Cow genome map


           Conread name:
           Spl1-SPL01H100058
        

               Conread position:
               4-167
               

               Cow position:
               chr9:48773922-48774085 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               114
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               407-701
               

               Cow position:
               chr9:64421059-64421355 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               195
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               63, 10
               

               Conread position:
               407-702
               

               Cow position:
               chr9:30135405-30135699 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               26, 37
               

               Conread position:
               411-701
               

               Cow position:
               chr9:10733834-10733541 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               199
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               7, 174
               

               Conread position:
               417-698
               

               Cow position:
               chr9:39791568-39791287 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               17, 37
               

               Conread position:
               418-702
               

               Cow position:
               chr9:61358143-61357863 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               185
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               13, 69
               

               Conread position:
               425-700
               

               Cow position:
               chr9:30210121-30210396 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               183
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               206, 70
               

               Conread position:
               438-594
               

               Cow position:
               chr9:34145073-34145229 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               114
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               33, 49
               

               Conread position:
               453-701
               

               Cow position:
               chr9:32955179-32954925 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               167
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               464-701
               

               Cow position:
               chr9:5741870-5742112 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               479-702
               

               Cow position:
               chr9:43532793-43533020 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               17, 142
               

               Conread position:
               492-702
               

               Cow position:
               chr9:32727049-32726835 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               132, 115
               
Show alignments to all cow chromosomes.