Cow genome map

Conread name: Spl1-SPL01H060052

Conread position: 1-137
Cow position: chr26:2244274-2244135 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 106
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 60, 0

Conread position: 1-147
Cow position: chr26:1637525-1637379 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 112
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 89, 113

Conread position: 1-164
Cow position: chr26:1088416-1088583 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 130
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 81, 0

Conread position: 1-206
Cow position: chr26:3157347-3157555 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 156
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 68, 171

Conread position: 1-206
Cow position: chr26:3199603-3199811 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 155
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 68, 171

Conread position: 1-206
Cow position: chr26:3537354-3537562 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 153
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 68, 176

Conread position: 1-206
Cow position: chr26:3862846-3862639 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 150
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 64, 170

Conread position: 1-249
Cow position: chr26:30625381-30625131 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 178
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 61, 165

Conread position: 1-263
Cow position: chr26:12662500-12662245 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 194
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 69, 54

Conread position: 1-263
Cow position: chr26:34030793-34031050 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 182
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 43, 49

Conread position: 1-264
Cow position: chr26:23889644-23889905 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 188
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 64, 168

Conread position: 1-270
Cow position: chr26:24238933-24239203 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 185
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 146, 89

Conread position: 1-272
Cow position: chr26:3700203-3700465 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 182
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 107, 81

Conread position: 1-272
Cow position: chr26:7459732-7459456 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 185
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 68, 127

Conread position: 1-272
Cow position: chr26:15199260-15199532 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 190
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 68, 105

Conread position: 1-272
Cow position: chr26:20019333-20019607 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 191
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 68, 171

Conread position: 1-272
Cow position: chr26:23590927-23591201 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 190
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 74, 186

Conread position: 1-272
Cow position: chr26:30594397-30594123 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 188
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 68, 171

Conread position: 1-272
Cow position: chr26:35423731-35424003 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 196
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 81, 115

Conread position: 1-288
Cow position: chr26:6429817-6430103 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 200
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 68, 171

Conread position: 1-294
Cow position: chr26:33950138-33949845 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 196
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 71, 115

Conread position: 1-299
Cow position: chr26:12126319-12126043 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 204
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 33, 0

Conread position: 1-299
Cow position: chr26:26238234-26238529 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 47

Conread position: 1-300
Cow position: chr26:386912-387210 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 214
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 69, 171

Conread position: 1-300
Cow position: chr26:35191315-35191018 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 214
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 68, 16

Conread position: 1-302
Cow position: chr26:11369929-11370229 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 208
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 74, 37

Conread position: 1-303
Cow position: chr26:2201762-2202066 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 208
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 90, 114

Conread position: 1-303
Cow position: chr26:8084058-8084364 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 210
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 64, 171

Conread position: 1-303
Cow position: chr26:8739185-8738879 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 208
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 68, 171

Conread position: 1-303
Cow position: chr26:14488023-14487728 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 215
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 91, 15

Conread position: 1-303
Cow position: chr26:18928514-18928813 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 206
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 148, 81

Conread position: 1-304
Cow position: chr26:9835700-9836010 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 218
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 49, 189

Conread position: 1-304
Cow position: chr26:17327394-17327704 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 218
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 68, 174

Conread position: 1-307
Cow position: chr26:9115271-9115575 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 210
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 65, 171

Conread position: 1-307
Cow position: chr26:9558648-9558333 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 222
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 68, 171

Conread position: 1-307
Cow position: chr26:12585306-12585001 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 207
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 81, 171

Conread position: 1-307
Cow position: chr26:13806795-13806492 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 215
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 68, 171

Conread position: 1-307
Cow position: chr26:17429243-17428938 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 171

Conread position: 1-307
Cow position: chr26:18857352-18857652 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 204
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 68, 151

Conread position: 1-307
Cow position: chr26:22831804-22831502 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 218
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 81, 57

Conread position: 1-307
Cow position: chr26:26286091-26286397 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 213
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 68, 169

Conread position: 1-308
Cow position: chr26:1343063-1342757 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 214
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 68, 171

Conread position: 1-308
Cow position: chr26:1346762-1346456 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 204
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 81, 171

Conread position: 1-308
Cow position: chr26:1390214-1390520 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 206
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 68, 171

Conread position: 1-308
Cow position: chr26:1620887-1621185 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 212
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 43, 53

Conread position: 1-308
Cow position: chr26:3186991-3187294 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 211
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 110, 93

Conread position: 1-308
Cow position: chr26:3564807-3564501 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 207
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 68, 171

Conread position: 1-308
Cow position: chr26:4729092-4728787 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 207
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 68, 170

Conread position: 1-308
Cow position: chr26:7559384-7559078 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 211
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 68, 171

Conread position: 1-308
Cow position: chr26:13183542-13183848 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 215
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 68, 171

