Cow genome map


           Conread name:
           Spl1-SPL01H100058
        

               Conread position:
               2-165
               

               Cow position:
               chr4:61066059-61065892 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               105, 0
               

               Conread position:
               3-161
               

               Cow position:
               chr4:27540052-27539896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               4-171
               

               Cow position:
               chr4:59889176-59889342 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               159, 0
               

               Conread position:
               53-165
               

               Cow position:
               chr4:11898220-11898333 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               98
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               371-628
               

               Cow position:
               chr4:51910554-51910809 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               62, 24
               

               Conread position:
               415-697
               

               Cow position:
               chr4:43407155-43406866 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               192
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               416-701
               

               Cow position:
               chr4:40298158-40297870 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               24, 48
               

               Conread position:
               441-698
               

               Cow position:
               chr4:45687410-45687670 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               184
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               189, 165
               

               Conread position:
               462-701
               

               Cow position:
               chr4:24827272-24827028 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               20, 27
               

               Conread position:
               475-628
               

               Cow position:
               chr4:12257443-12257288 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               113
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               476-701
               

               Cow position:
               chr4:45697794-45697562 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               54, 11
               

               Conread position:
               489-678
               

               Cow position:
               chr4:49364700-49364509 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               113, 48
               
Show alignments to all cow chromosomes.