Cow genome map
| Conread name: | Spl1-SPL01H100058 |
| Conread position: | 2-165 |
| Cow position: | chrX:6406812-6406651 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 4-161 |
| Cow position: | chrX:18455318-18455475 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 139, 116 |
| Conread position: | 401-701 |
| Cow position: | chrX:23907869-23908169 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 205 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 32, 5 |
| Conread position: | 406-698 |
| Cow position: | chrX:2374734-2375029 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 202 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 14, 154 |
| Conread position: | 409-701 |
| Cow position: | chrX:6029501-6029207 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 213 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 24, 77 |
| Conread position: | 414-592 |
| Cow position: | chrX:27719552-27719374 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 19, 84 |
| Conread position: | 414-599 |
| Cow position: | chrX:39434539-39434727 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 416-668 |
| Cow position: | chrX:398497-398238 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 417-599 |
| Cow position: | chrX:41408311-41408494 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 17, 70 |
| Conread position: | 417-698 |
| Cow position: | chrX:38533216-38533504 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 203 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 16, 109 |
| Conread position: | 417-701 |
| Cow position: | chrX:23118404-23118692 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 417-701 |
| Cow position: | chrX:25044207-25043922 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 14, 73 |
| Conread position: | 417-701 |
| Cow position: | chrX:30848399-30848112 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 16, 68 |
| Conread position: | 422-599 |
| Cow position: | chrX:40225824-40226003 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 12, 102 |
| Conread position: | 431-626 |
| Cow position: | chrX:8502456-8502646 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 142 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 12, 6 |
| Conread position: | 432-701 |
| Cow position: | chrX:27957913-27958183 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 198, 56 |
| Conread position: | 438-616 |
| Cow position: | chrX:36112132-36112310 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 44, 33 |
| Conread position: | 445-701 |
| Cow position: | chrX:40111605-40111344 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 44, 78 |
| Conread position: | 462-667 |
| Cow position: | chrX:13989386-13989187 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 179, 24 |
| Conread position: | 478-628 |
| Cow position: | chrX:15277589-15277436 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 123, 53 |
Show alignments to all cow chromosomes.