Conread position: 1-308
Cow position: chr26:15145726-15146032 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 211
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 68, 171

Conread position: 1-308
Cow position: chr26:18804138-18803831 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 213
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 69, 172

Conread position: 1-308
Cow position: chr26:26611688-26611994 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 213
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 68, 171

Conread position: 1-308
Cow position: chr26:34265196-34265502 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 210
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 68, 171

Conread position: 1-308
Cow position: chr26:35122010-35121705 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 211
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 68, 171

Conread position: 1-308
Cow position: chr26:35560829-35560525 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 215
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 64, 171

Conread position: 1-310
Cow position: chr26:5679762-5680078 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 217
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 68, 268

Conread position: 1-316
Cow position: chr26:6843988-6843668 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 171

Conread position: 1-317
Cow position: chr26:22691622-22691932 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 223
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 68, 167

Conread position: 1-317
Cow position: chr26:28706826-28706516 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 218
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 68, 114

Conread position: 3-296
Cow position: chr26:9100746-9100466 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 201
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 69, 99

Conread position: 3-303
Cow position: chr26:3833268-3833572 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 206
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 66, 166

Conread position: 6-304
Cow position: chr26:17393658-17393364 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 212
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 63, 104

Conread position: 6-307
Cow position: chr26:9694559-9694261 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 211
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 63, 166

Conread position: 6-308
Cow position: chr26:29433469-29433770 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 217
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 59, 166

Conread position: 8-186
Cow position: chr26:14291041-14291211 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 131
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 140, 70

Conread position: 8-206
Cow position: chr26:4548847-4549050 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 156
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 61, 139

Conread position: 8-272
Cow position: chr26:4324475-4324215 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 190
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 61, 164

Conread position: 8-272
Cow position: chr26:25393025-25393294 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 192
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 62, 174

Conread position: 8-308
Cow position: chr26:13773290-13773589 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 179

Conread position: 8-321
Cow position: chr26:27987351-27987047 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 217
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 19, 147

Conread position: 9-140
Cow position: chr26:6321347-6321479 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 101
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 60, 0

Conread position: 9-272
Cow position: chr26:8308524-8308247 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 184
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 60, 0

Conread position: 9-302
Cow position: chr26:21823348-21823070 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 206
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 18, 74

Conread position: 11-307
Cow position: chr26:3230710-3231004 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 199
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 58, 161

Conread position: 14-202
Cow position: chr26:35123039-35123231 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 108
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 50, 0

Conread position: 17-263
Cow position: chr26:11269470-11269719 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 181
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 55, 85

Conread position: 17-263
Cow position: chr26:16781422-16781672 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 187
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 52, 166

Conread position: 17-272
Cow position: chr26:9063335-9063590 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 186
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 69, 31

Conread position: 17-272
Cow position: chr26:10490492-10490745 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 178
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 61, 114

Conread position: 17-308
Cow position: chr26:10699250-10698972 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 201
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 60, 72

Conread position: 17-318
Cow position: chr26:31138698-31138395 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 218
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 60, 26

Conread position: 18-270
Cow position: chr26:17288059-17288315 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 164

Conread position: 18-272
Cow position: chr26:2604676-2604419 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 178
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 54, 20

Conread position: 20-263
Cow position: chr26:19795304-19795550 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 167

Conread position: 28-272
Cow position: chr26:30725659-30725411 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 181
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 42, 160

Conread position: 29-308
Cow position: chr26:17169090-17169368 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 193
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 40, 140

Conread position: 38-316
Cow position: chr26:2670548-2670264 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 196
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 32, 80

Conread position: 49-265
Cow position: chr26:21858875-21859083 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 148
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 39, 0

Conread position: 53-261
Cow position: chr26:21350781-21350996 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 165
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 19, 138

Conread position: 54-304
Cow position: chr26:6476392-6476138 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 185
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 18, 133

Conread position: 68-310
Cow position: chr26:15516968-15516733 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 164
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 81, 16

Conread position: 69-299
Cow position: chr26:16905225-16905445 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 164
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 81, 55

Conread position: 69-324
Cow position: chr26:3184904-3185171 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 183
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 65, 168

Conread position: 89-272
Cow position: chr26:2770820-2770640 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 134
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 129, 55

Conread position: 98-266
Cow position: chr26:6098232-6098064 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 125
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 53, 86

Conread position: 101-300
Cow position: chr26:16719809-16720005 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 153
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 49, 83

Conread position: 103-270
Cow position: chr26:12652576-12652408 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 127
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 18, 84

Conread position: 117-324
Cow position: chr26:14897439-14897650 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 148
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 33, 52

Conread position: 118-272
Cow position: chr26:8653772-8653620 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 124
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 30, 46

Conread position: 512-649
Cow position: chr26:11361811-11361676 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 104
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 37, 0

Show alignments to all cow chromosomes.