Cow genome map


           Conread name:
           Spl1-SPL01H100058
        

               Conread position:
               4-165
               

               Cow position:
               chr22:32951895-32951728 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               25, 92
               

               Conread position:
               392-567
               

               Cow position:
               chr22:24675140-24674960 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               407-698
               

               Cow position:
               chr22:7964635-7964931 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               207
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               194, 13
               

               Conread position:
               411-698
               

               Cow position:
               chr22:44177013-44177300 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               23, 49
               

               Conread position:
               415-578
               

               Cow position:
               chr22:31563007-31563174 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               126
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               18, 104
               

               Conread position:
               415-681
               

               Cow position:
               chr22:35237994-35238260 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               16, 123
               

               Conread position:
               417-565
               

               Cow position:
               chr22:9219228-9219379 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               110
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               418-701
               

               Cow position:
               chr22:20463177-20463465 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               198
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               64, 15
               

               Conread position:
               421-568
               

               Cow position:
               chr22:26897918-26897771 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               12, 68
               

               Conread position:
               448-698
               

               Cow position:
               chr22:12028116-12027863 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               182, 9
               

               Conread position:
               462-701
               

               Cow position:
               chr22:15692929-15693170 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               103, 60
               

               Conread position:
               493-701
               

               Cow position:
               chr22:28806876-28807088 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               23, 30
               
Show alignments to all cow chromosomes.