Cow genome map
| Conread name: | Spl1-SPL01H100058 |
| Conread position: | 1-172 |
| Cow position: | chr12:20317102-20317274 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 145 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 6-165 |
| Cow position: | chr12:9988051-9988210 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 368-698 |
| Cow position: | chr12:6114009-6113689 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 218 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 22, 49 |
| Conread position: | 371-622 |
| Cow position: | chr12:47811847-47812096 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 29, 67 |
| Conread position: | 408-701 |
| Cow position: | chr12:6250658-6250946 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 223, 17 |
| Conread position: | 409-599 |
| Cow position: | chr12:45065034-45065228 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 410-565 |
| Cow position: | chr12:791241-791084 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 23, 29 |
| Conread position: | 410-701 |
| Cow position: | chr12:26039649-26039346 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 413-683 |
| Cow position: | chr12:2238108-2237842 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 20, 73 |
| Conread position: | 415-702 |
| Cow position: | chr12:36587792-36587504 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 193 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 18, 109 |
| Conread position: | 417-700 |
| Cow position: | chr12:18056427-18056709 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 193 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 16, 103 |
| Conread position: | 426-589 |
| Cow position: | chr12:19394965-19395127 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 7, 60 |
| Conread position: | 433-698 |
| Cow position: | chr12:47786357-47786615 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 184 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 196, 55 |
| Conread position: | 441-698 |
| Cow position: | chr12:9598323-9598583 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 97, 44 |
| Conread position: | 441-698 |
| Cow position: | chr12:29295817-29295556 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 28, 78 |
| Conread position: | 445-690 |
| Cow position: | chr12:16723086-16722835 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 172 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 40, 0 |
Show alignments to all cow chromosomes.