Cow genome map
| Conread name: | Spl1-SPL01H100058 |
| Conread position: | 2-173 |
| Cow position: | chr3:16752800-16752960 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 130 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 5-173 |
| Cow position: | chr3:38346617-38346449 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 103, 159 |
| Conread position: | 6-168 |
| Cow position: | chr3:6897406-6897245 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 150, 118 |
| Conread position: | 19-165 |
| Cow position: | chr3:8923167-8923020 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 110 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 54-176 |
| Cow position: | chr3:35298804-35298925 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 103 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 109, 0 |
| Conread position: | 373-619 |
| Cow position: | chr3:60618829-60619082 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 169 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 378-680 |
| Cow position: | chr3:10044443-10044132 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 212 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 25, 31 |
| Conread position: | 409-602 |
| Cow position: | chr3:1748079-1748272 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 24, 79 |
| Conread position: | 413-701 |
| Cow position: | chr3:39918130-39917847 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 195 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 20, 76 |
| Conread position: | 416-701 |
| Cow position: | chr3:43839628-43839915 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 193 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 17, 223 |
| Conread position: | 421-680 |
| Cow position: | chr3:43973893-43974152 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 180 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 13, 81 |
| Conread position: | 422-701 |
| Cow position: | chr3:75505148-75504867 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 11, 19 |
| Conread position: | 423-680 |
| Cow position: | chr3:77649545-77649811 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 181 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 10, 72 |
| Conread position: | 426-701 |
| Cow position: | chr3:18467094-18466814 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 188 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 204, 0 |
| Conread position: | 432-698 |
| Cow position: | chr3:21052721-21052462 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 194 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 64, 100 |
| Conread position: | 442-686 |
| Cow position: | chr3:41756174-41756414 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 175 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 190, 89 |
| Conread position: | 443-653 |
| Cow position: | chr3:66266664-66266876 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 39, 18 |
| Conread position: | 462-675 |
| Cow position: | chr3:41565237-41565453 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 24, 74 |
| Conread position: | 464-681 |
| Cow position: | chr3:24201446-24201665 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 159 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 22, 69 |
| Conread position: | 479-701 |
| Cow position: | chr3:27346107-27345885 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.