Cow genome map


           Conread name:
           Spl1-SPL01H100058
        

               Conread position:
               1-168
               

               Cow position:
               chr20:38123456-38123290 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               162, 0
               

               Conread position:
               404-698
               

               Cow position:
               chr20:32371765-32371469 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               200
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               31, 16
               

               Conread position:
               415-599
               

               Cow position:
               chr20:1894709-1894525 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               16, 83
               

               Conread position:
               421-684
               

               Cow position:
               chr20:14214732-14214989 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               15, 120
               

               Conread position:
               426-701
               

               Cow position:
               chr20:5917542-5917820 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               194
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               7, 56
               

               Conread position:
               426-701
               

               Cow position:
               chr20:6819610-6819894 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               195
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               432-699
               

               Cow position:
               chr20:9174669-9174936 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               192
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               166, 105
               

               Conread position:
               433-565
               

               Cow position:
               chr20:34121092-34121224 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               100
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               491-701
               

               Cow position:
               chr20:28487115-28486903 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               149
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               133, 46
               
Show alignments to all cow chromosomes.