Cow genome map


           Conread name:
           Spl1-SPL01H100058
        

               Conread position:
               2-167
               

               Cow position:
               chr17:17240486-17240651 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               6-167
               

               Cow position:
               chr17:36265754-36265915 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               137
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               38, 96
               

               Conread position:
               413-702
               

               Cow position:
               chr17:12779891-12779599 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               204
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               20, 221
               

               Conread position:
               417-679
               

               Cow position:
               chr17:25624567-25624824 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               16, 72
               

               Conread position:
               417-698
               

               Cow position:
               chr17:24907292-24907011 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               192
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               16, 21
               

               Conread position:
               434-620
               

               Cow position:
               chr17:5259004-5258813 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               145, 52
               

               Conread position:
               541-698
               

               Cow position:
               chr17:37440413-37440574 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               117
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               87, 0
               
Show alignments to all cow chromosomes.