Cow genome map


           Conread name:
           Spl1-SPL01H100058
        

               Conread position:
               2-167
               

               Cow position:
               chr16:55151294-55151133 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               20-165
               

               Cow position:
               chr16:37454381-37454526 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               124
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               39, 31
               

               Conread position:
               408-579
               

               Cow position:
               chr16:34535059-34534887 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               410-702
               

               Cow position:
               chr16:52484484-52484186 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               199
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               23, 181
               

               Conread position:
               417-679
               

               Cow position:
               chr16:13356303-13356040 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               186
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               18, 29
               

               Conread position:
               417-702
               

               Cow position:
               chr16:30547575-30547289 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               192
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               26, 154
               

               Conread position:
               422-678
               

               Cow position:
               chr16:5703250-5703509 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               11, 114
               

               Conread position:
               429-628
               

               Cow position:
               chr16:51232134-51232328 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               143
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               432-686
               

               Cow position:
               chr16:53521219-53521488 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               56, 223
               

               Conread position:
               455-595
               

               Cow position:
               chr16:45767012-45766871 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               104
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               541-698
               

               Cow position:
               chr16:54724920-54725081 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               117
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               90, 0
               
Show alignments to all cow chromosomes.