: 31-266
Cow position:
Alignm length: 244
Alignm identity: 181
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 38, 191

Conread position: 42-264
Cow position:
Alignm length: 227
Alignm identity: 163
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 28, 128

Conread position: 47-307
Cow position:
Alignm length: 265
Alignm identity: 188
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 35, 11

Conread position: 49-264
Cow position:
Alignm length: 221
Alignm identity: 165
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 21, 138

Conread position: 49-270
Cow position:
Alignm length: 223
Alignm identity: 162
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 169, 39

Conread position: 49-312
Cow position:
Alignm length: 268
Alignm identity: 191
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 21, 122

Conread position: 52-306
Cow position:
Alignm length: 262
Alignm identity: 188
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 18, 135

Conread position: 55-307
Cow position:
Alignm length: 256
Alignm identity: 172
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 32, 27

Conread position: 68-296
Cow position:
Alignm length: 231
Alignm identity: 164
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 81, 31

Conread position: 78-307
Cow position:
Alignm length: 231
Alignm identity: 164
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 73, 106

Conread position: 87-272
Cow position:
Alignm length: 189
Alignm identity: 140
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 71, 34

Conread position: 87-286
Cow position:
Alignm length: 202
Alignm identity: 148
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 131, 96

Conread position: 88-311
Cow position:
Alignm length: 227
Alignm identity: 157
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 21, 97

Conread position: 99-299
Cow position:
Alignm length: 202
Alignm identity: 148
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 51, 86

Conread position: 100-309
Cow position:
Alignm length: 214
Alignm identity: 146
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 51, 57

Conread position: 104-308
Cow position:
Alignm length: 206
Alignm identity: 141
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 45, 65

Conread position: 109-272
Cow position:
Alignm length: 168
Alignm identity: 123
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 5, 22

Conread position: 115-297
Cow position:
Alignm length: 185
Alignm identity: 134
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 35, 54

Conread position: 115-308
Cow position:
Alignm length: 199
Alignm identity: 142
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 33, 102

Conread position: 126-307
Cow position:
Alignm length: 183
Alignm identity: 130
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 92, 42

Show alignments to all cow chromosomes.