Cow genome map
| Conread name: | Spl1-SPL01H100058 |
| Conread position: | 5-172 |
| Cow position: | chr11:53773033-53772864 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 40, 127 |
| Conread position: | 412-701 |
| Cow position: | chr11:43062644-43062351 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 203 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 80, 47 |
| Conread position: | 413-622 |
| Cow position: | chr11:19722861-19722655 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 20, 56 |
| Conread position: | 415-689 |
| Cow position: | chr11:26085592-26085319 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 196 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 18, 64 |
| Conread position: | 415-697 |
| Cow position: | chr11:74915966-74915679 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 206 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 416-697 |
| Cow position: | chr11:20555900-20555620 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 202 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 15, 59 |
| Conread position: | 417-701 |
| Cow position: | chr11:16821545-16821274 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 203 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 14, 80 |
| Conread position: | 417-701 |
| Cow position: | chr11:29966159-29965861 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 197 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 425-567 |
| Cow position: | chr11:81485281-81485138 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 8, 49 |
| Conread position: | 425-701 |
| Cow position: | chr11:69192629-69192905 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 10, 235 |
| Conread position: | 432-599 |
| Cow position: | chr11:62751665-62751500 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 438-599 |
| Cow position: | chr11:27644027-27644188 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 125 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 47, 30 |
| Conread position: | 441-701 |
| Cow position: | chr11:34443488-34443754 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 44, 34 |
| Conread position: | 442-701 |
| Cow position: | chr11:16210610-16210336 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 472-702 |
| Cow position: | chr11:62035096-62034870 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 169, 6 |
| Conread position: | 487-697 |
| Cow position: | chr11:55386319-55386531 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 145, 74 |
| Conread position: | 488-701 |
| Cow position: | chr11:78330573-78330792 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 500-679 |
| Cow position: | chr11:62702028-62702212 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 541-698 |
| Cow position: | chr11:16102266-16102106 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 90, 25 |
Show alignments to all cow chromosomes.