Cow genome map


           Conread name:
           Spl1-SPL01H100058
        

               Conread position:
               366-701
               

               Cow position:
               chr18:16440144-16440456 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               222
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               372-680
               

               Cow position:
               chr18:1060678-1060370 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               212
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               52, 31
               

               Conread position:
               397-679
               

               Cow position:
               chr18:4328483-4328770 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               42, 46
               

               Conread position:
               403-691
               

               Cow position:
               chr18:14430880-14431176 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               212
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               30, 110
               

               Conread position:
               415-627
               

               Cow position:
               chr18:32320227-32320013 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               150
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               18, 108
               

               Conread position:
               448-614
               

               Cow position:
               chr18:28815032-28814862 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               479-702
               

               Cow position:
               chr18:27418886-27419112 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               27, 49
               

               Conread position:
               484-679
               

               Cow position:
               chr18:56124273-56124470 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               142
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               146, 0
               
Show alignments to all cow chromosomes.